FC920739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 5.314e-64 Identity = 115/226 (50.88%), Postives = 167/226 (73.89%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V + ++D+ +L PG + ++ L++ ++ +P V+ M+V ++ Y IGGLD QIQE++EAVELPL PE + IGI+PPKGV+LYG PGTGKTLLAKAVA+ T+ATF+RVVGSEL+QKY+GDG KLVRE+F +A +PSI+FIDE+D++ +R + +G +RE+QRT+++LL ++DGFD R ++++I TNR + LDPA+LRPGR DR + P Sbjct: 105 FLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESIEVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMP 330
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS6A_YEAST (26S protease regulatory subunit 6A OS=Saccharomyces cerevisiae GN=RPT5 PE=1 SV=3) HSP 1 Score: 244.202 bits (622), Expect = 5.314e-64 Identity = 113/228 (49.56%), Postives = 167/228 (73.25%), Query Frame = 2 Query: 5 YVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFPISD 688 ++ ++ VD D+L+P + ++ ++ L E D V M+V++ P E+Y+D+GGLD QI+E+ EA+ LP+ + ++D+GI+ PKG ++YG PGTGKTLLA+A A T+ATFL++ +L+Q Y+G+G KLVR+ F +A + +P+I+FIDE+DA+GTKR+D+ G+RE+QRTMLELLNQLDGF S V+V+ TNR++ LDPALLR GR+DRKI+F P D Sbjct: 128 FLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSED 355
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 243.817 bits (621), Expect = 6.940e-64 Identity = 117/226 (51.77%), Postives = 163/226 (72.12%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 Y VG+ +E G + + K + L ++DP V++M VE+ P +Y+DIGG QI++I+E VELP+ HPE + +GI PPKGV+ YG PG+GKTL+A+AVAN T A F+RVVGSEL+QKY+G+G ++VRELF++A I+F DEIDA+G R+D G + E+QRTMLE+L QLDGFD+RG+++V++ TNR + LDPALLRPGR+DRK++F P Sbjct: 151 YVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLP 376
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 113/224 (50.45%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 8 VGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + S +D+ ++PG ++ ++ + +++ +L + DP+V M++ + P +Y++IGGL+ QI+E++E VELPL PE++ +IG++PPKGV+LYG PGTGKT+LAKAVA ++A F+ VV SE QK++G+G ++VRELF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGF+ +V++I TNRI+ LDPALLRPGR DR I+ P Sbjct: 82 VNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLP 305
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 113/224 (50.45%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 8 VGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + S +D+ ++PG ++ ++ + +++ +L + DP+V M++ + P +Y++IGGL+ QI+E++E VELPL PE++ +IG++PPKGV+LYG PGTGKT+LAKAVA ++A F+ VV SE QK++G+G ++VRELF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGF+ +V++I TNRI+ LDPALLRPGR DR I+ P Sbjct: 82 VNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLP 305
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 113/224 (50.45%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 8 VGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + S +D+ ++PG ++ ++ + +++ +L + DP+V M++ + P +Y++IGGL+ QI+E++E VELPL PE++ +IG++PPKGV+LYG PGTGKT+LAKAVA ++A F+ VV SE QK++G+G ++VRELF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGF+ +V++I TNRI+ LDPALLRPGR DR I+ P Sbjct: 82 VNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLP 305
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 113/224 (50.45%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 8 VGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + S +D+ ++PG ++ ++ + +++ +L + DP+V M++ + P +Y++IGGL+ QI+E++E VELPL PE++ +IG++PPKGV+LYG PGTGKT+LAKAVA ++A F+ VV SE QK++G+G ++VRELF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGF+ +V++I TNRI+ LDPALLRPGR DR I+ P Sbjct: 82 VNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLP 305
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 113/224 (50.45%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 8 VGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + S +D+ ++PG ++ ++ + +++ +L + DP+V M++ + P +Y++IGGL+ QI+E++E VELPL PE++ +IG++PPKGV+LYG PGTGKT+LAKAVA ++A F+ VV SE QK++G+G ++VRELF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGF+ +V++I TNRI+ LDPALLRPGR DR I+ P Sbjct: 82 VNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLP 305
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.063e-64 Identity = 113/224 (50.45%), Postives = 169/224 (75.45%), Query Frame = 2 Query: 8 VGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 V + S +D+ ++PG ++ ++ + +++ +L + DP+V M++ + P +Y++IGGL+ QI+E++E VELPL PE++ +IG++PPKGV+LYG PGTGKT+LAKAVA ++A F+ VV SE QK++G+G ++VRELF +A +PSI+FIDEIDA+G KR D + GEREIQRT+++LL +LDGF+ +V++I TNRI+ LDPALLRPGR DR I+ P Sbjct: 82 VNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLP 305
BLAST of FC920739 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 241.891 bits (616), Expect = 2.637e-63 Identity = 113/226 (50.00%), Postives = 165/226 (73.01%), Query Frame = 2 Query: 2 YYVGILSFVDKDQLEPGCAILMHNKLLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVQVILGTNRIESLDPALLRPGRIDRKIDFLFP 679 + V + V +E G + + + L ++DP V++M+VE+ P +Y+D+GG QI++++E VE PL HPE + ++GI+PPKGV+L+G PGTGKTL A+AVAN T A F+ V+GSEL+QKY+G+G ++VRELF +A ++F DEIDA+G R+D +GG+ E+QRTMLEL+NQLDGFD RG+++V++ TNR ++LDPAL+RPGR+DRKI+F P Sbjct: 121 FVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346 The following BLAST results are available for this feature:
BLAST of FC920739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 381
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920739 ID=FC920739; Name=FC920739; organism=Citrus clementina; type=EST; length=724bpback to top |