FC920741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: AL1A1_SHEEP (Retinal dehydrogenase 1 OS=Ovis aries GN=ALDH1A1 PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.638e-27 Identity = 66/155 (42.58%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 214 STAAVVEEPI-IPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVPGDGNTIFNFT 672 S++A+ + P + +Q YTK IN ++ + SGK FPV++P T E + V EGD ED+D+AV AR+AF G PW M ER R++ + ADLIE++ LA +E N GK + + ++ ++ L Y AGWADKI G T+P DGN F +T Sbjct: 2 SSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGN-FFTYT 155
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: AL1A1_BOVIN (Retinal dehydrogenase 1 OS=Bos taurus GN=ALDH1A1 PE=2 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.139e-27 Identity = 66/155 (42.58%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 214 STAAVVEEPI-IPPVQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVPGDGNTIFNFT 672 S++A+ + P + +Q YTK IN ++ + SGK FPV++P T E + V EGD ED+D+AV AR+AF G PW M ER R++ + ADLIE++ LA +E N GK + + ++ ++ L Y AGWADKI G T+P DGN F +T Sbjct: 2 SSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDHLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGN-FFTYT 155
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ALDH1_ELEED (Aldehyde dehydrogenase, cytosolic 1 OS=Elephantulus edwardii GN=ALDH1 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27 Identity = 62/141 (43.97%), Postives = 90/141 (63.83%), Query Frame = 1 Query: 253 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVPGDGNTIFNFT 672 ++I +TK IN ++ ++ SGKTFPV++P T E I V E D ED+D+AV AR+AF G PW M ER +++ + ADLIE++ LA LE+ N GK + + ++ ++ L Y AGWADKI G T+P DG F++T Sbjct: 16 IKIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSPWRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGE-FFSYT 155
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27 Identity = 62/151 (41.06%), Postives = 96/151 (63.58%), Query Frame = 1 Query: 235 EPIIPP----VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVPGDGNTIFNFT 672 +P +P ++I +TK IN ++ ++ +GK FPV +P T EVI +V EGD D+D+AV AR+AF G PW M ER ++ + ADL+E++ LA +E+ N GK + + + + ++ L Y+AGWADKIHG T+P DG+ +F +T Sbjct: 6 QPAVPAPLANLKIQHTKIFINNEWHNSLNGKKFPVINPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGCLLNKLADLMERDRVLLATMESMNAGKIFTHAYLLDTEVSIKALKYFAGWADKIHGQTIPSDGD-VFTYT 155
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: FTHFD_XENTR (10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis GN=aldh1l1 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.061e-26 Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642 INGQF+DA GKT+ +P I V+ DIDRAVA A++AF+ G W KM P +R RI+ R AD++E++ EELA +E+ ++G Y +L + V M ++ Y+AGW DKI G T+P Sbjct: 426 INGQFIDAEGGKTYDTVNPTDGTAICKVSLAQVSDIDRAVAAAKEAFENGEWGKMNPRDRGRILYRLADIMEEHQEELATIESIDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIP 546
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: AL1A3_HUMAN (Aldehyde dehydrogenase family 1 member A3 OS=Homo sapiens GN=ALDH1A3 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.811e-26 Identity = 56/137 (40.88%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 253 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVPGDGNTI 660 +++ +TK IN ++ ++ SGK F +P T E I V EGD D+D+AV A+ AF G PW ++ R R++ + ADL+E++ LAALET + GKP++ + ++ +R L Y+AGWADKI G T+P D N + Sbjct: 27 LEVKFTKIFINNEWHESKSGKKFATCNPSTREQICEVEEGDKPDVDKAVEAAQVAFQRGSPWRRLDALSRGRLLHQLADLVERDRATLAALETMDTGKPFLHAFFIDLEGCIRTLRYFAGWADKIQGKTIPTDDNVV 163
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: CROM_ENTDO (Omega-crystallin OS=Enteroctopus dofleini PE=1 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 5.268e-26 Identity = 61/140 (43.57%), Postives = 88/140 (62.86%), Query Frame = 1 Query: 256 QISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEG-PWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVPGDGNTIFNFT 672 +I +TK IN QFVD+ +GK + V +P T + I +V EG DID+AV + AF G PW +M R ++ R ADL E+++ L++LET N GKPY +S ++ +++L YYAGWADK G +P DG+ F+FT Sbjct: 12 EIKFTKIFINNQFVDSVNGKAYSVINPCTTKKICDVQEGSKADIDKAVQACKLAFKRGTPWRRMDASRRGHLLYRLADLFERDIAYLSSLETLNTGKPY-KSAYQDIVHCIQVLRYYAGWADKNMGQNIPVDGD-FFSFT 149
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: FTHFD_XENLA (10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis GN=aldh1l1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.880e-26 Identity = 54/121 (44.63%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642 INGQF+DA GK++ +P I V+ DIDRAVA A++AF+ G W KM P +R R++ R ADL+E++ EELA +E+ ++G Y +L + V M ++ Y+AGW DKI G T+P Sbjct: 426 INGQFMDAEGGKSYDTINPTDGTAICKVSLAQISDIDRAVAAAKEAFENGEWGKMNPRDRGRLLYRLADLMEEHQEELATIESIDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGRTIP 546
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: AL1L2_MOUSE (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Mus musculus GN=Aldh1l2 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.880e-26 Identity = 57/130 (43.85%), Postives = 80/130 (61.54%), Query Frame = 1 Query: 253 VQISYTKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642 V+I Y + INGQFVDA G+T+ +P I V+ D+DRAVA A+ AF+ G W +M +R R+M R ADL+E+N EELA +E ++G Y +L + + M V+ Y+AGW DKI G T+P Sbjct: 439 VKIPY-QCFINGQFVDAEDGETYATVNPTDGTTICRVSHASLADVDRAVAAAKDAFENGEWGRMNARDRGRLMYRLADLMEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIP 567
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: AL1L2_HUMAN (Probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 OS=Homo sapiens GN=ALDH1L2 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25 Identity = 54/121 (44.63%), Postives = 74/121 (61.16%), Query Frame = 1 Query: 280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642 INGQF DA GKT+ +P I V+ D+D+AVA A+ AF+ G W +M ER R+M R ADL+E+N EELA +E ++G Y +L + + M V+ Y+AGW DKI G T+P Sbjct: 447 INGQFTDADDGKTYDTINPTDGSTICKVSYASLADVDKAVAAAKDAFENGEWGRMNARERGRLMYRLADLLEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQGSTIP 567 The following BLAST results are available for this feature:
BLAST of FC920741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920741 ID=FC920741; Name=FC920741; organism=Citrus clementina; type=EST; length=688bpback to top |