FC920741

Overview
NameFC920741
Unique NameFC920741
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_BURCA (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=betB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I G +VDA SGKTF  +DP T E++A V +  A D+DRAVA+A++   E  W  MT  +RSRI+ RA +L+ +  +ELAA+ET + GKP  ++L  ++     ++ YYAG A  I GL VP
Sbjct:   11 IGGGYVDATSGKTFDTFDPATGELLAQVQQASAADVDRAVASAQEGQRE--WAAMTAMQRSRILRRAVELLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ALDH_ASPNG (Aldehyde dehydrogenase OS=Aspergillus niger GN=aldA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 60/147 (40.82%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  241 IIPPVQISYTKNL---INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVPGDGNTIFNFT 672
            I  P  + Y + L   I+G+FV  A GKTF   +P   + I  V E   +D+D AVA ARKAF EG W ++TP  R R++ + ADL E++ E LA++E  +NGK  +     ++      L YY GWADKIHG T+  +  T+ N+T
Sbjct:    8 ITTPNGVKYEQPLGLFIDGEFVKGAEGKTFETINPSNEKPIVAVHEATEKDVDTAVAAARKAF-EGSWRQVTPSTRGRMLTKLADLFERDAEILASIEALDNGKS-ITMAHGDIAGAAGCLRYYGGWADKIHGQTIDTNSETL-NYT 151          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 57/130 (43.85%), Postives = 77/130 (59.23%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVPGDGNTIFNF 669
            IN +FV    GKTF V +P    VI  V E   +D+D AVA ARKAF EG W + TP  R +++   A+L EKN++ LAA+E+ +NGK  +     ++ M V  L YY GWADKI G  +    +T FN+
Sbjct:   22 INNEFVKGQEGKTFDVINPSDESVITQVHEATEKDVDIAVAAARKAF-EGSWRQETPENRGKLLNNLANLFEKNIDLLAAVESLDNGKA-ISMAKGDISMCVGCLRYYGGWADKITGKVIDTTPDT-FNY 148          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_BURPP (Betaine aldehyde dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=betB PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21
Identity = 52/121 (42.98%), Postives = 75/121 (61.98%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I G +VDA SG+TF   DP T E +A+V +  A D+DRAV +A++   E  W  +T  +RSRI+ RA DL+ +  +ELAALET + GKP  ++L  ++     ++ YYAG A  I G  +P
Sbjct:   11 IGGGYVDATSGETFDTLDPATGETLASVQQASAADVDRAVRSAKQGQRE--WAALTAMQRSRILRRAVDLLRERNDELAALETRDTGKPIAETLAVDIVTGADVIEYYAGLATAIEGQQIP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: YF19_SCHPO (Putative aldehyde dehydrogenase-like protein C9E9.09c OS=Schizosaccharomyces pombe GN=SPAC9E9.09c PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 59/149 (39.60%), Postives = 80/149 (53.69%), Query Frame = 1
Query:  214 STAAVVEEPIIPPVQISYTKNL---INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFD-EGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVPGD 648
            ST  V    I  P   +Y + +   IN Q VD+  G    VY P T ++I  VA+ D ED+D AV  AR AF  + PW K +  +R R + R AD IE+N+E LA++ET +NGK  +     +V        YY GWADK +G T+  D
Sbjct:    2 STKLVDHVEITVPTGKTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTDAPWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKS-ITLARGDVQAAADCFRYYGGWADKDYGQTIETD 149          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: PUUC_ECOLI (Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=puuC PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 48/117 (41.03%), Postives = 71/117 (60.68%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHG 630
            ING++  AA  +TF   DP T   +A +A G + DIDRA++ AR  F+ G W   +P +R  ++ + ADL+E + EELA LET + GKP   SL  ++P   R + +YA   DK++G
Sbjct:   24 INGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAMSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYG 140          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_BURXL (Betaine aldehyde dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=betB PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.532e-20
Identity = 49/121 (40.50%), Postives = 75/121 (61.98%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I G +VDA SG+TF   DP T E +A+V +  A D++RAV +AR+   E  W  +T  +RSR++ RA +++ +  +ELAALET + GKP  ++L  ++     ++ YYAG A  I G  +P
Sbjct:   11 IGGAYVDATSGETFDTLDPATGETLASVQQASAADVERAVQSAREGQRE--WAALTAMQRSRVLRRAVEILRERNDELAALETRDTGKPIAETLAVDIATGADVIEYYAGLATAIEGQQIP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_BURPS (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei GN=betB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_BURP1 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=betB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_BURP0 (Betaine aldehyde dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=betB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I G   DA SGKTF  +DP T E++A V +  A+D+DRAVA+AR+   E  W  MT  +RSRI+ RA +L+ +  + LA LE  + GKP  ++   ++     ++ YYAG A  I GL VP
Sbjct:   11 IAGAHADATSGKTFDTFDPATGELLARVQQASADDVDRAVASAREGQRE--WAAMTAMQRSRILRRAVELLRERNDALAELEMRDTGKPIAETRAVDIVTGADVIEYYAGLATAIEGLQVP 129          
The following BLAST results are available for this feature:
BLAST of FC920741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
BETB_BURCA1.586e-2245.45Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
ALDH_ASPNG2.705e-2240.82Aldehyde dehydrogenase OS=Aspergillus niger GN=ald... [more]
ALDH_CLAHE3.907e-2143.85Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]
BETB_BURPP5.102e-2142.98Betaine aldehyde dehydrogenase OS=Burkholderia phy... [more]
YF19_SCHPO1.485e-2039.60Putative aldehyde dehydrogenase-like protein C9E9.... [more]
PUUC_ECOLI1.485e-2041.03Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen... [more]
BETB_BURXL2.532e-2040.50Betaine aldehyde dehydrogenase OS=Burkholderia xen... [more]
BETB_BURPS3.307e-2042.98Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP13.307e-2042.98Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]
BETB_BURP03.307e-2042.98Betaine aldehyde dehydrogenase OS=Burkholderia pse... [more]

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Properties
Property NameValue
Genbank descriptionC32012E02EF RVDevelop1 Citrus clementina cDNA clone C32012E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920741 ID=FC920741; Name=FC920741; organism=Citrus clementina; type=EST; length=688bp
TGCAGTTGCAAGCTTCACTTGCTAGGACAAAAGTTGCAGAGAGAGAGAGA
GAGAGAGAGAGAGAAGAGTTGAATAGGTCGCTTCTTCGCTTTGGCTATGG
CAGCTGCTCGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCT
TCTCCTTCTCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGG
CATCAGCAGGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCATTCCAC
CTGTTCAAATTAGTTACACTAAGAATTTAATAAATGGCCAATTTGTAGAC
GCAGCATCAGGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGT
GATTGCTAATGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTG
CTACTGCTCGCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCT
TATGAGAGGTCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAA
CATGGAGGAGCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATG
TACAATCTCTCNAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTAT
TATGCTGGATGGGCTGATAAAATCCATGGACTAACCGTCCCTGGTGATGG
AAATACCATATTCAACTTTACATGAACCATTGGCGTTG
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