FC920741

Overview
NameFC920741
Unique NameFC920741
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_KLEP3 (Betaine aldehyde dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betB PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18
Identity = 49/121 (40.50%), Postives = 70/121 (57.85%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            ING +  A SG+TF   +P T EV+A V     ED+DRAV +A++   +  W  MT  ERSRI+ RA DL+ +  +ELA LET + GKP  ++   ++     +L YYAG    + G  +P
Sbjct:   11 INGGYTSATSGRTFETINPATGEVLATVQAAGREDVDRAVESAQRG--QKIWAAMTAMERSRILRRAVDLLRQRNDELARLETLDTGKPLSETAAVDIVTGADVLEYYAGLIPALEGSQIP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_YERP3 (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=betB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18
Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVPGDGN 654
            K  ING + D+ASG TF   +P   E IA +   +A+D+D+AVA A++   +  W  MT  ERSRI+ RA D++    +ELAA+ET + GKP  ++   ++     +L YYAG    + G  +P  G+
Sbjct:    8 KLYINGAYTDSASGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGS 133          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_SERP5 (Betaine aldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=betB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18
Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            K  ING +VD+  GKTF   +P   EV+A +    AED++RAVA+A  A  +  W  MT   RSRI+ RA D++ +  +ELAALET + GK   ++   ++     +L YYAG    I G  +P
Sbjct:    8 KLYINGAYVDSTDGKTFNAVNPANGEVLAEIQSASAEDVNRAVASA--ASGQKVWAAMTAMARSRILRRAVDILRERNDELAALETLDTGKAMSETTAVDIVTGADVLEYYAGLIPSIEGQQIP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18
Identity = 57/148 (38.51%), Postives = 82/148 (55.41%), Query Frame = 1
Query:  196 RGISRFSTAAVVEEPIIPPVQISY---TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHG 630
            R + R  + A +  PI  P   +Y   T   ING+FV +   KTF V +P   E I  V +   +D+D AVA A+KAF E  W  + P  R++ +   ADL+EK+ E LAA+E+ +NGK  +     +V +V + L    GWADKI+G
Sbjct:   17 RSLLRLYSQAPLRVPITLPNGFTYEQPTGLFINGEFVASKQKKTFDVINPSNEEKITTVYKAMEDDVDEAVAAAKKAF-ETKWSIVEPEVRAKALFNLADLVEKHQETLAAIESMDNGKS-LFCARGDVALVSKYLRSCGGWADKIYG 162          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAS7 (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=ALD5 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18
Identity = 57/148 (38.51%), Postives = 82/148 (55.41%), Query Frame = 1
Query:  196 RGISRFSTAAVVEEPIIPPVQISY---TKNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHG 630
            R + R  + A +  PI  P   +Y   T   ING+FV +   KTF V +P   E I  V +   +D+D AVA A+KAF E  W  + P  R++ +   ADL+EK+ E LAA+E+ +NGK  +     +V +V + L    GWADKI+G
Sbjct:   17 RSLLRLYSQAPLRVPITLPNGFTYEQPTGLFINGEFVASKQKKTFDVINPSNEEKITTVYKAMEDDVDEAVAAAKKAF-ETKWSIVEPEVRAKALFNLADLVEKHQETLAAIESMDNGKS-LFCARGDVALVSKYLRSCGGWADKIYG 162          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_XANC5 (Betaine aldehyde dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=betB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 51/121 (42.15%), Postives = 70/121 (57.85%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I G++V A  G TF V +P T EV+ANV    A+D+D AV +A+    +  W  +T  ERSRI+LRA  L+ +  + LA LET N GKP  ++   +V     +L YYAG A  + G  VP
Sbjct:   11 IGGRYVPARGGHTFEVVNPATGEVLANVHNAGADDLDAAVDSAQAG--QRQWAALTTVERSRILLRAVALLRERNDALAELETLNTGKPLSETRSVDVVTGADVLEYYAGVAQALQGAQVP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 50/121 (41.32%), Postives = 73/121 (60.33%), Query Frame = 1
Query:  280 INGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            I+G +VDA+S +TF   +P   EV+A VAE  A D++RAV +A +   +  W  +T  ER+RIM RA DL+ +  +ELA LET + GKP  ++   ++     +L YYAG A  I G  +P
Sbjct:   11 IHGAYVDASSNQTFESINPANGEVLAEVAEAGAADLERAVESAEQG--QRIWAALTGIERARIMRRAVDLLRERNDELALLETLDTGKPLSETRSVDIITGADVLEYYAGLAPAIEGEQIP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_PSEA7 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=betB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 49/124 (39.52%), Postives = 72/124 (58.06%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVP 642
            K  I G++V+A+SG TF   +P   EV+A V     ED++RAV +A +   +  W  MT  +RSRI+ RA DL+ +  +ELAALET + GKP  ++   ++     +L YYAG    I G  +P
Sbjct:    8 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTAMQRSRILRRAVDLLRERNDELAALETLDTGKPLAETRAVDIVTGADVLEYYAGLVPAIEGEQIP 129          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: ABDH_SERP5 (Gamma-aminobutyraldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=Spro_3642 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 52/119 (43.70%), Postives = 70/119 (58.82%), Query Frame = 1
Query:  277 LINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGL 633
            LINGQ V    G   PVY+P T EV+  VAE  AE +D+AV  A  AF+   W + TP ER+  +L+ ADLI+ + E  A LE+ N GKPY   L  E+P V  +  ++AG +  + GL
Sbjct:    6 LINGQLV-TGQGALLPVYNPATGEVVVQVAEASAEQVDQAVLAADAAFEH--WGQTTPKERAEHLLKLADLIDSHAETFARLESINCGKPYHCVLNDELPGVADVFRFFAGASRCLSGL 121          
BLAST of FC920741 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.280e-18
Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  271 KNLINGQFVDAASGKTFPVYDPRTAEVIANVAEGDAEDIDRAVATARKAFDEGPWPKMTPYERSRIMLRAADLIEKNMEELAALETWNNGKPYVQSLXSEVPMVVRLLHYYAGWADKIHGLTVPGDGN 654
            K  ING + D+ SG TF   +P   E IA +   +A+D+D+AVA A++   +  W  MT  ERSRI+ RA D++    +ELAA+ET + GKP  ++   ++     +L YYAG    + G  +P  G+
Sbjct:    8 KLYINGAYTDSTSGDTFDAVNPANGECIAQLQAANAQDVDKAVAAAKQG--QPVWAAMTAMERSRILRRAVDILRDRNDELAAIETADTGKPLSETRSVDIVTGADVLEYYAGLIPALEGQQIPLRGS 133          
The following BLAST results are available for this feature:
BLAST of FC920741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 256
Match NameE-valueIdentityDescription
BETB_KLEP31.389e-1840.50Betaine aldehyde dehydrogenase OS=Klebsiella pneum... [more]
BETB_YERP31.815e-1838.28Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_SERP51.815e-1840.32Betaine aldehyde dehydrogenase OS=Serratia proteam... [more]
ALDH5_YEAST1.815e-1838.51Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH5_YEAS71.815e-1838.51Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
BETB_XANC54.043e-1842.15Betaine aldehyde dehydrogenase OS=Xanthomonas camp... [more]
BETB_PSEU54.043e-1841.32Betaine aldehyde dehydrogenase OS=Pseudomonas stut... [more]
BETB_PSEA74.043e-1839.52Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
ABDH_SERP54.043e-1843.70Gamma-aminobutyraldehyde dehydrogenase OS=Serratia... [more]
BETB_YERPY5.280e-1837.50Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]

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Properties
Property NameValue
Genbank descriptionC32012E02EF RVDevelop1 Citrus clementina cDNA clone C32012E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920741 ID=FC920741; Name=FC920741; organism=Citrus clementina; type=EST; length=688bp
TGCAGTTGCAAGCTTCACTTGCTAGGACAAAAGTTGCAGAGAGAGAGAGA
GAGAGAGAGAGAGAAGAGTTGAATAGGTCGCTTCTTCGCTTTGGCTATGG
CAGCTGCTCGCAGAATCTCCACCTTGCTGTCTCGTTCTTTCCCTTCTGCT
TCTCCTTCTCTGCTTCGCTCTCTTGGTAGGGAGTCTAGCAGGGCAAGAGG
CATCAGCAGGTTTAGCACAGCTGCTGTTGTTGAAGAGCCAATCATTCCAC
CTGTTCAAATTAGTTACACTAAGAATTTAATAAATGGCCAATTTGTAGAC
GCAGCATCAGGCAAAACATTTCCGGTCTACGACCCTCGTACTGCTGAAGT
GATTGCTAATGTTGCTGAAGGAGATGCGGAAGATATTGACCGTGCAGTTG
CTACTGCTCGCAAGGCATTTGATGAGGGACCTTGGCCAAAGATGACCCCT
TATGAGAGGTCAAGGATTATGTTGCGGGCTGCTGACTTGATTGAGAAAAA
CATGGAGGAGCTGGCAGCTTTGGAGACATGGAACAATGGAAAGCCCTATG
TACAATCTCTCNAATCTGAAGTACCAATGGTGGTTCGCCTGTTGCACTAT
TATGCTGGATGGGCTGATAAAATCCATGGACTAACCGTCCCTGGTGATGG
AAATACCATATTCAACTTTACATGAACCATTGGCGTTG
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