FC920748
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARL3_MOUSE (ADP-ribosylation factor-like protein 3 OS=Mus musculus GN=Arl3 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 9.682e-13 Identity = 29/56 (51.79%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 435 YTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAI 602 + LN+WD+GGQR IR YWR+YFE TD L++V+D +D +R ++ EL LL+EE + Sbjct: 61 FKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKL 116 HSP 2 Score: 21.557 bits (44), Expect = 9.682e-13 Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 592 KRLSGASLLILANKQDI 642 ++LS +LI ANKQD+ Sbjct: 114 EKLSCVPVLIFANKQDL 130
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARL3_RAT (ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus GN=Arl3 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.258e-12 Identity = 29/56 (51.79%), Postives = 42/56 (75.00%), Query Frame = 3 Query: 435 YTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAI 602 + LN+WD+GGQR IR YWR+YFE TD L++V+D +D +R ++ EL LL+EE + Sbjct: 61 FKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKL 116 HSP 2 Score: 21.1718 bits (43), Expect = 1.258e-12 Identity = 8/17 (47.06%), Postives = 13/17 (76.47%), Query Frame = 1 Query: 592 KRLSGASLLILANKQDI 642 ++LS +L+ ANKQD+ Sbjct: 114 EKLSCVPVLVFANKQDL 130
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: AR13B_HUMAN (ADP-ribosylation factor-like protein 13B OS=Homo sapiens GN=ARL13B PE=1 SV=1) HSP 1 Score: 50.0618 bits (118), Expect = 1.780e-12 Identity = 20/58 (34.48%), Postives = 37/58 (63.79%), Query Frame = 3 Query: 435 YTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIRG 608 + + I+D+GG IR W+NY+ ++ G+++VVD SD R+++ K + +L+ I G Sbjct: 65 FEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISG 122 HSP 2 Score: 32.7278 bits (73), Expect = 1.780e-12 Identity = 17/42 (40.48%), Postives = 24/42 (57.14%), Query Frame = 2 Query: 197 GLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQK*ELFI 322 GLDN+GKT I GE ++PT+GF+ + K E+ I Sbjct: 28 GLDNAGKTATAKGIQGEYPEDVAPTVGFSKINLRQGKFEVTI 69 HSP 3 Score: 29.6462 bits (65), Expect = 1.780e-12 Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 1 Query: 595 RLSGASLLILANKQDINGAL 654 R+SG +L+LANKQD GAL Sbjct: 119 RISGKPILVLANKQDKEGAL 138
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARL14_HUMAN (ADP-ribosylation factor-like protein 14 OS=Homo sapiens GN=ARL14 PE=1 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 4.635e-12 Identity = 26/59 (44.07%), Postives = 43/59 (72.88%), Query Frame = 3 Query: 435 YTLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIRGI 611 ++L +WDVGGQ +R+ W Y E TDGLV+VVD +D +RL++ + + +++LK E I+ + Sbjct: 58 FSLTVWDVGGQEKMRTVWGCYCENTDGLVYVVDSTDKQRLEESQRQFEHILKNEHIKNV 116 HSP 2 Score: 26.5646 bits (57), Expect = 4.635e-12 Identity = 10/29 (34.48%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 592 KRLSGASLLILANKQDINGALTPQRLLKV 678 + + +++LANKQD+ GALT + + ++ Sbjct: 111 EHIKNVPVVLLANKQDMPGALTAEDITRM 139
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 4.647e-12 Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 3 Query: 444 NIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIRGIL 614 N+WDVGGQ IR WR+YF T GL++VVD +D R+ + + EL ++ + +R L Sbjct: 68 NVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCL 124 HSP 2 Score: 30.4166 bits (67), Expect = 4.647e-12 Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 1 Query: 613 LLILANKQDINGALTPQRLLKV 678 LL+LANKQD+ GAL+P ++ V Sbjct: 125 LLVLANKQDLPGALSPAQITDV 146
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARL4D_MOUSE (ADP-ribosylation factor-like protein 4D OS=Mus musculus GN=Arl4d PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 2.217e-11 Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 3 Query: 438 TLNIWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIRGI 611 T +WDVGGQ +R WR+Y +TDGLV+VVD +++ RL++ K+EL + K +G+ Sbjct: 71 TFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDSAEIERLEEAKVELHRISKASDNQGV 128 HSP 2 Score: 25.409 bits (54), Expect = 2.217e-11 Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 604 GASLLILANKQDINGALTPQRLLK 675 G +L+LANKQD GAL+ + K Sbjct: 127 GVPVLVLANKQDQPGALSAAEVEK 150
BLAST of FC920748 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3) HSP 1 Score: 60.077 bits (144), Expect = 3.756e-11 Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 3 Query: 447 IWDVGGQRTIRSYWRNYFEQTDGLVWVVDGSDLRRLDDCKMELDNLLKEEAIRG 608 +WD+GGQ +IR YWR YF T +++VVD SD R+ K E +L+EE ++G Sbjct: 65 VWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKG 118 HSP 2 Score: 28.4906 bits (62), Expect = 3.756e-11 Identity = 13/21 (61.90%), Postives = 16/21 (76.19%), Query Frame = 1 Query: 592 KRLSGASLLILANKQDINGAL 654 + L GA +LI ANKQD+ GAL Sbjct: 114 EELKGAVVLIFANKQDLPGAL 134 The following BLAST results are available for this feature:
BLAST of FC920748 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920748 ID=FC920748; Name=FC920748; organism=Citrus clementina; type=EST; length=692bpback to top |