FC920749

Overview
NameFC920749
Unique NameFC920749
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14122 contig Ccv1_Contig14122:50..784. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920749 vs. ExPASy Swiss-Prot
Match: LGUL_SOLLC (Lactoylglutathione lyase OS=Solanum lycopersicum GN=GLX1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.346e-13
Identity = 48/144 (33.33%), Postives = 72/144 (50.00%), Query Frame = 2
Query:  122 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS---------------HFVVELTYNYGV------TSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP--GPVKGGTTHIAFVKDPDGYIFEL 472
            ++R+ D   +++FY++  GM LL++ D PE K+S  F+G+    S                  +ELT+N+G       T Y  G     GFGH  +  +DVYK  E   + G    ++P  G +KG    IAF+KDPDGY  E+
Sbjct:   32 MFRIKDPKVSLEFYSKVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSDPVERTAWTFSQKSTLELTHNWGTESDPNFTGYHNGNSEPRGFGHIGVTVDDVYKACERFESLGVEFVKKPLDGKMKG----IAFIKDPDGYWIEI 171          
BLAST of FC920749 vs. ExPASy Swiss-Prot
Match: LGUL_CICAR (Lactoylglutathione lyase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.735e-13
Identity = 50/147 (34.01%), Postives = 70/147 (47.62%), Query Frame = 2
Query:  122 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF-----GPEQ----------SHFVVELTYNYGVTS------YDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP--GPVKGGTTHIAFVKDPDGYIFELIQR 481
            ++R+ D   ++ FY+   GM LL++ D PE K+S  F+G+      P                +ELT+N+G  S      Y  G     GFGH  I  +D YK  E  +  G    ++P  G +KG    IAF+KDPDGY  EL  R
Sbjct:   33 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTTEAPSNPVDRTVWTFAQKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKG----IAFIKDPDGYWIELFDR 175          
BLAST of FC920749 vs. ExPASy Swiss-Prot
Match: LGUL_PSEPU (Lactoylglutathione lyase OS=Pseudomonas putida GN=gloA PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12
Identity = 53/152 (34.87%), Postives = 72/152 (47.37%), Query Frame = 2
Query:  110 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--------GPEQSH-------FVVELTYNYGVT-----SYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQRGPTP 493
            F H + RV D+++++ FYT   G KL+ KRD  E K+S  FL            +  H        V+ELT+N+G       +Y  G     GFGH  ++  DV    E   A    V  +     G   H+AF+KDPDGY  E+IQ  PTP
Sbjct:   25 FNHTMLRVKDIEKSLDFYTRVLGFKLVDKRDFVEAKFSLYFLALVDPATIPADDDARHQWMKSIPGVLELTHNHGTERDADFAYHHGNTDPRGFGHICVSVPDVVAACERFEAL--QVPFQKRLSDGRMNHLAFIKDPDGYWVEVIQ--PTP 172          
BLAST of FC920749 vs. ExPASy Swiss-Prot
Match: LGUL_SOYBN (Lactoylglutathione lyase OS=Glycine max GN=GLXI PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 48/147 (32.65%), Postives = 70/147 (47.62%), Query Frame = 2
Query:  122 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF-----GPE----------QSHFVVELTYNYGVTS------YDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP--GPVKGGTTHIAFVKDPDGYIFELIQR 481
            ++R+ D   ++ FY+   GM LL++ D PE K+S  F+G+      P                +ELT+N+G  S      Y  G     GFGH  +  +D YK  E  +  G    ++P  G +KG    IAF+KDPDGY  E+  R
Sbjct:   32 MFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPIDKVVWTFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDTYKACERFQNLGVEFVKKPEDGKMKG----IAFIKDPDGYWIEIFDR 174          
BLAST of FC920749 vs. ExPASy Swiss-Prot
Match: LGUL_PSEAE (Lactoylglutathione lyase OS=Pseudomonas aeruginosa GN=gloA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 47/149 (31.54%), Postives = 68/149 (45.64%), Query Frame = 2
Query:  110 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLG------------------FGPEQSHFVVELTYNYGVTSYDI--------GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGYIFELIQ 478
            F H + RV D  R++ FY+   GM+LLR+ D  E ++S  FL                   FG +    V+ELT+N+G  S D           GFGH   +  D+    E     G N  +   P+  G  ++AF+ DPDGY  E++Q
Sbjct:   24 FNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQS---VLELTHNWGSESDDSQYHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVK---PLDRGMKNVAFISDPDGYWVEIVQ 166          
BLAST of FC920749 vs. ExPASy Swiss-Prot
Match: LGUL_BRAJU (Lactoylglutathione lyase OS=Brassica juncea GN=GLY I PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 49/151 (32.45%), Postives = 70/151 (46.36%), Query Frame = 2
Query:  122 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS---------------HFVVELTYNYGVTS------YDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGY---IFELIQRGPT 490
            ++RV D   ++ FY+   GM LL++ D  E K+S  FLG+    +                  +ELT+N+G  S      Y  G     GFGH  +  +DV+K  E     G    ++P    G   +IAF+KDPDGY   IF+L   G T
Sbjct:   32 MFRVKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTSTAPTDPTERTVWTFGRPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEQLGVEFVKKPH--DGKMKNIAFIKDPDGYWIEIFDLKTIGTT 180          
BLAST of FC920749 vs. ExPASy Swiss-Prot
Match: LGUL_ARATH (Lactoylglutathione lyase OS=Arabidopsis thaliana GN=At1g08110 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 49/151 (32.45%), Postives = 71/151 (47.02%), Query Frame = 2
Query:  122 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--------GPEQ-------SHFVVELTYNYGVTS------YDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREPGPVKGGTTHIAFVKDPDGY---IFELIQRGPT 490
            ++R+ D   ++ FY+   GM LL++ D  E K+S  FLG+         P +           +ELT+N+G  S      Y  G     GFGH  +  +DV+K  E     G    ++P    G   +IAF+KDPDGY   IF+L   G T
Sbjct:   32 MFRIKDPKASLDFYSRVLGMSLLKRLDFSEMKFSLYFLGYEDTTTAPTDPTERTVWTFGQPATIELTHNWGTESDPEFKGYHNGNSEPRGFGHIGVTVDDVHKACERFEELGVEFAKKPN--DGKMKNIAFIKDPDGYWIEIFDLKTIGTT 180          
BLAST of FC920749 vs. ExPASy Swiss-Prot
Match: LGUL_RAT (Lactoylglutathione lyase OS=Rattus norvegicus GN=Glo1 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 49/157 (31.21%), Postives = 72/157 (45.86%), Query Frame = 2
Query:   89 PKKDKRRFL--HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS---------------HFVVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP--GPVKGGTTHIAFVKDPDGYIFELI 475
            P    + FL    + R+ D  +++ FYT   G+ LL+K D P  K+S  FL +  +                    +ELT+N+G       SY  G     GFGH  IA  DVY+  +     G    ++P  G +KG    +AFV+DPDGY  E++
Sbjct:   23 PDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPSMKFSLYFLAYEDKNDIPKDKTERTAWAFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYEACKRFEELGVKFVKKPDDGKMKG----LAFVQDPDGYWIEIL 175          
The following BLAST results are available for this feature:
BLAST of FC920749 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
LGUL_SOLLC3.346e-1333.33Lactoylglutathione lyase OS=Solanum lycopersicum G... [more]
LGUL_CICAR9.735e-1334.01Lactoylglutathione lyase OS=Cicer arietinum PE=2 S... [more]
LGUL_PSEPU1.661e-1234.87Lactoylglutathione lyase OS=Pseudomonas putida GN=... [more]
LGUL_SOYBN2.169e-1232.65Lactoylglutathione lyase OS=Glycine max GN=GLXI PE... [more]
LGUL_PSEAE2.398e-1131.54Lactoylglutathione lyase OS=Pseudomonas aeruginosa... [more]
LGUL_BRAJU3.132e-1132.45Lactoylglutathione lyase OS=Brassica juncea GN=GLY... [more]
LGUL_ARATH3.132e-1132.45Lactoylglutathione lyase OS=Arabidopsis thaliana G... [more]
LGUL_RAT9.112e-1131.21Lactoylglutathione lyase OS=Rattus norvegicus GN=G... [more]

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Properties
Property NameValue
Genbank descriptionC32012E12EF RVDevelop1 Citrus clementina cDNA clone C32012E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920749 ID=FC920749; Name=FC920749; organism=Citrus clementina; type=EST; length=734bp
TGCGACTTCACTCCTCCTTTCTGAGTGATTCCATATCAAAATGGCTGAGG
CTTCTCCTGCTGCTGCTAATGCCGAGCTGCTGGAATGGCCAAAGAAAGAT
AAGCGACGCTTCCTTCATGCTGTGTATCGTGTTGGTGATCTTGATCGCAC
CATCAAATTTTACACTGAATGCTTTGGGATGAAGCTGTTGAGAAAGAGAG
ACGTCCCAGAAGAGAAATACTCAAATGCCTTTCTTGGATTTGGCCCCGAA
CAGTCTCACTTTGTTGTGGAGTTAACATACAACTATGGTGTAACTTCATA
TGATATTGGAACTGGTTTTGGCCATTTTGCAATTGCAACTGAAGATGTTT
ACAAACTGGTTGAAAACATTCGTGCCAAGGGTGGCAATGTCACTAGAGAG
CCTGGTCCAGTTAAAGGTGGAACAACTCACATTGCCTTTGTGAAGGATCC
CGATGGTTATATTTTTGAACTCATCCAGAGAGGTCCAACTCCTGAACCAC
TCTGTCAAGTAATGCTTCGCGCTGGCGATCTTGGTCGCTCCATCAAGTTC
TATGAAAAGGCTTTGGGGATGAAACTGTTAAGGACAGTTGATAAACCTGA
ATACAAGTACACCCTGGCCATGCTTGGATATGCTGAGGAAGATCAGACTA
CTGTTCTGGAGNTAACTTATAATTATGGTGTGACTGAATATACCAGGGAA
ATGCATATGCGCAGGGTGCTATTAGTACTGATGA
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