FC920751
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: CAID_SALHS (Carnitinyl-CoA dehydratase OS=Salmonella heidelberg (strain SL476) GN=caiD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 45/136 (33.09%), Postives = 69/136 (50.74%), Query Frame = 3 Query: 279 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLP 683 +TL+RP+ NA+ A+ + E F + D +++ I+ G G + F AG D+ A G A F F + KP ++ +NG GGG +++ F V EN+ FA+PE LG+ PD G +RLP Sbjct: 16 ITLDRPKA-NAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGG---VLRLP 147
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: CAID_SALDC (Carnitinyl-CoA dehydratase OS=Salmonella dublin (strain CT_02021853) GN=caiD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 45/136 (33.09%), Postives = 69/136 (50.74%), Query Frame = 3 Query: 279 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLP 683 +TL+RP+ NA+ A+ + E F + D +++ I+ G G + F AG D+ A G A F F + KP ++ +NG GGG +++ F V EN+ FA+PE LG+ PD G +RLP Sbjct: 16 ITLDRPKA-NAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGG---VLRLP 147
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: CAID_SALCH (Carnitinyl-CoA dehydratase OS=Salmonella choleraesuis GN=caiD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 45/136 (33.09%), Postives = 69/136 (50.74%), Query Frame = 3 Query: 279 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLP 683 +TL+RP+ NA+ A+ + E F + D +++ I+ G G + F AG D+ A G A F F + KP ++ +NG GGG +++ F V EN+ FA+PE LG+ PD G +RLP Sbjct: 16 ITLDRPKA-NAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGG---VLRLP 147
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: CAID_SALA4 (Carnitinyl-CoA dehydratase OS=Salmonella agona (strain SL483) GN=caiD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 45/136 (33.09%), Postives = 69/136 (50.74%), Query Frame = 3 Query: 279 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLP 683 +TL+RP+ NA+ A+ + E F + D +++ I+ G G + F AG D+ A G A F F + KP ++ +NG GGG +++ F V EN+ FA+PE LG+ PD G +RLP Sbjct: 16 ITLDRPKA-NAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGG---VLRLP 147
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: CAID_CITK8 (Carnitinyl-CoA dehydratase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.575e-11 Identity = 44/136 (32.35%), Postives = 70/136 (51.47%), Query Frame = 3 Query: 279 LTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKFFSKEFILNYLMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLP 683 +TL+RP+ NA+ A+ + E+F + D +++ I+ G G + F AG D+ A G A F F + KP ++ +NG GGG +++ F V +N+ FA+PE LG+ PD G +RLP Sbjct: 16 ITLDRPKA-NAIDAKTSFEMGEVFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGG---VLRLP 147
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: MENB_STAAW (Naphthoate synthase OS=Staphylococcus aureus (strain MW2) GN=menB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 41/152 (26.97%), Postives = 76/152 (50.00%), Query Frame = 3 Query: 240 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKFFSKEFILNY--LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPG 686 D++ E + +T+NRP NA + + +S +++ F R D NV +++L G+G AFC+GGD G G + +L+ L+ KP ++++ G +GGG +++ +A +N++F +G F S + R+ G Sbjct: 13 DEIKYEFYEGIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVG 164
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: MENB_STAAS (Naphthoate synthase OS=Staphylococcus aureus (strain MSSA476) GN=menB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 41/152 (26.97%), Postives = 76/152 (50.00%), Query Frame = 3 Query: 240 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKFFSKEFILNY--LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPG 686 D++ E + +T+NRP NA + + +S +++ F R D NV +++L G+G AFC+GGD G G + +L+ L+ KP ++++ G +GGG +++ +A +N++F +G F S + R+ G Sbjct: 13 DEIKYEFYEGIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVG 164
BLAST of FC920751 vs. ExPASy Swiss-Prot
Match: MENB_BACSU (Naphthoate synthase OS=Bacillus subtilis GN=menB PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 42/152 (27.63%), Postives = 77/152 (50.66%), Query Frame = 3 Query: 240 DQVLEEETSFVRILTLNRPRQLNALSAQMISRLLELFQRYETDSNVKLLILKGKG-RAFCAGGDVAAVVRGINEGAKFFSKEFILNY--LMATYTKPQVSILNGIVMGGGAGVSIHGRFRVATENSVFAMPETALGLFPDIGASYFFVRLPG 686 D++L E + + +T+NRP NA + + ++ +++ F D NV +++L G G +AFC+GGD G G + +L+ L+ KP V++++G +GGG + I +A +N++F +G F S + R+ G Sbjct: 11 DEILYETYNGIAKITINRPEVHNAFTPKTVAEMIDAFADARDDQNVGVIVLAGAGDKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRVIPKPVVAMVSGYAIGGGHVLHIVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVG 162 The following BLAST results are available for this feature:
BLAST of FC920751 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920751 ID=FC920751; Name=FC920751; organism=Citrus clementina; type=EST; length=709bpback to top |