FC920752
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_CAMFF (60 kDa chaperonin OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=groL PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.013e-41 Identity = 84/157 (53.50%), Postives = 117/157 (74.52%), Query Frame = 1 Query: 205 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 AK+I F +R + +G+ KL+DAV +T+GPRGRNV++ + FG+P + DGV++A+ IEL D +EN GA L+REVASKTND AGDGTTTA+VLA I K GL ++T+GANP+ +KRG+DK V + EL+ A+ ++G+ +I VATISA +D IG Sbjct: 2 AKEIIFADDARNRLYSGVKKLNDAVKVTMGPRGRNVLIQKSFGAPSITKDGVSVAKEIELKDTIENMGAGLVREVASKTNDEAGDGTTTATVLAHAIFKEGLRNITAGANPIEVKRGMDKFVEAVTSELKSAAKKVDGKKEIAQVATISANSDSSIG 158
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_BACSU (60 kDa chaperonin OS=Bacillus subtilis GN=groL PE=1 SV=3) HSP 1 Score: 170.244 bits (430), Expect = 1.013e-41 Identity = 86/155 (55.48%), Postives = 121/155 (78.06%), Query Frame = 1 Query: 205 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDL 666 AK+I F + +R AM G+D L+DAV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANPV +++G+++ V +E L++ ++PIEG++ I VA ISA ++++ Sbjct: 2 AKEIKFSEEARRAMLRGVDALADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPVGVRKGMEQAVAVAIENLKEISKPIEGKESIAQVAAISAADEEV 156
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_HAHCH (60 kDa chaperonin OS=Hahella chejuensis (strain KCTC 2396) GN=groL PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.324e-41 Identity = 89/165 (53.94%), Postives = 118/165 (71.52%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGT*SPDAL 693 +AKD+ F +R M AG++ L+DAV +TLGP+GRNVVLD+ FG+P V DGV++A+ IEL D EN GA +++EVASKTND AGDGTTTA+VLA+ I+ GL SV +G NP+ LKRGIDK V V+E++ +RP E I V TISA +D+ IG +A+ Sbjct: 2 AAKDVKFGDSARKRMVAGVNTLADAVKVTLGPKGRNVVLDKSFGAPTVTKDGVSVAKEIELKDKFENMGAQMVKEVASKTNDEAGDGTTTATVLAQAILNEGLKSVAAGMNPMDLKRGIDKAVIAAVKEIKNISRPCEDSKSIAQVGTISANSDERIGNIIAEAM 166
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_EXISA (60 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groL PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.324e-41 Identity = 88/155 (56.77%), Postives = 120/155 (77.42%), Query Frame = 1 Query: 205 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDL 666 AKDI F + +R AM G+D L+DAV +T+GP+GRNVVL++ FGSP + NDGVTIA+ IEL D EN GA L+ EVASKTN+ AGDGTTTA+VLA+ +I+ GL +VT+GANP+ L++GIDK V +EEL+ ++PIE ++ I VA ISA ++++ Sbjct: 2 AKDIKFSEDARHAMLRGVDALADAVKVTIGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDRFENMGAKLVAEVASKTNEVAGDGTTTATVLAQAMIREGLKNVTAGANPMILRKGIDKAVTRALEELKAISKPIESKEAIAQVAAISAADEEV 156
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_THESQ (60 kDa chaperonin OS=Thermotoga sp. (strain RQ2) GN=groL PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.729e-41 Identity = 85/154 (55.19%), Postives = 121/154 (78.57%), Query Frame = 1 Query: 208 KDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDL 666 K + F++ +R A++ G+DK+++AV +TLGP+GRNVV+++ +GSP + NDGV+IA+ IEL D EN GA L++EVASKTND AGDGTTTA+VLA+ +IK GL +V +GANP+ LKRGIDK V VEE++K ++ + GR+DI VA ISA + ++ Sbjct: 3 KILKFNEEARRALERGVDKVANAVKVTLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGLKNVAAGANPILLKRGIDKAVEKAVEEIKKVSKKLSGREDIAHVAAISANSAEI 156
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_THEP1 (60 kDa chaperonin OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=groL PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.729e-41 Identity = 85/154 (55.19%), Postives = 121/154 (78.57%), Query Frame = 1 Query: 208 KDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDL 666 K + F++ +R A++ G+DK+++AV +TLGP+GRNVV+++ +GSP + NDGV+IA+ IEL D EN GA L++EVASKTND AGDGTTTA+VLA+ +IK GL +V +GANP+ LKRGIDK V VEE++K ++ + GR+DI VA ISA + ++ Sbjct: 3 KILKFNEEARRALERGVDKVANAVKVTLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGLKNVAAGANPILLKRGIDKAVEKAVEEIKKVSKKLSGREDIAHVAAISANSAEI 156
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_THEMA (60 kDa chaperonin OS=Thermotoga maritima GN=groL PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.729e-41 Identity = 85/154 (55.19%), Postives = 121/154 (78.57%), Query Frame = 1 Query: 208 KDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDL 666 K + F++ +R A++ G+DK+++AV +TLGP+GRNVV+++ +GSP + NDGV+IA+ IEL D EN GA L++EVASKTND AGDGTTTA+VLA+ +IK GL +V +GANP+ LKRGIDK V VEE++K ++ + GR+DI VA ISA + ++ Sbjct: 3 KILKFNEEARRALERGVDKVANAVKVTLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGLKNVAAGANPILLKRGIDKAVEKAVEEIKKVSKKLSGREDIAHVAAISANSAEI 156
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_SPHWW (60 kDa chaperonin OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=groL PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.729e-41 Identity = 85/158 (53.80%), Postives = 117/158 (74.05%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F + +R + G+D L+DAV +TLGP+GRNVV+D+ FG+P++ DGVT+A+ IEL D EN GA L+REVASKTND AGDGTTTA+VLA+ I++ GL SV +G NP+ LKRGID V +VE L+ R++P+ G +++ V ISA D +G Sbjct: 2 AAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEIELKDKFENIGAQLVREVASKTNDLAGDGTTTATVLAQAIVREGLKSVAAGMNPMDLKRGIDLAVTKVVENLKARSKPVAGSNEVAQVGIISANGDKEVG 159
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_PHATR (60 kDa chaperonin, chloroplastic OS=Phaeodactylum tricornutum GN=groL PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.729e-41 Identity = 86/165 (52.12%), Postives = 126/165 (76.36%), Query Frame = 1 Query: 205 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGT*SPDALT 696 AK I + +R A++ G++ + +AV +TLGP+GRNVVL++ +GSP++VNDGVTIA+ I+L D +EN G +LIR+ ASKTND AGDGTTTA+VLA ++K GL +V +GANP+S+K G++K LV ++ + A+P+E I+ VA+ISAGND++IG+ DAL+ Sbjct: 2 AKKILYQDNARRALERGMEIMVEAVSVTLGPKGRNVVLEKSYGSPQIVNDGVTIAKEIKLLDHIENTGVSLIRQAASKTNDVAGDGTTTATVLAYAMVKEGLKNVAAGANPISIKLGMEKASQYLVTQINEFAQPVEDIQSIQQVASISAGNDEIIGSLIADALS 166
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_HAES2 (60 kDa chaperonin OS=Haemophilus somnus (strain 2336) GN=groL PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.729e-41 Identity = 85/158 (53.80%), Postives = 117/158 (74.05%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F +R M AG++ L+DAV +TLGP+GRNV+LD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND AGDGTTTA+VLA+ I+ GL +V +G NP+ LKRGIDK V+ +VEEL+ ++P E +I+ V TISA D+ +G Sbjct: 2 TAKDVKFGNDARVKMLAGVNVLADAVKVTLGPKGRNVILDKAFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVSEGLKAVAAGMNPMDLKRGIDKAVNAVVEELKILSKPCETSKEIEQVGTISANADETVG 159 The following BLAST results are available for this feature:
BLAST of FC920752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920752 ID=FC920752; Name=FC920752; organism=Citrus clementina; type=EST; length=738bpback to top |