FC920752
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_GEOSF (60 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groL PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.618e-39 Identity = 86/157 (54.78%), Postives = 112/157 (71.34%), Query Frame = 1 Query: 205 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 AK I FDQ R A G++ L+DAV +TLGP+GRNVV+++ FG+P + DGVT+A+ IEL D EN GA L++EVASKT+D AGDGTTTA+VLA+ I + G V +G NP+ +KRGIDK V LV EL+ ++PI+ +I V TISA ND IG Sbjct: 2 AKVIKFDQEGRNAFLKGVNTLADAVKVTLGPKGRNVVIEKSFGAPLITKDGVTVAKEIELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGAKLVAAGHNPMEIKRGIDKAVETLVAELKSISKPIKDHKEIAQVGTISANNDKTIG 158
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_CRIGR (60 kDa heat shock protein, mitochondrial OS=Cricetulus griseus GN=HSPD1 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.618e-39 Identity = 82/167 (49.10%), Postives = 119/167 (71.26%), Query Frame = 1 Query: 196 RASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGT*SPDAL 693 RA AKD+ F +RA M G+D L+DAV +T+GP+GR V++++ +GSPKV DGVT+A+AI+L D +N GA L+++VA+ TN+ AGDGTTTA+VLAR I K G ++ GANPV ++RG+ V ++ EL+K+++P+ ++I VATISA D IG DA+ Sbjct: 24 RAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDKDIGNIISDAM 190
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH602_POLNA (60 kDa chaperonin 2 OS=Polaromonas naphthalenivorans (strain CJ2) GN=groL2 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.618e-39 Identity = 85/165 (51.52%), Postives = 119/165 (72.12%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGT*SPDAL 693 +AKD+ F +RA M G++ L++AV +TLGP+GRNVVL+ FG+P V DGV++A+ IEL D ++N GA +++EVASKT+D AGDGTTTA+VLA+ I+ G+ V +G NP+ LKRGIDK VH LVEEL+K ++ +I V +ISA +D+ IG DA+ Sbjct: 2 AAKDVIFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDIAGDGTTTATVLAQAIVHEGMKYVAAGMNPMDLKRGIDKAVHALVEELKKASKATTTSKEIAQVGSISANSDETIGKIIADAM 166
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH601_SYNS3 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9311) GN=groL1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.618e-39 Identity = 82/157 (52.23%), Postives = 121/157 (77.07%), Query Frame = 1 Query: 205 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 AK ++F SR +++ G++ L+DAV +T+GPRGRNVVL++ +GSP +VNDG TIA+ IELADP EN GA LI++VASKT D AGDGTTTA+VLA+ +++ GL + +GA+P+ L+RG++K V +V L +R++ + G D I+ VAT+S+G D+ +G Sbjct: 2 AKLLSFSNESRESLERGMNALADAVRVTIGPRGRNVVLEKSYGSPDIVNDGDTIAKEIELADPFENIGAKLIQQVASKTKDKAGDGTTTATVLAQAMVEEGLRNTAAGASPIELRRGMEKAVAAVVASLNQRSQSVSG-DAIRQVATVSSGGDEEVG 157
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH601_SYNPW (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH7803) GN=groL1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.618e-39 Identity = 84/157 (53.50%), Postives = 121/157 (77.07%), Query Frame = 1 Query: 205 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 AK + F SRAA++ G++ L+DAV +T+GPRGRNVVL++ FG+P +VNDG TIA+ I+L DP EN GA LI++VASKT D AGDGTTTA+VLA+ +++ GL + +GA+P+ L+RG++K V +V+ L +R++ + G D I+ VAT+SAG DD +G Sbjct: 2 AKLLKFSDESRAALERGMNALADAVRVTIGPRGRNVVLEKSFGAPDIVNDGDTIAKEIDLEDPFENIGAKLIQQVASKTKDKAGDGTTTATVLAQAMVEEGLRNTAAGASPIELRRGMEKAVALIVKGLGERSQSVSG-DAIRQVATVSAGGDDEVG 157
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH601_BRASO (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain ORS278) GN=groL1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.618e-39 Identity = 84/158 (53.16%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F +R M G+D L++AV +TLGP+GRNVV+++ FG+P++ DGVT+A+ IEL D EN GA ++REVASKT D AGDGTTTA+VLA+ I+K G SV +G NP+ LKRGID V +V++L+ A+ I D+I V TISA D IG Sbjct: 2 AAKDVKFSTDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTADLAGDGTTTATVLAQAIVKEGAKSVAAGMNPMDLKRGIDLAVEAIVKDLKAHAKKITSNDEIAQVGTISANGDSEIG 159
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_THELT (60 kDa chaperonin OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=groL PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.113e-39 Identity = 79/154 (51.30%), Postives = 118/154 (76.62%), Query Frame = 1 Query: 208 KDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDL 666 K + FD+ +R +++ G++K++DAV +TLGP+GRNVV+++ +GSP + NDGV+IA+ IEL D EN GA L++EVASKTND AGDGTTTA+VLA+ +I+ GL +V +G+NP+ LKRGIDK + ++ +A+ + GR+DI VA ISA + ++ Sbjct: 3 KLLRFDEEARRSLEKGVNKVADAVRITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIELEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQSMIREGLKNVAAGSNPILLKRGIDKATEKAAKYIKDKAKKLSGREDIAHVAAISANSSEI 156
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_SALTY (60 kDa chaperonin OS=Salmonella typhimurium GN=groL PE=3 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 2.113e-39 Identity = 85/158 (53.80%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F +R M G++ L+DAV +TLGP+GRNVVLD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND AGDGTTTA+VLA+ II GL +V +G NP+ LKRGIDK V VEEL+ + P I V TISA +D+ +G Sbjct: 2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVG 159
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_SALTI (60 kDa chaperonin OS=Salmonella typhi GN=groL PE=3 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 2.113e-39 Identity = 85/158 (53.80%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F +R M G++ L+DAV +TLGP+GRNVVLD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND AGDGTTTA+VLA+ II GL +V +G NP+ LKRGIDK V VEEL+ + P I V TISA +D+ +G Sbjct: 2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVG 159
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_SALSV (60 kDa chaperonin OS=Salmonella schwarzengrund (strain CVM19633) GN=groL PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.113e-39 Identity = 85/158 (53.80%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F +R M G++ L+DAV +TLGP+GRNVVLD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND AGDGTTTA+VLA+ II GL +V +G NP+ LKRGIDK V VEEL+ + P I V TISA +D+ +G Sbjct: 2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGIDKAVAAAVEELKALSVPCSDSKAIAQVGTISANSDETVG 159 The following BLAST results are available for this feature:
BLAST of FC920752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920752 ID=FC920752; Name=FC920752; organism=Citrus clementina; type=EST; length=738bpback to top |