FC920752
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_LEPCP (60 kDa chaperonin OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=groL PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39 Identity = 83/159 (52.20%), Postives = 117/159 (73.58%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGT 675 +AKD+ F +RA M G++ L++AV +TLGP+GRNVVL+ FG+P V DGV++A+ IEL D ++N GA +++EVASKT+D AGDGTTTA+VLA+ I++ G+ V +G NP+ LKRGIDK VH LV EL+K ++ +I V +ISA +D+ IGT Sbjct: 2 AAKDVIFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVHALVAELKKASKATTTSKEIAQVGSISANSDESIGT 160
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_HUMAN (60 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPD1 PE=1 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39 Identity = 81/167 (48.50%), Postives = 119/167 (71.26%), Query Frame = 1 Query: 196 RASAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGT*SPDAL 693 RA AKD+ F +RA M G+D L+DAV +T+GP+GR V++++ +GSPKV DGVT+A++I+L D +N GA L+++VA+ TN+ AGDGTTTA+VLAR I K G ++ GANPV ++RG+ V ++ EL+K+++P+ ++I VATISA D IG DA+ Sbjct: 24 RAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDKEIGNIISDAM 190
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_HERA2 (60 kDa chaperonin OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=groL PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39 Identity = 82/155 (52.90%), Postives = 113/155 (72.90%), Query Frame = 1 Query: 205 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDL 666 AK +AF++ +R A++ G+D ++DAV TLGPRGRNV +D+ FGSP V +DGVT+A+ IEL DP EN GA L+ E A+KTND AGDGTTTA+VLA+ I+ GL V +GAN + +KRG+DK L++ + A+P+ R DI +VATISA + + Sbjct: 2 AKQVAFNEEARRALKRGVDVVADAVKTTLGPRGRNVAIDKKFGSPTVTHDGVTVAKEIELKDPFENMGARLLVEAATKTNDVAGDGTTTATVLAQAIVHEGLRQVAAGANSMMIKRGLDKGTAVLLQAIRDLAKPVNDRTDISSVATISAADSSI 156
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_GLUOX (60 kDa chaperonin OS=Gluconobacter oxydans GN=groL PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39 Identity = 84/158 (53.16%), Postives = 115/158 (72.78%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F +R M G+D L++AV +TLGP+GRNVVLD+ FG+P++ DGV++A+ IELAD EN GA ++REVASKTND AGDGTTTA+VLA+ II+ G +V +G NP+ LKRGIDK V +V++L+ + I ++I V TISA + IG Sbjct: 2 AAKDVKFGADARERMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELADKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIIREGAKAVAAGMNPMDLKRGIDKAVGVVVDQLKSNTKKITSPEEIAQVGTISANGETEIG 159
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_FUSNP (60 kDa chaperonin OS=Fusobacterium nucleatum subsp. polymorphum GN=groL PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39 Identity = 80/155 (51.61%), Postives = 119/155 (76.77%), Query Frame = 1 Query: 205 AKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDL 666 AK I F+ +R ++ G++ L+DAV +TLGPRGRNVVL++ +G+P + NDGVTIA+ IEL DP EN GAAL++EVA K+ND AGDGTTTA++LA+ I+K GL +++GANP+ LK+GI+ ++ L+ +A+ IE ++I VA+ISAG++++ Sbjct: 2 AKIINFNDEARKKLEIGVNTLADAVKVTLGPRGRNVVLEKSYGAPLITNDGVTIAKEIELEDPFENMGAALVKEVAIKSNDVAGDGTTTATILAQAIVKEGLKMLSAGANPIFLKKGIELAAKEAIDVLKDKAKKIESNEEISQVASISAGDEEI 156
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_ESCF3 (60 kDa chaperonin OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=groL PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39 Identity = 85/158 (53.80%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F +R M G++ L+DAV +TLGP+GRNVVLD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND AGDGTTTA+VLA+ II GL +V +G NP+ LKRGIDK V VEEL+ + P I V TISA +D+ +G Sbjct: 2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDTAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVG 159
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_ENTIT (60 kDa chaperonin (Fragment) OS=Enterobacter intermedius GN=groL PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39 Identity = 85/158 (53.80%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F +R M G++ L+DAV +TLGP+GRNVVLD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND AGDGTTTA+VLA+ II GL +V +G NP+ LKRGIDK V VEEL+ + P I V TISA +D+ +G Sbjct: 2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIIAEGLKAVAAGMNPMDLKRGIDKAVVAAVEELKALSVPCSDSKAIAQVGTISANSDETVG 159
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_ENTAS (60 kDa chaperonin (Fragment) OS=Enterobacter asburiae GN=groL PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39 Identity = 85/158 (53.80%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F +R M G++ L+DAV +TLGP+GRNVVLD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND AGDGTTTA+VLA+ II GL +V +G NP+ LKRGIDK V VEEL+ + P I V TISA +D+ +G Sbjct: 2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVG 159
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_ENTAG (60 kDa chaperonin (Fragment) OS=Enterobacter agglomerans GN=groL PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39 Identity = 85/158 (53.80%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F +R M G++ L+DAV +TLGP+GRNVVLD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND AGDGTTTA+VLA+ II GL +V +G NP+ LKRGIDK V VEEL+ + P I V TISA +D+ +G Sbjct: 2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVASAVEELKALSVPCSDSKAIAQVGTISANSDETVG 159
BLAST of FC920752 vs. ExPASy Swiss-Prot
Match: CH60_ECOUT (60 kDa chaperonin OS=Escherichia coli (strain UTI89 / UPEC) GN=groL PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39 Identity = 85/158 (53.80%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 202 SAKDIAFDQISRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDPAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIG 672 +AKD+ F +R M G++ L+DAV +TLGP+GRNVVLD+ FG+P + DGV++AR IEL D EN GA +++EVASK ND AGDGTTTA+VLA+ II GL +V +G NP+ LKRGIDK V VEEL+ + P I V TISA +D+ +G Sbjct: 2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVG 159 The following BLAST results are available for this feature:
BLAST of FC920752 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920752 ID=FC920752; Name=FC920752; organism=Citrus clementina; type=EST; length=738bpback to top |