FC920757
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920757 vs. ExPASy Swiss-Prot
Match: ERF1_TETTH (Eukaryotic peptide chain release factor subunit 1 OS=Tetrahymena thermophila GN=ERF1 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.504e-49 Identity = 103/219 (47.03%), Postives = 139/219 (63.47%), Query Frame = 3 Query: 3 ARLRMEKSHNYVRKTAELATQFYLNPATSQPNVSGLVLAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNNHKRDPSFAEALA 659 ARLR+EK HNY+RK E+ATQ +++ + NV GLVLAGS DFK ELS + MFDPRL KI+K+VDVSYGGENG NQAIEL+ ESL+NVKF+QEK +I K+F+ I+ D+G V+G DT++ L G ++ ++ +E L R KN VT +I + + N +F+D ELE E +L EW A Y FG L F+T+ F + + Sbjct: 190 ARLRVEKRHNYLRKVCEVATQTFISQ--DKINVQGLVLAGSGDFKNELSTTQMFDPRLACKIIKIVDVSYGGENGLNQAIELAQESLTNVKFVQEKNVISKFFDCIAIDSGTVVYGVQDTMQLLLDGVIENILCFEELTTLRVTRKNKVTEQITHIFIPPNELNNPKHFKDG--EHELEKIEVENLTEWLAEHYSEFGAELYFITDKSAEGCQFVKGFS 404
BLAST of FC920757 vs. ExPASy Swiss-Prot
Match: RF1_PYRFU (Peptide chain release factor subunit 1 OS=Pyrococcus furiosus GN=prf1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.112e-22 Identity = 48/161 (29.81%), Postives = 91/161 (56.52%), Query Frame = 3 Query: 6 RLRMEKSHNYVRKTAELATQFYLNPATSQPNVSGLVLAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQ 488 R+R +++H ++++ E A + +L P + G+++ G K E + D L+ KI+ +VD+SY GE G + + +A+ L + + I+E+ L+ ++ + I +DTG +G + KAL++GAVDTL++ E D R +K G +K ++ E+ Sbjct: 189 RIREQETHEFMKRIGEHANRIFL-PLLESGELKGIIVGGPGPTKEEFVEGDYLHHELKKKIIGIVDISYHGEYGLRELVAKAADILRDHEVIRERNLVNEFLKHIVKDTGLATYGEREVRKALELGAVDTLLISEGYDKVRVHVKCNNCGWEELKTMSEEE 348 HSP 2 Score: 32.7278 bits (73), Expect = 1.112e-22 Identity = 13/35 (37.14%), Postives = 21/35 (60.00%), Query Frame = 2 Query: 584 QEVWLHTRVCYQQSQEGSQFCRGFGGIGGILRYSL 688 +E + + ++EG QF R FGG+G ILR+ + Sbjct: 383 EEAGSNVEIISLDTEEGQQFYRAFGGLGAILRFRI 417
BLAST of FC920757 vs. ExPASy Swiss-Prot
Match: RF1_THEON (Peptide chain release factor subunit 1 OS=Thermococcus onnurineus (strain NA1) GN=prf1 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.857e-20 Identity = 49/161 (30.43%), Postives = 92/161 (57.14%), Query Frame = 3 Query: 6 RLRMEKSHNYVRKTAELATQFYLNPATSQPNVSGLVLAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQ 488 R+R +++H ++++ AE A + +L P + + G+++ G K E D L+ K++ VVD+SY GE G + +E +++ LS + ++E++LI +F + +DTG +G + KAL++GAVDTL++ E D R K G +K ++ ++ Sbjct: 186 RIREQETHEFMKRIAEHAAKAFL-PLLEKGELKGIIIGGPGPTKEEFVDGDYLHHELRKKVIGVVDISYHGEYGLRELVEKASDILSEHEAVKERKLIQDFFRHLVKDTGLITYGEREVRKALELGAVDTLLISEGYDKVRVKAKCNACGWEELKTMSEQE 345
BLAST of FC920757 vs. ExPASy Swiss-Prot
Match: RF1_METVS (Peptide chain release factor subunit 1 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=prf1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.861e-19 Identity = 54/203 (26.60%), Postives = 104/203 (51.23%), Query Frame = 3 Query: 6 RLRMEKSHNYVRKTAELATQFYLNPATSQPNVSGLVLAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQN-----NFRDSA-------TSAELEVQEKSSLLEWFA 575 RL + +H ++ + E +T+ ++ P + + GL++ G + K E ++ D L+ KI+ D+ Y E G + +E +++ L ++ ++EK LI K+F+E I D G +G ++ L+MGA+DTLIV E++++TR +K + N +QE N F D S + ++E+ ++E+ + Sbjct: 188 RLIDDAAHQFMVRIGEYSTESFM-PILEEKKLRGLLIGGPGNTKNEFAEKDFLHHELKKKIIDTFDLCYTEEFGIRELLEKASDLLRDLDLMKEKNLIQKFFKELIKDDGGLSAYGESQVMRYLEMGAIDTLIVTEDIELTRVTIK--------CNNCNFKQEINVKTRDLYKFEDEVKTKICKQCSGSMYIEEEKDIIEYLS 381 HSP 2 Score: 26.5646 bits (57), Expect = 3.861e-19 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 623 SQEGSQFCRGFGGIGGILRYSL 688 ++EGSQ + F G+ ILRY + Sbjct: 398 TEEGSQISKAFKGMAAILRYKI 419
BLAST of FC920757 vs. ExPASy Swiss-Prot
Match: RF1_PYRAB (Peptide chain release factor subunit 1 OS=Pyrococcus abyssi GN=prf1 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.014e-19 Identity = 47/161 (29.19%), Postives = 93/161 (57.76%), Query Frame = 3 Query: 6 RLRMEKSHNYVRKTAELATQFYLNPATSQPNVSGLVLAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQ 488 R+R +++H ++++ E A + +L P + + G+++ G K + + D L+ KI+ VVD+SY GE G + +E +++ L + + I+EK+L+ ++ + + +DTG +G + +AL++GAVDTL++ E D R K G +K ++ E+ Sbjct: 189 RIREQETHEFMKRIGEHANRVFL-PLLEKGELKGIIVGGPGPTKEDFVEGDYLHHELKKKIIGVVDISYHGEYGLRELVEKASDILRDHEVIREKKLVNEFLKHVVKDTGLATYGEREVRRALEIGAVDTLLISEGYDKVRVRAKCNHCGWEELKTMSEEE 348
BLAST of FC920757 vs. ExPASy Swiss-Prot
Match: RF1_PYRKO (Peptide chain release factor subunit 1 OS=Pyrococcus kodakaraensis GN=prf1 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.665e-18 Identity = 43/141 (30.50%), Postives = 85/141 (60.28%), Query Frame = 3 Query: 6 RLRMEKSHNYVRKTAELATQFYLNPATSQPNVSGLVLAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITR 428 R+R +++H ++++ E A + +L P + + G+++ G K E + D L+ K++ VVD+SY GE G + +E +++ L + + ++E++LI ++F+ + +DTG +G + KAL++GAVD L++ E D R Sbjct: 186 RIREQETHEFMKRIGEHANKAFL-PLLEKGELRGIIIGGPGPTKEEFVEGDYLHHELRKKVIGVVDISYHGEYGLRELVEKASDILKDHEAVKERQLIQEFFKHLVKDTGMITYGEKEVRKALELGAVDKLLISEGYDKVR 325
BLAST of FC920757 vs. ExPASy Swiss-Prot
Match: RF1_PYRHO (Peptide chain release factor subunit 1 OS=Pyrococcus horikoshii GN=prf1 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18 Identity = 46/161 (28.57%), Postives = 93/161 (57.76%), Query Frame = 3 Query: 6 RLRMEKSHNYVRKTAELATQFYLNPATSQPNVSGLVLAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQ 488 R+R +++H ++++ E A + +L P + + G+++ G K E + + L+ KIL VVD+SY GE G + +E +++ L + + I+EK+L+ ++ + + +DTG +G + +AL++GAVD L++ E + R +K G +K ++ E+ Sbjct: 189 RIREQETHEFMKRIGEHANRAFL-PLLEKGELKGIIIGGPGPTKEEFVEGEYLHHELKKKILGVVDISYHGEYGLRELVEKASDILRDHEVIREKKLVNEFLKHVVKDTGLATYGEREVRRALEIGAVDVLLISEGYNKVRVRVKCNHCGWEELKTMSEEE 348
BLAST of FC920757 vs. ExPASy Swiss-Prot
Match: RF1_METBU (Peptide chain release factor subunit 1 OS=Methanococcoides burtonii (strain DSM 6242) GN=prf1 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.546e-18 Identity = 56/231 (24.24%), Postives = 120/231 (51.95%), Query Frame = 3 Query: 6 RLRMEKSHNYVRKTAELATQFYLNPATSQPNVSGLVLAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNTVTGEIVIKHLNREQETNQNNFRDSATSAE----------LEVQEKSSLLEWFANEYRRFGCTLEFVTNNHKRDPSFAEALAVLV 668 +LR+ H++ ++ + A++ +L A Q + G+++ G + K E + F ++ K+L + DV+Y E+G ++ + ++E L ++ + EK+L+ ++F E+ D+GK +G D+ + L +GAVD L++ E+L R +K T + EQ+T++ F+ +S+ LE+ EK +++ + + G +EF++ + + +A +V Sbjct: 186 QLRLIAIHDFYKRIGDAASEVFL--AVEQKDFEGVLIGGPSPTKEEFEAGNFFHHEIEKKVLDLFDVAYTDESGLSELVNAASERLEDLDLMVEKKLMQQFFRELVSDSGKATYGEDNVRENLIIGAVDILLISEDLRAVRETVKCT--------SCDYEQKTSR-EFKPGDSSSPTGNCPKCGSYLEITEKVDVVDQLSEICDQMGTRVEFISTDFEEGSQLLKAFGGVV 405
BLAST of FC920757 vs. ExPASy Swiss-Prot
Match: RF1_THESM (Peptide chain release factor subunit 1 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=prf1 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.013e-17 Identity = 59/229 (25.76%), Postives = 115/229 (50.22%), Query Frame = 3 Query: 6 RLRMEKSHNYVRKTAELATQFYLNPATSQPNVSGLVLAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEEISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRY-VLKNTVTGEIVIKHLNREQETNQNNFR--DSATSAELEVQEKSSLLEWFANEYRRFGCTLEFVTNNHKRDPSFAEA---LAVLVEY 674 R+R +++H ++++ E A+ +L P + + G+++ G K E + + L+ +IL VVD+SY GE G + +E +++ L + ++E++L+ ++F+ + +DTG +G + KAL++GAVD L++ E D R L N E + E E + N + S + V EK + E G +E ++ + + F +A +A ++ Y Sbjct: 186 RIREQEAHEFMKRIGEHASSVFL-PLLEKDELKGIIIGGPGPTKEEFVEGEYLHHELRKRILGVVDISYHGEYGLRELVEKASDILREHEAVKERKLVQQFFKHLVKDTGLITYGEKEVRKALELGAVDILLLSEGYDRVRVKALCNNCGWEELKTMTEAEFELYKKNLKACPKCNSQNISV-EKWDVAEELIKIAEEGGAEVEIISLDTEEGQQFYKAFGGIAAILRY 412
BLAST of FC920757 vs. ExPASy Swiss-Prot
Match: RF1_METMP (Peptide chain release factor subunit 1 OS=Methanococcus maripaludis GN=prf1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.728e-17 Identity = 59/231 (25.54%), Postives = 116/231 (50.22%), Query Frame = 3 Query: 6 RLRMEKSHNYVRKTAELATQFYLNPATSQPNVSGLVLAGSADFKTELSQSDMFDPRLQAKILKVVDVSYGGENGFNQAIELSAESLSNVKFIQEKRLIGKYFEE-ISQDTGKYVFGADDTLKALDMGAVDTLIVWENLDITRYVLKNT---VTGEIVIKHLNREQETNQNNFRDSAT-SAELEVQEKSSLLEWFANEYRRFGCTLEFVTNNHKRDPSFAEA---LAVLVEY 674 RL + +H ++ + E AT+ ++ P + + GL+L G + K E ++ D L+ KI+ D+ Y E G + ++ +++ L ++ ++EK LI ++F+E I D G +G +K L+MGA+DTLIV E++ ITR +K +T E+ +K + Q + T + + E+ ++E+ ++ L V+ + + + A +A ++ Y Sbjct: 188 RLIDDAAHQFMVRIGEYATESFM-PILEEKKLKGLLLGGPGNTKNEFAEKDYLHHELKKKIIDTFDLCYTEEFGIRELLDKASDLLRDIDLMKEKNLIQRFFKELIKDDGGLSAYGEAQVMKYLEMGAIDTLIVTEDIGITRVTVKCNNCDITQEVNVKTNEMFKFEEQLKTKACPTCGGAMYIDEEKDIIEYLSDLCNMHNTDLIVVSTDTEEGSQISRAFKGMAAILRY 417 The following BLAST results are available for this feature:
BLAST of FC920757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920757 ID=FC920757; Name=FC920757; organism=Citrus clementina; type=EST; length=738bpback to top |