FC920760 | Citrus Genome Database

Overview


Name	FC920760
Unique Name	FC920760
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	630

Libraries


Library Name	Type
RVDevelop1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig9336	contig	Ccv1_Contig9336:343..971.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.677e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 135.961 bits (341), Expect = 1.570e-31
Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 3

Query:  411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRL
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRL 73

HSP 3 Score: 105.916 bits (263), Expect = 1.739e-22
Identity = 52/60 (86.67%), Postives = 56/60 (93.33%), Query Frame = 3

Query:    3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182
            VE S TI++VKAKIQDKEGIPPD  RLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   17 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.395e-32
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 3

Query:  183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 130.954 bits (328), Expect = 5.049e-30
Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 3

Query:  411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRL
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRL 73

HSP 3 Score: 103.219 bits (256), Expect = 1.127e-21
Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = 3

Query:    3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182
            VE S TI++VKAKIQDKEGIPPD  RLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   17 VEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.771e-28
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 3

Query:  183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 118.627 bits (296), Expect = 2.593e-26
Identity = 58/73 (79.45%), Postives = 64/73 (87.67%), Query Frame = 3

Query:  411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRL
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRL 73

HSP 3 Score: 89.7373 bits (221), Expect = 1.290e-17
Identity = 43/59 (72.88%), Postives = 48/59 (81.36%), Query Frame = 3

Query:    6 ESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182
            E   T+  VK KI DKEG+P D  RLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:   18 EPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

[Close]

BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.796e-27
Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 3

Query:  183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 115.931 bits (289), Expect = 1.681e-25
Identity = 55/73 (75.34%), Postives = 65/73 (89.04%), Query Frame = 3

Query:  411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRL
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRL 73

HSP 3 Score: 91.6633 bits (226), Expect = 3.395e-18
Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 3

Query:    6 ESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182
            E + T+ D+K KI DKEG+P D  RLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:   18 EPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

[Close]

BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 6.824e-27
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 3

Query:  216 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 404
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 2 Score: 118.627 bits (296), Expect = 2.593e-26
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 3

Query:  444 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 62

HSP 3 Score: 102.834 bits (255), Expect = 1.473e-21
Identity = 51/58 (87.93%), Postives = 54/58 (93.10%), Query Frame = 3

Query:    3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 176
            VE S TI++VKAKIQDKEGIPPD  RLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    6 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

[Close]

BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.628e-20
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  189 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 92.8189 bits (229), Expect = 1.524e-18
Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = 3

Query:  417 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL L
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLAL 73

HSP 3 Score: 75.8702 bits (185), Expect = 1.928e-13
Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 3

Query:    3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182
            +E + TID VK ++++KEGIPP   RLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   17 IEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

[Close]

BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.126e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  189 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 92.4337 bits (228), Expect = 1.990e-18
Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 3

Query:  417 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL L
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLAL 73

HSP 3 Score: 75.485 bits (184), Expect = 2.518e-13
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 3

Query:    3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182
            +E + TID +K ++++KEGIPP   RLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   17 IEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

[Close]

BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.126e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  189 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 92.4337 bits (228), Expect = 1.990e-18
Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 3

Query:  417 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL L
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLAL 73

HSP 3 Score: 75.485 bits (184), Expect = 2.518e-13
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 3

Query:    3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182
            +E + TID +K ++++KEGIPP   RLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   17 IEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

[Close]

BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.126e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  189 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 92.4337 bits (228), Expect = 1.990e-18
Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 3

Query:  417 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL L
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLAL 73

HSP 3 Score: 75.485 bits (184), Expect = 2.518e-13
Identity = 35/60 (58.33%), Postives = 45/60 (75.00%), Query Frame = 3

Query:    3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182
            +E + TID +K ++++KEGIPP   RLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:   17 IEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

[Close]

BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.126e-20
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 3

Query:  183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 419
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

HSP 2 Score: 92.0485 bits (227), Expect = 2.599e-18
Identity = 42/73 (57.53%), Postives = 56/73 (76.71%), Query Frame = 3

Query:  411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL L
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLAL 73

HSP 3 Score: 74.3294 bits (181), Expect = 5.609e-13
Identity = 33/63 (52.38%), Postives = 45/63 (71.43%), Query Frame = 3

Query:    3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 191
            +E +  +D +K ++++KEGIPP   RLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:   17 IEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

The following BLAST results are available for this feature:

BLAST of FC920760 vs. ExPASy Swiss-Prot

BLAST of FC920760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97


Match Name	E-value	Identity	Description
UBIQ_LEIMA	1.677e-33	93.42	Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1	[more]
UBIQ_LEITA	5.395e-32	90.79	Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3...	[more]
UBIL_NPVOP	2.771e-28	80.26	Ubiquitin-like protein OS=Orgyia pseudotsugata mul...	[more]
UBIL_NPVAC	1.796e-27	76.32	Ubiquitin-like protein OS=Autographa californica n...	[more]
UBIQ_LUMTE	6.824e-27	95.24	Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 ...	[more]
RUB1_DESAN	1.628e-20	64.86	NEDD8-like protein RUB1 OS=Deschampsia antarctica ...	[more]
RUB2_ORYSJ	2.126e-20	63.51	NEDD8-like protein RUB2 OS=Oryza sativa subsp. jap...	[more]
RUB1_ORYSJ	2.126e-20	63.51	NEDD8-like protein RUB1 OS=Oryza sativa subsp. jap...	[more]
RUB1_ARATH	2.126e-20	63.51	NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN...	[more]
NEDD8_DROME	2.126e-20	58.23	NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=...	[more]

Pages

Properties


Property Name	Value
Genbank description	C32012F11EF RVDevelop1 Citrus clementina cDNA clone C32012F11, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC920760 ID=FC920760; Name=FC920760; organism=Citrus clementina; type=EST; length=630bp
AAGTTGAGAGCTCTCANACGATCGACGACGTCAAGGCCAAGATCCAGGAC
AAGGAAGGGATTCCGCCGGACCACCCGAGGCTGATCTTCGCCGGAAAGCA
ACTCGAGGACGGCCGCACCTTGGCCGATTACAATATCCAGAAGGAATCAA
CTCTTCACCTCGTGCTTCGTCTCCGTGGGGGCATGCAGATATTCGTCAAA
ACCCTAACGGGAAAGACGATTACCCTCGAAGTCGAGAGCTCCGACACGAT
CGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACC
AGCAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGAAGGACGCTC
GCGGATTACAACATTCAGAAGGAATCAACTCTTCATCTGGTTTTGCGTCT
GAGGGGTGGCATGCAGATTTTTGTTAAGACATTGACCGGGAAGACGATTA
CCCTGGAGGTAGAGAGTTCTGATACCATTGACAATGTCAAAGCCAAGATT
CAGGACAAGGAAGGGATCCCACCTGATCAGCAGAGGCTCATCTTCGCTGG
GAAGCAGCTTGAGGACGGGCGTACTCTGGCTGATTACAACATTCAGAAGG
AGTCCACCCTCCATCTCGTCCTCCGTCTCC