FC920760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: NEDD8_CAEEL (NEDD8 OS=Caenorhabditis elegans GN=ned-8 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20 Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76 HSP 2 Score: 90.5077 bits (223), Expect = 7.563e-18 Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 M I VKTLTGK I L++E +D ++ +K K+++KEGIPP QQRLIFAGKQ+ D +T ADY + S LHLVL L Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLAL 73 HSP 3 Score: 71.633 bits (174), Expect = 3.635e-12 Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182 +E + ++ +K K+++KEGIPP RLIFAGKQ+ D +T ADY + S LHLVL LRGG Sbjct: 17 IEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: RUB2_ARATH (NEDD8-like protein RUB2 OS=Arabidopsis thaliana GN=RUB2 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.055e-19 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 3 Query: 189 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 413 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL LRGG+ Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77 HSP 2 Score: 89.3521 bits (220), Expect = 1.685e-17 Identity = 43/71 (60.56%), Postives = 55/71 (77.46%), Query Frame = 3 Query: 417 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL L Sbjct: 3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLAL 73 HSP 3 Score: 73.1738 bits (178), Expect = 1.249e-12 Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 185 +E + TID +K ++++KEGIPP RLI+AGKQL D +T DY I+ S LHLVL LRGG+ Sbjct: 17 IEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 77
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: NEDD8_RAT (NEDD8 OS=Rattus norvegicus GN=Nedd8 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL L Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLAL 73 HSP 3 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182 +E + ++ +K ++++KEGIPP RLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 17 IEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: NEDD8_RABIT (NEDD8 OS=Oryctolagus cuniculus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL L Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLAL 73 HSP 3 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182 +E + ++ +K ++++KEGIPP RLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 17 IEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: NEDD8_MOUSE (NEDD8 OS=Mus musculus GN=Nedd8 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL L Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLAL 73 HSP 3 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182 +E + ++ +K ++++KEGIPP RLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 17 IEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: NEDD8_HUMAN (NEDD8 OS=Homo sapiens GN=NEDD8 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL L Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLAL 73 HSP 3 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182 +E + ++ +K ++++KEGIPP RLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 17 IEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: NEDD8_BOVIN (NEDD8 OS=Bos taurus GN=NEDD8 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76 HSP 2 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 40/73 (54.79%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 M I VKTLTGK I +++E +D ++ +K ++++KEGIPP QQRLI++GKQ+ D +T ADY I S LHLVL L Sbjct: 1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLAL 73 HSP 3 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182 +E + ++ +K ++++KEGIPP RLI++GKQ+ D +T ADY I S LHLVL LRGG Sbjct: 17 IEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAADYKILGGSVLHLVLALRGG 76
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: RUB3_ORYSJ (NEDD8-like protein RUB3 OS=Oryza sativa subsp. japonica GN=RUB3 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.524e-18 Identity = 41/76 (53.95%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T DY I+ S LHLVL LRGG Sbjct: 1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76 HSP 2 Score: 86.2705 bits (212), Expect = 1.426e-16 Identity = 38/73 (52.05%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 + + V+TLTGK I +++E +DT+D +K +++++EGIPP QQRLI+ GKQL D +T DY I+ S LHLVL L Sbjct: 1 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLAL 73 HSP 3 Score: 70.0922 bits (170), Expect = 1.058e-11 Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 3 Query: 3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182 +E + T+D +K +++++EGIPP RLI+ GKQL D +T DY I+ S LHLVL LRGG Sbjct: 17 IEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYKIEAGSVLHLVLALRGG 76
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: RUB3_ARATH (NEDD8-like protein RUB3 OS=Arabidopsis thaliana GN=RUB3 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.877e-18 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 410 M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL LRGG Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76 HSP 2 Score: 83.5741 bits (205), Expect = 9.245e-16 Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 M+I VKTLT K I +E+E +DTI+ +K +I++KEGIPP QR+++ GKQL D T YN+++ S LHLVL L Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLAL 73 HSP 3 Score: 70.8626 bits (172), Expect = 6.201e-12 Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = 3 Query: 3 VESSXTIDDVKAKIQDKEGIPPDHPRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 182 +E + TI+ +K +I++KEGIPP H R+++ GKQL D T YN+++ S LHLVL LRGG Sbjct: 17 IELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
BLAST of FC920760 vs. ExPASy Swiss-Prot
Match: NEDD8_DICDI (NEDD8 OS=Dictyostelium discoideum GN=nedd8 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.290e-17 Identity = 41/77 (53.25%), Postives = 58/77 (75.32%), Query Frame = 3 Query: 183 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGM 413 M I VKTLTGK I ++++ +D I +K ++++KEGIPP QQRLIF GKQ+ D + ++Y+I+ S LHLVL LRGG+ Sbjct: 1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLALRGGL 77 HSP 2 Score: 82.4185 bits (202), Expect = 2.060e-15 Identity = 38/73 (52.05%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 411 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 629 M I VKTLTGK I ++++ +D I +K ++++KEGIPP QQRLIF GKQ+ D + ++Y+I+ S LHLVL L Sbjct: 1 MLIKVKTLTGKEIEIDIDPTDKIQRIKERVEEKEGIPPSQQRLIFGGKQMGDDKPASEYSIEGGSVLHLVLAL 73 The following BLAST results are available for this feature:
BLAST of FC920760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920760 ID=FC920760; Name=FC920760; organism=Citrus clementina; type=EST; length=630bpback to top |