FC920761
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO11_ORYSJ (Protein argonaute 11 OS=Oryza sativa subsp. japonica GN=AGO11 PE=2 SV=2) HSP 1 Score: 311.997 bits (798), Expect = 1.920e-84 Identity = 155/212 (73.11%), Postives = 176/212 (83.02%), Query Frame = 3 Query: 57 VGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQ-KPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689 VGGRNTVL DA+ RRIPL++D PT+IFGADVTHP GEDSSPSIAAVVAS DWPEV+KY V +Q+HR+E+I DLF +D V GGMI+EL+ SFR+A G KP RIIFYRDGVSEGQF QVLL E+DAIRKACAS+E Y PPVTFVVVQKRHHTRLF +HH R+ +DRS NILPGTVVD+KICHP+EFDFYLCSH+GIQGTS P Sbjct: 581 VGGRNTVLEDALHRRIPLLTDMPTMIFGADVTHPPAGEDSSPSIAAVVASMDWPEVSKYKCSVSSQSHREEIIADLFTEVKDSQNRLVYGGMIRELIESFRKANGSYKPGRIIFYRDGVSEGQFSQVLLSEMDAIRKACASIEEGYLPPVTFVVVQKRHHTRLFPEDHHARDQMDRSRNILPGTVVDTKICHPSEFDFYLCSHSGIQGTSHP 792
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO17_ORYSJ (Protein argonaute 17 OS=Oryza sativa subsp. japonica GN=AGO17 PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 9.228e-79 Identity = 147/228 (64.47%), Postives = 176/228 (77.19%), Query Frame = 3 Query: 6 QMSKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689 +M+K ++A+VALKIN K+GGRNTVLVDA+ R+P V D PTI+FGA VTHPHPG+ +S SIAAVVASQDWPEVTKYAGL+ QA QE IQ LFK DP RG + GMIKE L+SF RAT +KP RIIFYRDGVS+GQ Q L++EL AI+ ACAS+ P+Y P VT+VV+QK HTRLFA ++++ N D + NI GTVVDS IC P +FDFYLCSH QGT RP Sbjct: 552 KMNKWYLASVALKINAKMGGRNTVLVDALEMRLPHVRDTPTIVFGAHVTHPHPGKANSSSIAAVVASQDWPEVTKYAGLISVQACHQESIQGLFKVQDDPERGTTTSGMIKEHLMSFYRATKRKPGRIIFYRDGVSKGQLPQALMHELGAIKMACASMGPDYNPLVTYVVLQKCRHTRLFA-DYYNANTHDSTANIRAGTVVDSNICQPNQFDFYLCSHRSTQGTKRP 778
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO13_ORYSJ (Protein argonaute 13 OS=Oryza sativa subsp. japonica GN=AGO13 PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.127e-75 Identity = 142/226 (62.83%), Postives = 173/226 (76.55%), Query Frame = 3 Query: 12 SKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689 +K ++ NVALKINVK ++++++ ++H PGEDS+ SIAAVVAS DWPE+TKY GLV AQ+HRQE+I+DLF +DPV+ V+GGMI+E LI+FR+ TG++P+RIIFYRDGVSEGQF +VLL+E+DAIRKACASLE Y PPVTFVVVQKRHHTRLF H R+ D+SGNILPGTV D +ICHPTEF FYLCSHAGIQGTSRP Sbjct: 511 NKQYLENVALKINVKKSQQSSLVL---------------------MSHTPPGEDSASSIAAVVASMDWPEITKYRGLVSAQSHRQEIIEDLFSVGKDPVK-VVNGGMIREFLIAFRKKTGRRPERIIFYRDGVSEGQFSRVLLHEMDAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPEVHGRRDMTDKSGNILPGTVKDRQICHPTEFYFYLCSHAGIQGTSRP 714
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO14_ORYSJ (Protein argonaute 14 OS=Oryza sativa subsp. japonica GN=AGO14 PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.056e-74 Identity = 149/241 (61.83%), Postives = 176/241 (73.03%), Query Frame = 3 Query: 9 MSKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQ------DPVRGA-------VSGGMIKELLISF-RRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689 + + + NV+LKINVK GGRN+VL + +P + TIIFGADVTHP GEDSS SIAAVVAS DWPE+TKY LV AQ RQE+IQDLF + P + A + GGM +ELL+SF + +KPQRIIFYRDGVS+GQF VLLYE+DAI+KA ASL+P Y+P VTFVVVQKRHHTRLF H ++ DRSGN+ PGTVVD+ ICHP+EFDFYLCSHAGIQGTSRP Sbjct: 716 LDRQFLENVSLKINVKAGGRNSVLQRPL---VPGGLENTTIIFGADVTHPASGEDSSASIAAVVASMDWPEITKYKALVSAQPPRQEIIQDLFTMTEVAQNADAPAQKAEGSKKNFICGGMFRELLMSFYSKNAKRKPQRIIFYRDGVSDGQFLHVLLYEMDAIKKAIASLDPAYRPLVTFVVVQKRHHTRLFPEVHGRQDLTDRSGNVRPGTVVDTNICHPSEFDFYLCSHAGIQGTSRP 953
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO18_ORYSJ (Protein argonaute 18 OS=Oryza sativa subsp. japonica GN=AGO18 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.882e-64 Identity = 126/224 (56.25%), Postives = 164/224 (73.21%), Query Frame = 3 Query: 21 HMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 692 + ANVALKIN K GGRN+V ++ + +P+VS PTIIFGADVTHP ++S+PSIA+VVAS DWPEVTKY +V QA R+E+IQDL +++ELL +F+R + +P+++IFYRDGVSEGQF QV+ E+ I KA SL +P +TF+VVQKRHHTRLF NN++D +D +GN+ PGTVVD+ ICHP EFDF+LCS AGI+GTSRP+ Sbjct: 793 YCANVALKINAKAGGRNSVFLN-VEASLPVVSKSPTIIFGADVTHPGSFDESTPSIASVVASADWPEVTKYNSVVRMQASRKEIIQDL-------------DSIVRELLNAFKRDSKMEPKQLIFYRDGVSEGQFQQVVESEIPEIEKAWKSLYAG-KPRITFIVVQKRHHTRLFPNNYNDPRGMDGTGNVRPGTVVDTVICHPREFDFFLCSQAGIKGTSRPS 1001
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO2_RABIT (Protein argonaute-2 (Fragment) OS=Oryctolagus cuniculus GN=EIF2C2 PE=1 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 6.644e-61 Identity = 127/223 (56.95%), Postives = 153/223 (68.61%), Query Frame = 3 Query: 24 MANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 692 ++N+ LKINVK+GG N +L + + P V +P I GADVTHP G+ PSIAAVV S D +Y V Q HRQE+IQDL M++ELLI F ++T KP RIIFYRDGVSEGQF QVL +EL AIR+AC LE +YQP +TF+VVQKRHHTRLF + ++R V +SGNI GT VD+KI HPTEFDFYLCSHAGIQGTSRP+ Sbjct: 541 LSNLCLKINVKLGGVNNIL---LPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL-------------AAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNER--VGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPS 744
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO2_MOUSE (Protein argonaute-2 OS=Mus musculus GN=Eif2c2 PE=1 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 6.644e-61 Identity = 127/223 (56.95%), Postives = 153/223 (68.61%), Query Frame = 3 Query: 24 MANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 692 ++N+ LKINVK+GG N +L + + P V +P I GADVTHP G+ PSIAAVV S D +Y V Q HRQE+IQDL M++ELLI F ++T KP RIIFYRDGVSEGQF QVL +EL AIR+AC LE +YQP +TF+VVQKRHHTRLF + ++R V +SGNI GT VD+KI HPTEFDFYLCSHAGIQGTSRP+ Sbjct: 561 LSNLCLKINVKLGGVNNIL---LPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL-------------AAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNER--VGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPS 764
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO2_HUMAN (Protein argonaute-2 OS=Homo sapiens GN=EIF2C2 PE=1 SV=3) HSP 1 Score: 233.802 bits (595), Expect = 6.644e-61 Identity = 127/223 (56.95%), Postives = 153/223 (68.61%), Query Frame = 3 Query: 24 MANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 692 ++N+ LKINVK+GG N +L + + P V +P I GADVTHP G+ PSIAAVV S D +Y V Q HRQE+IQDL M++ELLI F ++T KP RIIFYRDGVSEGQF QVL +EL AIR+AC LE +YQP +TF+VVQKRHHTRLF + ++R V +SGNI GT VD+KI HPTEFDFYLCSHAGIQGTSRP+ Sbjct: 560 LSNLCLKINVKLGGVNNIL---LPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL-------------AAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNER--VGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPS 763
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO2_RAT (Protein argonaute-2 OS=Rattus norvegicus GN=Eif2c2 PE=2 SV=2) HSP 1 Score: 233.417 bits (594), Expect = 8.677e-61 Identity = 127/223 (56.95%), Postives = 152/223 (68.16%), Query Frame = 3 Query: 24 MANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 692 ++N+ LKINVK+GG N +L + + P V +P I GADVTHP G+ PSIAAVV S D +Y V Q HRQE+IQDL M++ELLI F ++T KP RIIFYRDGVSEGQF QVL +EL AIR+AC LE YQP +TF+VVQKRHHTRLF + ++R V +SGNI GT VD+KI HPTEFDFYLCSHAGIQGTSRP+ Sbjct: 561 LSNLCLKINVKLGGVNNIL---LPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL-------------AAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKEYQPGITFIVVQKRHHTRLFCTDKNER--VGKSGNIPAGTTVDTKITHPTEFDFYLCSHAGIQGTSRPS 764
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO2_XENTR (Protein argonaute-2 OS=Xenopus tropicalis GN=eif2c2 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.480e-60 Identity = 126/223 (56.50%), Postives = 153/223 (68.61%), Query Frame = 3 Query: 24 MANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 692 ++N+ LKINVK+GG N +L + + P V +P I GADVTHP G+ PSIAAVV S D +Y V Q HRQE+IQDL M++ELLI F ++T KP RIIFYRDGVSEGQF QVL +EL AIR+AC LE +YQP +TF+VVQKRHHTRLF + ++R V +SGNI GT VD+KI HP+EFDFYLCSHAGIQGTSRP+ Sbjct: 572 LSNLCLKINVKLGGVNNIL---LPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMD-AHPNRYCATVRVQQHRQEIIQDL-------------SAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDRNER--VGKSGNIPAGTTVDTKITHPSEFDFYLCSHAGIQGTSRPS 775 The following BLAST results are available for this feature:
BLAST of FC920761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920761 ID=FC920761; Name=FC920761; organism=Citrus clementina; type=EST; length=692bpback to top |