FC920761
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO4_MOUSE (Protein argonaute-4 OS=Mus musculus GN=Eif2c4 PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 3.194e-55 Identity = 121/227 (53.30%), Postives = 152/227 (66.96%), Query Frame = 3 Query: 12 SKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 692 S ++N+ LK+N K+GG N VLV + P V +P I GADVTHP G+ PSIAAVV S D ++Y V Q RQE+ Q+L + Q+ V+ S M +ELLI F ++T KP RII+YR GVSEGQ QV EL AIRKAC SLE +Y+P +T++VVQKRHHTRLF + +R V +SGN+ GT VDS + HP+EFDFYLCSHAGIQGTSRP+ Sbjct: 548 SPQTLSNLCLKMNAKLGGINNVLVP---HQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSRYCATVRVQTSRQEITQELLYS-QEVVQDLTS--MARELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKRHHTRLFCADKMER--VGKSGNVPAGTTVDSTVTHPSEFDFYLCSHAGIQGTSRPS 765
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO4_CHICK (Protein argonaute-4 OS=Gallus gallus GN=EIF2C4 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.194e-55 Identity = 121/227 (53.30%), Postives = 152/227 (66.96%), Query Frame = 3 Query: 12 SKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 692 S ++N+ LKIN K+GG N VLV + P V +P I GADVTHP G+ PSIAAVV S D ++Y V Q RQE Q+L + Q+ ++ + M++ELLI F ++T KP RII+YR GVSEGQ QV EL AIRKAC SLE +Y+P +T++VVQKRHHTRLF + +R V +SGN+ GT VDS I HP+EFDFYLCSHAGIQGTSRP+ Sbjct: 481 SPQTLSNLCLKINAKLGGINNVLVP---HQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDG-HPSRYCATVRVQTSRQETSQELLYS-QEVIQDLTN--MVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKRHHTRLFCADKTER--VGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPS 698
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO1_MOUSE (Protein argonaute-1 OS=Mus musculus GN=Eif2c1 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.194e-55 Identity = 119/227 (52.42%), Postives = 147/227 (64.76%), Query Frame = 3 Query: 12 SKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 692 S ++N+ LKINVK+GG N +LV + V +P I GADVTHP G+ PSI AVV S D ++Y V Q RQE+I+DL M++ELLI F ++T KP RIIFYRDGV EGQ Q+L YEL AIR AC LE +YQP +T++VVQKRHHTRLF + ++R + +SGNI GT VD+ I HP EFDFYLCSHAGIQGTSRP+ Sbjct: 554 SPQTLSNLCLKINVKLGGINNILVP---HQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDL-------------SYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNER--IGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPS 761
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO1_HUMAN (Protein argonaute-1 OS=Homo sapiens GN=EIF2C1 PE=1 SV=3) HSP 1 Score: 214.927 bits (546), Expect = 3.194e-55 Identity = 119/227 (52.42%), Postives = 147/227 (64.76%), Query Frame = 3 Query: 12 SKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 692 S ++N+ LKINVK+GG N +LV + V +P I GADVTHP G+ PSI AVV S D ++Y V Q RQE+I+DL M++ELLI F ++T KP RIIFYRDGV EGQ Q+L YEL AIR AC LE +YQP +T++VVQKRHHTRLF + ++R + +SGNI GT VD+ I HP EFDFYLCSHAGIQGTSRP+ Sbjct: 554 SPQTLSNLCLKINVKLGGINNILVP---HQRSAVFQQPVIFLGADVTHPPAGDGKKPSITAVVGSMD-AHPSRYCATVRVQRPRQEIIEDL-------------SYMVRELLIQFYKSTRFKPTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEKDYQPGITYIVVQKRHHTRLFCADKNER--IGKSGNIPAGTTVDTNITHPFEFDFYLCSHAGIQGTSRPS 761
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.938e-52 Identity = 108/229 (47.16%), Postives = 147/229 (64.19%), Query Frame = 3 Query: 6 QMSKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATG-QKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689 +++ ++ NV LKIN K+GG N++L S IPLVS PTII G DV+H PG+ PSIAAVV+S++WP V+KY V +Q+ + E+I LFK P G+I+ELL+ F +TG +KP ++I +RDGVSE QF QVL ELD I +AC L+ N+ P T +V QK HHT+ F + N+ PGTVVD+ +CHP DFY+C+HAG+ GT+RP Sbjct: 593 RVNDQYITNVLLKINAKLGGLNSLLQIETSPSIPLVSKVPTIILGMDVSHGSPGQSDIPSIAAVVSSREWPLVSKYRASVRSQSPKLEMIDGLFK----PQGAQEDDGLIRELLVDFYTSTGKRKPDQVIIFRDGVSESQFTQVLNIELDQIIEACKFLDENWSPKFTLIVAQKNHHTKFFVPGSQN--------NVPPGTVVDNAVCHPRNNDFYMCAHAGMIGTTRP 809
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.256e-51 Identity = 104/229 (45.41%), Postives = 145/229 (63.32%), Query Frame = 3 Query: 6 QMSKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATG-QKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689 +++ ++ N+ LKIN K+GG N++L S IPLVS PTII G DV+H PG+ PSIAAVV+S+ WP ++KY V Q+ + E++ LFK RG G+I+E LI F ++G +KP +I +RDGVSE QF QV+ ELD I +AC L+ + P T +V QK HHT+ F + D N+ PGTVVD ++CHP +DFY+C+HAG+ GT+RP Sbjct: 601 RVNDQYLLNLLLKINAKLGGINSLLQIEASPSIPLVSKTPTIILGMDVSHGQPGQSDRPSIAAVVSSRQWPLISKYRASVHTQSPKLEMMSSLFKP-----RGTEDDGLIRESLIDFYTSSGKRKPDHVIVFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQSGSPD--------NVPPGTVVDKQVCHPRNYDFYMCAHAGMIGTTRP 816
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 4.622e-46 Identity = 103/229 (44.98%), Postives = 139/229 (60.70%), Query Frame = 3 Query: 6 QMSKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQ-KPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689 +M+ + NV LKIN K+GG N+ L IP+V+ PT+I G DV+H PG PSIAAVV S+ WP +++Y V Q+ + E+I LFK P+ G+I+ELL+ F + + Q KP++II +RDGVSE QF QVL EL+ I KA ++ P T ++ QK HHT+LF N D N+ PGTVVDS I HP ++DFY+ +HAG GTSRP Sbjct: 572 KMNDQYYTNVLLKINAKLGGMNSKLSLEHRHMIPIVNQTPTLILGMDVSHGSPGRADVPSIAAVVGSRCWPLISRYRASVRTQSPKVEMIDSLFK----PLDDGKDDGIIRELLLDFYKTSQQRKPKQIIIFRDGVSESQFSQVLNVELNQIIKAYQYMDQGPIPKFTVIIAQKNHHTKLFQENTPD--------NVPPGTVVDSGIVHPRQYDFYMYAHAGPIGTSRP 788
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO2_ORYSJ (Protein argonaute 2 OS=Oryza sativa subsp. japonica GN=AGO2 PE=2 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.345e-45 Identity = 105/228 (46.05%), Postives = 137/228 (60.09%), Query Frame = 3 Query: 6 QMSKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689 Q +M+N+ALKIN K+GG N + +P +S P + GADV HP PG SPSIAAVVAS D +KY + AQ HR E+IQ L G M KEL+ F + KPQRII++RDGVS+GQF VL EL + KA + + Y P +T +V +KRHHTRLF + + + ++GN+LPGTVVD+ + P +DFYLCSH G+ GTSRP Sbjct: 727 QGQDQYMSNLALKINGKIGGSN---IQLFGESLPRISGAPYMFIGADVNHPSPGNVESPSIAAVVASVD-QGASKYVPRIRAQPHRCEVIQHL-------------GDMCKELIGVFEKRNRVKPQRIIYFRDGVSDGQFDMVLNEELADMEKAIKTKD--YSPTITVIVAKKRHHTRLFPKDLNQQQT--KNGNVLPGTVVDTGVVDPAAYDFYLCSHNGLIGTSRP 933
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.942e-44 Identity = 100/233 (42.92%), Postives = 139/233 (59.66%), Query Frame = 3 Query: 6 QMSKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASL-----EPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689 +++ ++ NV LKIN K+GG N++L ++ IPL+S PTII G DV+H PG D PS+AAVV+S +WP ++KY VC Q+ R E+I LFK + G +I+E L+ F ++ ++DGVSEGQF QVL EL I KAC L + + P T +V QK HHT+ F + ++ N+ PGTVVD ICHP DFY+C+HAG+ GT+RP Sbjct: 582 KINDQYLTNVLLKINAKLGGLNSLLQIERNQAIPLLSKTPTIILGMDVSHGSPGRDDVPSVAAVVSSLEWPLISKYKASVCTQSPRLEMIDSLFK-----LVGNEDHVIIRESLMDFYNSSRG-------HKDGVSEGQFNQVLNIELAQIIKACEFLANEKNDSEWSPKFTVIVAQKNHHTKFFQTDRSNKVV-----NVPPGTVVDKGICHPRNCDFYMCAHAGMIGTTRP 797
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: TAG76_CAEEL (Putative protein tag-76 OS=Caenorhabditis elegans GN=tag-76 PE=2 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 1.644e-43 Identity = 98/225 (43.56%), Postives = 142/225 (63.11%), Query Frame = 3 Query: 27 ANVALKINVKVGGRNT-VLVDAISRRIPLVSDRPTIIFGADVTHPHPGED--SSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA 692 AN+ LK+N+K+GG N+ ++ D I+ + + D+PT++ G DVTHP E + PS+AA+VA+ D + A + + R+ ++ L I+E +I+F R T QKP RII YRDGVSEGQF +VL E+ +IR AC ++ +++PP+T++VVQKRHH R+F +D V ++ N+ PGT VD+ I P FDFYLCSH G+QGTSRPA Sbjct: 705 ANIVLKLNMKMGGINSRIVADKITNKY--LVDQPTMVVGIDVTHPTQAEMRMNMPSVAAIVANVDLLPQSYGANVKVQKKCRESVVYLL--------------DAIRERIITFYRHTKQKPARIIVYRDGVSEGQFSEVLREEIQSIRTACLAIAEDFRPPITYIVVQKRHHARIFCKYQND--MVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQGTSRPA 911 The following BLAST results are available for this feature:
BLAST of FC920761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920761 ID=FC920761; Name=FC920761; organism=Citrus clementina; type=EST; length=692bpback to top |