FC920761

Overview
NameFC920761
Unique NameFC920761
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO3_ORYSJ (Protein argonaute 3 OS=Oryza sativa subsp. japonica GN=AGO3 PE=2 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.902e-40
Identity = 102/225 (45.33%), Postives = 135/225 (60.00%), Query Frame = 3
Query:   21 HMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSS--PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689
            ++ N+ALKIN K+GG N  L D  S  IP+VS +  +  GADV HP PG  S   PSIAAVVAS D    +KY   + AQ HR E+IQ+L             G + KEL+ ++ +   +KP  II++RDGVS+GQF  VL  EL  +      +     P +T +V +KRHHTRLF  + + R    ++GN+LPGTVVD+ +  PT +DFYLCSH G  GTSRP
Sbjct:  765 YITNLALKINGKIGGSNMQL-DPDS--IPVVSAKDFMFIGADVNHPPPGNVSKDIPSIAAVVASVD-KGASKYVTRIRAQYHRCEMIQNL-------------GDICKELIGAYEKVNKKKPDSIIYFRDGVSDGQFDMVLNEELADMEN---KIMVGDYPKITVIVAKKRHHTRLFPKDRNQRQT--KNGNVLPGTVVDTDVVDPTAYDFYLCSHKGEVGTSRP 967          
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO1_SCHPO (Protein argonaute OS=Schizosaccharomyces pombe GN=ago1 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.190e-39
Identity = 97/228 (42.54%), Postives = 128/228 (56.14%), Query Frame = 3
Query:    6 QMSKHHMANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689
            Q    + AN+ +KINVKVGG N  L   I +  PL  + PT+I G DV HP  G  +  SIA++VAS D     KY  +  +Q   QE+I+ +               ++  LL  FR  T Q+PQRII++RDG SEGQF  V+  EL  I++AC SL P Y P +     QKRHH R F  N  D    DR+GN LPGT+++  + HP ++DFYL SH  +QG S P
Sbjct:  538 QSKPQYCANLGMKINVKVGGINCSL---IPKSNPL-GNVPTLILGGDVYHPGVGA-TGVSIASIVASVDL-NGCKYTAVSRSQPRHQEVIEGM-------------KDIVVYLLQGFRAMTKQQPQRIIYFRDGTSEGQFLSVINDELSQIKEACHSLSPKYNPKILVCTTQKRHHARFFIKNKSDG---DRNGNPLPGTIIEKHVTHPYQYDFYLISHPSLQGVSVP 743          
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: AGO2_DROME (Protein argonaute-2 OS=Drosophila melanogaster GN=AGO2 PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29
Identity = 85/222 (38.29%), Postives = 120/222 (54.05%), Query Frame = 3
Query:   24 MANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689
            + N+ LKIN K+ G N  + D    R+P++ +  T+  GADVTHP P +   PS+  V AS D P    Y      Q    E I+D+F    + +R      + KE    +R A    P  II+YRDGVS+GQF ++   EL  I++AC  +    +P +  V+V KRHHTR F +   D    ++  N+ PGTVVD  I HP E  F++ SH  IQGT++P
Sbjct:  929 IGNILLKINSKLNGINHKIKD--DPRLPMMKN--TMYIGADVTHPSPDQREIPSVVGVAASHD-PYGASYNMQYRLQRGALEEIEDMFSITLEHLR------VYKE----YRNAY---PDHIIYYRDGVSDGQFPKIKNEELRCIKQACDKV--GCKPKICCVIVVKRHHTRFFPSG--DVTTSNKFNNVDPGTVVDRTIVHPNEMQFFMVSHQAIQGTAKP 1128          
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: PIWL1_DANRE (Piwi-like protein 1 OS=Danio rerio GN=piwil1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15
Identity = 65/212 (30.66%), Postives = 107/212 (50.47%), Query Frame = 3
Query:   33 VALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVD-RSGNILPGTVVDSKICHPTEFDFYLCSHA 665
            +AL++N K+GG      +  S  IPL   R  +I G D  H         SI A+VAS +   ++++      Q   QE+I        D ++G++ G      L ++ +     P RII YRDGV +G    V+ YE+  I ++  ++  +Y+P ++ VVV+KR  +R FA        +D +  N  PGTV+D+++  P  +DF++ S A
Sbjct:  601 IALQMNCKMGG------ELWSVEIPL---RQLMIVGIDCYHDTAA--GKRSIGAMVASLN-QGMSRWFSKCVLQNRGQEII--------DALKGSLQGA-----LKAYLKYNNSLPSRIIVYRDGVGDGMLQSVVDYEVPQIMQSIKTMGQDYEPKLSVVVVKKRISSRFFAR-------IDGKIANPPPGTVIDTEVTRPEWYDFFIVSQA 780          
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: PIWL2_DANRE (Piwi-like protein 2 OS=Danio rerio GN=piwil2 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15
Identity = 68/219 (31.05%), Postives = 100/219 (45.66%), Query Frame = 3
Query:   33 VALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689
            + L+IN K+GG    +       +PL   +  ++ G DV H       S S+   VAS +   +TK+   V  Q   +E+I   F+              +   L  +       P++I+ YRDGVS+GQ   V  YE+  I K C    PNY+P + F+VVQKR  T L++         D  G   PGTV+D  + +    DFYL +H+  QG   P
Sbjct:  790 ILLQINCKLGGELWTV------NVPL---KYLMVIGVDVHHDT--SKKSRSVMGFVASLN-SMLTKWYSRVTFQMPNEEIING-FRV------------CLLAALQKYYEVNHAFPEKIVIYRDGVSDGQLKTVEHYEIPQILK-CFETIPNYEPKLAFIVVQKRISTTLYSYGS------DHFGTPSPGTVLDHTVTNRDWVDFYLMAHSIRQGCGLP 976          
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: PIWL2_ONCMY (Piwi-like protein 2 OS=Oncorhynchus mykiss GN=piwil2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 68/222 (30.63%), Postives = 105/222 (47.30%), Query Frame = 3
Query:   33 VALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQK---PQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689
            + L++N K+GG    +       +PL   +  ++ G DV H    ++ S  +   VAS +   +T++   V  Q   +E+I                 G    LL + ++  G     P++I+ YRDGVS+GQ   V LYE+  + K C    PNY+P + F+VVQKR  T L++ +       DR G   PGTV+D  + +    DFYL +H   QG   P
Sbjct:  798 ILLQMNCKLGGELWTV------NVPL---KHLMVIGVDVHHDTSKKNRS--VMGFVASLN-SLLTRWYSRVTFQMPNEEIIN----------------GFRVCLLAALQKYYGVNHNFPEKIVVYRDGVSDGQLKTVELYEIPQLLK-CFETFPNYEPKLAFIVVQKRVSTNLYSCSG------DRFGTPPPGTVLDHTVTNREWVDFYLMAHHVRQGCGLP 984          
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: PIWL1_HUMAN (Piwi-like protein 1 OS=Homo sapiens GN=PIWIL1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 69/219 (31.51%), Postives = 100/219 (45.66%), Query Frame = 3
Query:   33 VALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689
            +AL++N K+GG     VD     IPL   +  +I G D  H         SIA  VAS +   +T++      Q   QEL+  L    Q  +R             ++       P RII YRDGV +GQ   ++ YE+        S+   Y P +T +VV+KR +TR FA +        R  N LPGTV+D ++  P  +DF++ S A   G+  P
Sbjct:  604 IALQMNCKMGGE-LWRVD-----IPL---KLVMIVGIDCYHDMTA--GRRSIAGFVASIN-EGMTRWFSRCIFQDRGQELVDGLKVCLQAALR-------------AWNSCNEYMPSRIIVYRDGVGDGQLKTLVNYEVPQFLDCLKSIGRGYNPRLTVIVVKKRVNTRFFAQSG------GRLQNPLPGTVIDVEVTRPEWYDFFIVSQAVRSGSVSP 791          
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: PIWL1_CHICK (Piwi-like protein 1 OS=Gallus gallus GN=PIWIL1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 66/222 (29.73%), Postives = 100/222 (45.05%), Query Frame = 3
Query:   24 MANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689
            +  +AL++N K+GG      +  S  IPL   +  +I G D  H         SIA  VAS +  ++T++      Q+  QE++  L    Q  +R              + +     P RII YRDGV +GQ   ++ YE+        ++  +Y P +T +VV+KR  TR FA       A     N  PGTVVD ++  P  +DF++ S A   G   P
Sbjct:  607 VTKIALQMNCKMGG------ELWSVEIPL---KQLMIVGIDCYHDTLS--GKQSIAGFVASLN-EKMTRWFSRCVVQSRGQEIVDGLKACLQTALR-------------EWFKWNKYLPSRIIVYRDGVGDGQLNTLVNYEVPQFLDCLKTVGKDYNPRLTVIVVKKRVSTRFFA------QAGGGLKNPPPGTVVDIEVTRPEWYDFFIVSQAVRNGCVAP 797          
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: PIWL1_MOUSE (Piwi-like protein 1 OS=Mus musculus GN=Piwil1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.799e-13
Identity = 69/219 (31.51%), Postives = 100/219 (45.66%), Query Frame = 3
Query:   33 VALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689
            +AL++N K+GG     VD     +PL   +  +I G D  H         SIA  VAS +   +T++      Q   QEL+  L    Q  +R A SG                 P R+I YRDGV +GQ   ++ YE+        S+   Y P +T +VV+KR + R FA +        R  N LPGTV+D ++  P  +DF++ S A   G+  P
Sbjct:  605 IALQMNCKMGGE-LWRVD-----MPL---KLAMIVGIDCYHDTTA--GRRSIAGFVASIN-EGMTRWFSRCVFQDRGQELVDGLKVCLQAALR-AWSG------------CNEYMPSRVIVYRDGVGDGQLKTLVNYEVPQFLDCLKSVGRGYNPRLTVIVVKKRVNARFFAQSG------GRLQNPLPGTVIDVEVTRPEWYDFFIVSQAVRSGSVSP 792          
BLAST of FC920761 vs. ExPASy Swiss-Prot
Match: PIWIL_DUGJA (Piwi-like protein OS=Dugesia japonica GN=iwi PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 60/193 (31.09%), Postives = 88/193 (45.60%), Query Frame = 3
Query:  120 RPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGAVSGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASL--EPNYQ-PPVTFVVVQKRHHTRLFANNHHDRNAVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRP 689
            RPT+I G D  H    + S  SI A V S +    ++Y     +   +QE    L              G  K  L  F+R     P RI+ YRDGV + Q      +E+DA++    ++  E   Q P + +V+V+KR  T+LF          +R  N  PGT+VD +I  P  F+F+L S    +GT+ P
Sbjct:  570 RPTMIVGMDTFH---NKGSKKSIHASVFSIN-STFSQYMSFANSPKGKQEFHDTL-------------SGNFKAALTEFKRIYKILPVRIMVYRDGVGDSQLQFTKQFEVDAMKPLVENIYKENGCQVPQIIYVIVKKRIGTKLF----------NRGDNANPGTIVDKEIVKPNFFEFFLVSQRVTRGTASP 735          
The following BLAST results are available for this feature:
BLAST of FC920761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
AGO3_ORYSJ2.902e-4045.33Protein argonaute 3 OS=Oryza sativa subsp. japonic... [more]
AGO1_SCHPO4.190e-3942.54Protein argonaute OS=Schizosaccharomyces pombe GN=... [more]
AGO2_DROME1.765e-2938.29Protein argonaute-2 OS=Drosophila melanogaster GN=... [more]
PIWL1_DANRE3.231e-1530.66Piwi-like protein 1 OS=Danio rerio GN=piwil1 PE=1 ... [more]
PIWL2_DANRE7.198e-1531.05Piwi-like protein 2 OS=Danio rerio GN=piwil2 PE=1 ... [more]
PIWL2_ONCMY9.400e-1530.63Piwi-like protein 2 OS=Oncorhynchus mykiss GN=piwi... [more]
PIWL1_HUMAN4.665e-1431.51Piwi-like protein 1 OS=Homo sapiens GN=PIWIL1 PE=1... [more]
PIWL1_CHICK1.773e-1329.73Piwi-like protein 1 OS=Gallus gallus GN=PIWIL1 PE=... [more]
PIWL1_MOUSE8.799e-1331.51Piwi-like protein 1 OS=Mus musculus GN=Piwil1 PE=1... [more]
PIWIL_DUGJA1.960e-1231.09Piwi-like protein OS=Dugesia japonica GN=iwi PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC32012F12EF RVDevelop1 Citrus clementina cDNA clone C32012F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920761 ID=FC920761; Name=FC920761; organism=Citrus clementina; type=EST; length=692bp
GTTTTCAAATGAGCAAGCACCACATGGCCAATGTGGCTTTGAAGATAAAT
GTGAAGGTTGGAGGGAGGAATACTGTGCTTGTTGATGCAATATCAAGGCG
TATACCTCTAGTCAGTGACAGACCCACTATCATTTTTGGTGCTGATGTCA
CCCATCCTCACCCTGGAGAGGATTCAAGCCCGTCTATTGCCGCTGTCGTA
GCTTCTCAGGATTGGCCAGAGGTCACAAAGTATGCTGGATTGGTTTGTGC
TCAAGCTCATAGGCAGGAGCTCATTCAAGACTTGTTCAAGACATGGCAGG
ATCCTGTAAGAGGAGCAGTGTCTGGTGGGATGATCAAGGAACTCCTTATA
TCTTTCCGTAGAGCTACTGGACAAAAGCCTCAGCGCATAATCTTTTACAG
GGATGGTGTCAGTGAAGGACAGTTCTATCAAGTATTATTGTATGAACTTG
ATGCTATCCGTAAGGCATGCGCCTCCTTGGAACCAAACTATCAGCCTCCT
GTGACTTTTGTTGTGGTTCAGAAGCGTCACCACACTAGGTTGTTTGCCAA
CAACCATCATGATCGCAATGCAGTTGACAGGAGTGGAAATATATTGCCTG
GTACTGTTGTGGATTCAAAAATTTGTCACCCAACTGAGTTTGACTTTTAC
CTCTGTAGCCATGCTGGAATACAGGGTACAAGCCGTCCTGCC
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