FC920768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920768 vs. ExPASy Swiss-Prot
Match: ETFB_BRAJA (Electron transfer flavoprotein subunit beta OS=Bradyrhizobium japonicum GN=etfB PE=3 SV=2) HSP 1 Score: 268.085 bits (684), Expect = 3.463e-71 Identity = 139/201 (69.15%), Postives = 164/201 (81.59%), Query Frame = 1 Query: 28 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPI 630 MK++V +KRVVDY VK+RVK D +GVE NVKMSMNPF EIA+EEALR+KE G A+EVV VS+GPAQ +T+RTGLAMGADRG+ V+A G + PL VAKILK + E E+PGLIILGKQAIDDD NQTGQM+A LL W Q TFASK L+ E V REVDGGL+T++L PA++TTDLRLN+PRYA+LPNIMKAK KPI Sbjct: 1 MKVLVPVKRVVDYNVKVRVKGDGSGVELANVKMSMNPFDEIAVEEALRLKEGGKATEVVVVSIGPAQASETIRTGLAMGADRGILVKAEGTVEPLAVAKILKKVAEEEQPGLIILGKQAIDDDSNQTGQMLAALLGWSQATFASK--LEVEGSDFKVTREVDGGLQTVKLKGPAIVTTDLRLNEPRYASLPNIMKAKKKPI 199
BLAST of FC920768 vs. ExPASy Swiss-Prot
Match: ETFB_PSEAE (Electron transfer flavoprotein subunit beta OS=Pseudomonas aeruginosa GN=etfB PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 7.984e-68 Identity = 128/206 (62.14%), Postives = 167/206 (81.07%), Query Frame = 1 Query: 28 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKNILP 645 MK++VA+KRVVDY VK+RVK+D +GV+ NVKMSMNPFCEIA+EEA+R+KE G+A+E+VAVS+GP + LRT LA+GADR + VE+ +L L VAK+LK++V+ E+P L+ILGKQAID D NQTGQM+A L + QGTFASKV + +K V RE+DGGL+T+ L+LPA++TTDLRLN+PRYA+LPNIMKAK KP+ + P Sbjct: 1 MKVLVAVKRVVDYNVKVRVKADNSGVDLANVKMSMNPFCEIAVEEAVRLKEKGVATEIVAVSVGPTAAQEQLRTALALGADRAILVESNDELNSLAVAKLLKAVVDKEQPQLVILGKQAIDSDNNQTGQMLAALTGYAQGTFASKVEVAGDK--VNVTREIDGGLQTVALNLPAIVTTDLRLNEPRYASLPNIMKAKKKPLDVVTP 204
BLAST of FC920768 vs. ExPASy Swiss-Prot
Match: ETFB_PARDE (Electron transfer flavoprotein subunit beta OS=Paracoccus denitrificans GN=etfB PE=1 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.458e-61 Identity = 124/205 (60.49%), Postives = 154/205 (75.12%), Query Frame = 1 Query: 28 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG----QLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPI 630 MK++V +KR++DY VK RVKSD +GV+ NVKMSMNPF EIA+EEA+R+KE G A E++AVS+G Q +TLRT LAMGADR + V AA + PL VAKIL ++ E LII GKQAID+D N TGQM+A +L W Q TFASKV ++ K A V REVDGGL+T+ + LPAV+T DLRLN+PRYA+LPNIMKAK KP+ Sbjct: 1 MKVLVPVKRLIDYNVKARVKSDGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAK--AKVTREVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMKAKKKPL 203
BLAST of FC920768 vs. ExPASy Swiss-Prot
Match: ETFB_YEAST (Probable electron transfer flavoprotein subunit beta OS=Saccharomyces cerevisiae GN=YGR207C PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.787e-51 Identity = 109/210 (51.90%), Postives = 146/210 (69.52%), Query Frame = 1 Query: 25 EMKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESG--LASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQ--LYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKV-VLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKNI 639 +++I+V +KRVVD+ +K RV TG+ET+ +K S+NPF +IA+EEA+RIKE L AVS+G A+ D LR LA G D +++ G+ + PL +AKILK++VE + L+++GKQAIDDDCN TGQM+AGLL+WPQ T A+KV LD + V RE+D G E +E LP VITTDLRLN PRY LP +MKAK KPI+ + Sbjct: 6 QLRILVPVKRVVDFQIKPRVNKTLTGIETSGIKFSINPFDDIAVEEAIRIKEKNKSLVESTHAVSIGSAKAQDILRNCLAKGIDTCSLIDSVGKENIEPLAIAKILKAVVEKKGSNLVLMGKQAIDDDCNNTGQMLAGLLNWPQATNAAKVEFLDNGR--VQVTREIDDGEEVIEASLPMVITTDLRLNTPRYVGLPKLMKAKKKPIEKL 213
BLAST of FC920768 vs. ExPASy Swiss-Prot
Match: ETFB_SCHPO (Probable electron transfer flavoprotein subunit beta OS=Schizosaccharomyces pombe GN=SPAC1805.02c PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.769e-47 Identity = 99/211 (46.92%), Postives = 142/211 (67.30%), Query Frame = 1 Query: 22 AEMKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKES--GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG-QLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKNILP 645 ++++I+V +KR +DY +K R+ + +T V+ + KMS+NPFC+IA+EEA+R+KE+ + + V+ G LR LA G R + +L PL+VAK+LK+ VE EK L++LGKQAIDDD +QTG M+A +L WPQ T ASKV ++ +K +V RE+DGG ETL LPA+ITTDLRLN PR+A L +MKA+ P+ + P Sbjct: 2 SKIRILVGVKRTLDYMLKPRINATKTAVDLSGQKMSINPFCDIAVEEAIRMKETLKNRIEDTLVVTAGQTSSEPILRQCLAKGIGRAALINVGEKELEPLSVAKLLKATVEKEKSNLVLLGKQAIDDDAHQTGGMLAAMLGWPQFTSASKVRIEGDK--VIVTREIDGGEETLSSTLPAIITTDLRLNVPRFANLAKVMKARKAPLGKMSP 210
BLAST of FC920768 vs. ExPASy Swiss-Prot
Match: ETFB_METME (Electron transfer flavoprotein subunit beta OS=Methylophilus methylotrophus GN=etfB PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.126e-28 Identity = 74/208 (35.58%), Postives = 120/208 (57.69%), Query Frame = 1 Query: 28 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLAS-EVVAVSMGPAQCVDTLRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGG-LETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKNI 639 MKI+VA+K+ ++ D V+ + + +N + + +LEEA++IKES EVV VS+GP + ++LR LA GADR V V +AA + V +IL +++ E P ++ G Q+ D TG VA L+WP + + A++ RE++GG L+ +E++ PAV+T L +N+PRYA+L I +A +KPI+ + Sbjct: 1 MKILVAVKQTAALEEDFEIREDGMDVDEDFMMYDLNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKPGDNKAVIRRELEGGMLQEVEINCPAVLTIQLGINKPRYASLRGIKQAATKPIEEV 208
BLAST of FC920768 vs. ExPASy Swiss-Prot
Match: ETFB_BACSU (Electron transfer flavoprotein subunit beta OS=Bacillus subtilis GN=etfB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.071e-22 Identity = 66/207 (31.88%), Postives = 115/207 (55.56%), Query Frame = 1 Query: 28 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYP---LTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKNI 639 M + V +KR D KI +++ + ++ + + +NP+ E A+EEA+++KE + AV++G + LRT LAMG D+ V + L +++++L ++ ++ LI+ G AID Q +A LL P T +K+ ++ A ER+V+G +E ++ LP ++T LN+PRY +LP IMKAK KP++ + Sbjct: 1 MNLFVLMKRTFDTEEKIVIETGK--IQDDGAEWIINPYDEYAIEEAIQLKEKH-GGTITAVTVGGEEAEKELRTALAMGCDQAVLINIEDDLDEPDQYSISQVLYHYMKDQEFDLILGGNVAIDGGSGQVAPRLAELLDIPCITTITKLEINGTD--AEAERDVEGDVEKIKTTLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLEEL 202
BLAST of FC920768 vs. ExPASy Swiss-Prot
Match: ETFB_MEGEL (Electron transfer flavoprotein subunit beta OS=Megasphaera elsdenii GN=etfB PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.623e-22 Identity = 77/215 (35.81%), Postives = 113/215 (52.56%), Query Frame = 1 Query: 28 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGAD----------RGVHVEAAGQLYPLTVA-KILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKNI 639 M+I+V +K+V D A ++++ + V V NPF + ALE AL +K++ ++ +SMGP Q D LR GLAMGAD G A G Y L A K L + +E+ +I+ GKQAID D Q G +A L PQ T+A + ++ +K V++E + G E P +IT LN+PR+ T+ MKAK + I N+ Sbjct: 1 MEILVCVKQVPDTA-EVKIDPVKHTVIRAGVPNIFNPFDQNALEAALALKDADKDVKITLLSMGPDQAKDVLREGLAMGADDAYLLSDRKLGGSDTLATG--YALAQAIKKLAADKGIEQFDIILCGKQAIDGDTAQVGPQIACELGIPQITYARDIKVEGDK--VTVQQENEEGYIVTEAQFPVLITAVKDLNEPRFPTIRGTMKAKRREIPNL 210
BLAST of FC920768 vs. ExPASy Swiss-Prot
Match: ETFB_CLOTS (Electron transfer flavoprotein subunit beta OS=Clostridium thermosaccharolyticum GN=etfB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.475e-21 Identity = 73/209 (34.93%), Postives = 107/209 (51.20%), Query Frame = 1 Query: 28 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVE----AAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIKNIL 642 M I+V IK+V D ++R+ + V +NP + ALEEA+RI+E + +V +SMGP Q LR LAMGAD + A Y AK L +E + ++ G+QAID D Q G +A L PQ T+ KV ++ +K +VER ++ G E +E+ P ++T LN PRY ++ I A +K IL Sbjct: 1 MNILVLIKQVPD-TNEVRIDPVTKTLIREGVPSIINPDDKNALEEAIRIREK-VGGKVTVISMGPTQAEVALREALAMGADEAYLLTDRAFAGADTY--ATAKALSKAIEKFQYDIVFCGRQAIDGDTAQVGPQIAEQLDIPQVTYVRKVEIEGDK--LIVERALEDGYEIIEVKTPVLLTAIKELNVPRYPSIKGIFNAYNKKEVKIL 203
BLAST of FC920768 vs. ExPASy Swiss-Prot
Match: ETFB_CLOAB (Electron transfer flavoprotein subunit beta OS=Clostridium acetobutylicum GN=etfB PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 1.994e-18 Identity = 66/204 (32.35%), Postives = 105/204 (51.47%), Query Frame = 1 Query: 28 MKIMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMKAKSKPIK 633 M I+V +K+V D A ++R+ + + V +NP + ALEEAL +K++ + V +SMGP Q + L LAMGAD V + A G L + + + ++ K ++ G+QAID D Q G +A L PQ T+ KV +D + + + + G E +E+ P ++T LN PRY ++ I A K +K Sbjct: 1 MNIVVCLKQVPDTA-EVRIDPVKGTLIREGVPSIINPDDKNALEEALVLKDN-YGAHVTVISMGPPQAKNALVEALAMGADEAVLLTDRAFGGADTLATSHTIAAGIKKLKYDIVFAGRQAIDGDTAQVGPEIAEHLGIPQVTYVEKVEVDGD--TLKIRKAWEDGYEVVEVKTPVLLTAIKELNVPRYMSVEKIFGAFDKEVK 200 The following BLAST results are available for this feature:
BLAST of FC920768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920768 ID=FC920768; Name=FC920768; organism=Citrus clementina; type=EST; length=728bpback to top |