FC920781

Overview
NameFC920781
Unique NameFC920781
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length778
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC920781_ssr32 microsatellite FC920781_ssr32:32..47. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig14439 contig Ccv1_Contig14439:1..773. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 60.8474 bits (146), Expect = 2.241e-17
Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = 3
Query:  243 QAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGP-SRCSSCKKRVGL 584
            QA    P+LC + CGF+G+ AT++MCS CY+   L  + A +A     S+   ++++  + +V + +  V ++ V     S     +    E      K+ P +RC+SCKK+VGL
Sbjct:  196 QASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCL-LNGATMATGPSSSVAAASAATVATGAVTSDSCSVPSAEVNGAAFS-----SKNNPEPATVVEKKAPANRCASCKKKVGL 304          

HSP 2 Score: 48.9062 bits (115), Expect = 2.241e-17
Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 2
Query:  587 GFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIKA 697
            GF CR    YC +HRY E+H C FD++ A+RDAI +A
Sbjct:  306 GFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARA 342          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 1.878e-16
Identity = 21/37 (56.76%), Postives = 30/37 (81.08%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIK 694
            TGF+CR  +L+C  HRYS++H C +DY++AARDAI +
Sbjct:  115 TGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIAR 151          

HSP 2 Score: 50.0618 bits (118), Expect = 1.878e-16
Identity = 40/134 (29.85%), Postives = 62/134 (46.27%), Query Frame = 3
Query:  213 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQ-----ASSVEPKIISVQPSCASELSESVEAKP-----KEGPSRCSSCKKRVGL 584
            +  D + T  +AP     LC N+CGF G+ AT N+C  C+           LAA         T+S++   S+++  +D Q     A  VEP+  +  P    E++ ++   P         +RCS C+KRVGL
Sbjct:    5 DKKDQEPTELRAPEI--TLCANSCGFPGNPATQNLCQNCF-----------LAA---------TASTSSPSSLSSPVLDKQPPRPAAPLVEPQ--APLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGL 114          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.878e-16
Identity = 21/37 (56.76%), Postives = 30/37 (81.08%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIK 694
            TGF+CR  +L+C  HRYS++H C +DY++AARDAI +
Sbjct:  115 TGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIAR 151          

HSP 2 Score: 50.0618 bits (118), Expect = 1.878e-16
Identity = 40/134 (29.85%), Postives = 62/134 (46.27%), Query Frame = 3
Query:  213 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQ-----ASSVEPKIISVQPSCASELSESVEAKP-----KEGPSRCSSCKKRVGL 584
            +  D + T  +AP     LC N+CGF G+ AT N+C  C+           LAA         T+S++   S+++  +D Q     A  VEP+  +  P    E++ ++   P         +RCS C+KRVGL
Sbjct:    5 DKKDQEPTELRAPEI--TLCANSCGFPGNPATQNLCQNCF-----------LAA---------TASTSSPSSLSSPVLDKQPPRPAAPLVEPQ--APLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGL 114          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.416e-16
Identity = 46/149 (30.87%), Postives = 69/149 (46.31%), Query Frame = 3
Query:  261 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQ----PSCAS-------------------------------ELSESVEAKPKEGPSRCSSCKKRVGL 584
            P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A +T+D  +SS++P  +S Q     S AS                               E S+S+E KPK+  +RC  C+K+VGL
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSTLDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDLQASVSDTAQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGL 158          

HSP 2 Score: 45.4394 bits (106), Expect = 2.416e-16
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIK 694
            TGF+CR   +YC  HRYS+ HNC ++Y+  A + I K
Sbjct:  159 TGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 195          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 3.141e-16
Identity = 44/149 (29.53%), Postives = 64/149 (42.95%), Query Frame = 3
Query:  261 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQ-----------------------------------PSCASELSESVEAKPKEGPSRCSSCKKRVGL 584
            P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S     V   S S      +GS   A + +D  ASSV+P  +S Q                                      + E S+S+E KPK+  +RC  C+K+VGL
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAPSVTSLSESLPVQCTDGSVPEAQSALDSTASSVQPSPVSNQSLLSESVASSQVDSTSVDKAIPETEDLQASVSETAQQASEEQSKSLE-KPKQKKNRCFMCRKKVGL 158          

HSP 2 Score: 45.4394 bits (106), Expect = 3.141e-16
Identity = 18/37 (48.65%), Postives = 25/37 (67.57%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIK 694
            TGF+CR   +YC  HRYS+ HNC ++Y+  A + I K
Sbjct:  159 TGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRK 195          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 1.967e-15
Identity = 43/156 (27.56%), Postives = 59/156 (37.82%), Query Frame = 3
Query:  258 GPILCINNCGFFGSVATMNMCSKCYKDIMLKQ--------------------DQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSV-----------------------EPKIISVQPSCASELSESVEAK----PKEGPSRCSSCKKRVGL 584
            GP+LC   CGF+G+  T  MCS CYK+ + +Q                    D A +  +  G  +N    + GS S  +  V V A  V                       EP +    PS +   S   E K    PK   +RC  C+K+VGL
Sbjct:   10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADAG--LNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSSSQSEEKAPELPKPKKNRCFMCRKKVGL 163          

HSP 2 Score: 49.2914 bits (116), Expect = 1.967e-15
Identity = 20/37 (54.05%), Postives = 25/37 (67.57%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIK 694
            TGF CR   L+C  HRYS++HNCP+DY+  A   I K
Sbjct:  164 TGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRK 200          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.995e-15
Identity = 20/37 (54.05%), Postives = 29/37 (78.38%), Query Frame = 2
Query:  584 TGFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIK 694
            TGF+CR   L+C  HRYS++H+C +DY+TA R+AI +
Sbjct:  111 TGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIAR 147          

HSP 2 Score: 48.9062 bits (115), Expect = 1.995e-15
Identity = 32/106 (30.19%), Postives = 50/106 (47.17%), Query Frame = 3
Query:  267 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGL 584
            LC NNCG   + AT NMC KC+   ++    A       GSI+  ++ S    S  A  V      + P+ I           ++V+ + ++  +RCS C+K+VGL
Sbjct:   25 LCTNNCGVTANPATNNMCQKCFNASLV---SAAAGVVESGSILKRSARSVNLRSSPAKVV------IRPREI-----------DAVKKRDQQIVNRCSGCRKKVGL 110          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP4_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.998e-15
Identity = 48/132 (36.36%), Postives = 67/132 (50.76%), Query Frame = 3
Query:  228 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLQDSNVAXGTYTVC 623
            +E  C+ P EG  LC+NNCGFFGS ATMN+CS CY D+ LKQ Q     S++ S ++   +       A   +     + E K I +          + +  P + P+RC+ C+KRVGL       GT T C
Sbjct:    3 EEHRCETP-EGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLSPVIAPVLENYAAELEIPTTKKTEEKKPIQI---------PTEQPSPPQRPNRCTVCRKRVGLTGFMCRCGT-TFC 123          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP2_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Oryza sativa subsp. japonica GN=SAP2 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 5.725e-15
Identity = 20/37 (54.05%), Postives = 29/37 (78.38%), Query Frame = 2
Query:  587 GFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIKA 697
            GF+CR   ++C +HRYS++H+C +DYR A RDAI +A
Sbjct:  100 GFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARA 136          

HSP 2 Score: 49.6766 bits (117), Expect = 5.725e-15
Identity = 38/119 (31.93%), Postives = 51/119 (42.86%), Query Frame = 3
Query:  231 ETGCQAPPEGPIL-CINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGL 584
            E G +   E P L C N CGFFGS  T  +CSKCY+  ++ Q  A  AA+          S+   + V  A          P+ + V             AK K   SRC++C + VGL
Sbjct:    2 EQGSERQDERPPLPCANGCGFFGSADTRGLCSKCYRQTVMSQASAPSAAA---------QSAEHDQVVLPA----------PEGVPVDEGAMPPPPPRHGAKTK---SRCAACGRSVGL 98          
BLAST of FC920781 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 9.454e-15
Identity = 42/126 (33.33%), Postives = 59/126 (46.83%), Query Frame = 3
Query:  213 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSV--EPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGL 584
            E  +       A  E   LC + CGFFGS  T NMCSKCY+D +        A S + S    +SSS  + S    TV +  ++    P +   +    +  S S  A  K  P+RC +C+K+VGL
Sbjct:   62 EEEEASTAAAAAADEQLALCSSGCGFFGSKETNNMCSKCYRDHL-------KATSPLFS----SSSSPATASTTDITVPIAPATTAPTPSLKGKEEEATAAASSSAAAAAK--PNRCVACRKKVGL 174          

HSP 2 Score: 40.4318 bits (93), Expect = 9.454e-15
Identity = 14/36 (38.89%), Postives = 25/36 (69.44%), Query Frame = 2
Query:  587 GFKCRXWYLYCVSHRYSEQHNCPFDYRTAARDAIIK 694
            GF+CR    +C +HR++++H C FD++ + R+ I K
Sbjct:  176 GFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAK 211          
The following BLAST results are available for this feature:
BLAST of FC920781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
SAP3_ORYSJ2.241e-1731.30Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSJ1.878e-1656.76Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI1.878e-1656.76Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_PONAB2.416e-1630.87AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_BOVIN3.141e-1629.53AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
ZFAN5_MOUSE1.967e-1527.56AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
SAP5_ARATH1.995e-1554.05Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ARATH2.998e-1536.36Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ORYSJ5.725e-1554.05Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP12_ORYSJ9.454e-1533.33Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC32013A02EF RVDevelop1 Citrus clementina cDNA clone C32013A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920781 ID=FC920781; Name=FC920781; organism=Citrus clementina; type=EST; length=778bp
CCCCCGGGGGAAGACTTTTTAAAAAAATCTTGAGAGAGAGAGAGAGACAC
CCGGAAAGGGAAACGAGGACGTCTCTAATCGGTTTTTGCCTGCTCTCTCC
CCGTAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATTGGATGCTGGC
TTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTCTTCTGTTGCT
CGCAGGGGTGGTGAAAACATGGACCATGATGAGACTGGATGCCAAGCTCC
TCCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTCTTTGGAAGTG
TGGCTACTATGAATATGTGTTCCAAATGCTACAAGGATATAATGCTGAAA
CAGGATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCATTGTGAATGA
AACGTCAAGCAGCAATGGAAGTGAATCTGTTGCTGCTGCCACTGTTGATG
TGCAAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCAGCCATCATGT
GCTTCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGGTCCCAG
CCGGTGTAGCAGTTGCAAGAAGCGTGTTGGTTTACAGGATTCAAATGTCG
CTGNTGGTACTTATACTGTGTGTCACATCGCTATTCGGAACAACATAACT
GCCCCTTTGACTACCGCACTGCTGCTAGGGATGCTATAATTAAAGCAACC
CTGTGATCAGGCTGAGAAGCTAGATAAATCTAGATCAATGGATGAGGTTC
AATATCAAGATGATGACTTGCTCATCTG
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