FC920786

Overview
NameFC920786
Unique NameFC920786
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length446
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13179 contig Ccv1_Contig13179:268..714. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920786 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 2.392e-53
Identity = 90/129 (69.77%), Postives = 100/129 (77.52%), Query Frame = 3
Query:    3 AEFIAXXXXXXXXXXXXIGYKSQTDPNLN----TDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLILALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYTR 377
            AEFIA            IGYK QTD + +       CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+ ALLYMVAQCLGA+CG G VKAFQ +Y++RYGGGAN LA GY+R
Sbjct:   46 AEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSR 174          

HSP 2 Score: 46.9802 bits (110), Expect = 2.392e-53
Identity = 21/24 (87.50%), Postives = 23/24 (95.83%), Query Frame = 2
Query:  374 KGTGLGAEIIGTFVLVYTVFSATD 445
            +G GLGAEI+GTFVLVYTVFSATD
Sbjct:  174 RGAGLGAEIVGTFVLVYTVFSATD 197          
BLAST of FC920786 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.392e-53
Identity = 90/127 (70.87%), Postives = 100/127 (78.74%), Query Frame = 3
Query:    3 AEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLILALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYTR 377
            AEFIA            IGYK QTD + +     CGGVG+LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+ A+LY+VAQCLGAICG G VKAFQ +Y+NRYGGGAN LA GY++
Sbjct:   46 AEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSK 172          

HSP 2 Score: 48.1358 bits (113), Expect = 2.392e-53
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 2
Query:  374 KGTGLGAEIIGTFVLVYTVFSATD 445
            KGTGL AEIIGTFVLVYTVFSATD
Sbjct:  172 KGTGLAAEIIGTFVLVYTVFSATD 195          
BLAST of FC920786 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.393e-53
Identity = 88/127 (69.29%), Postives = 100/127 (78.74%), Query Frame = 3
Query:    3 AEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLILALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYTR 377
            AEF+A            IGYK QTD + + D   CGGVG+LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+ A+LY+VAQCLGA+CG   VK FQ S+Y+RYGGGANELA GY++
Sbjct:   40 AEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSK 166          

HSP 2 Score: 48.1358 bits (113), Expect = 2.393e-53
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 2
Query:  374 KGTGLGAEIIGTFVLVYTVFSATD 445
            KGTGL AEIIGTFVLVYTVFSATD
Sbjct:  166 KGTGLAAEIIGTFVLVYTVFSATD 189          
BLAST of FC920786 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.390e-52
Identity = 87/127 (68.50%), Postives = 98/127 (77.17%), Query Frame = 3
Query:    3 AEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLILALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYTR 377
            AEF+A            IGYK Q+DP  N     C GVGILGIAWAFGGMIFILVYCTAG+SGGHINPAVTFGLFL RKVSL+ A+LY+VAQ LGAICG G VK FQ ++Y RYGGGANEL+DGY++
Sbjct:   46 AEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSK 172          

HSP 2 Score: 48.1358 bits (113), Expect = 3.390e-52
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 2
Query:  374 KGTGLGAEIIGTFVLVYTVFSATD 445
            KGTGL AEIIGTFVLVYTVFSATD
Sbjct:  172 KGTGLAAEIIGTFVLVYTVFSATD 195          
BLAST of FC920786 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.761e-52
Identity = 87/127 (68.50%), Postives = 98/127 (77.17%), Query Frame = 3
Query:    3 AEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLILALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYTR 377
            AEF+A            IGYK QTD   +     CGGVG+LGIAWAFGGMIFILVYCTAG+SGGHINPAVTFGLFL RKVSL+ ALLY+VAQCLGAICG G VK FQ ++Y RYGGGANEL+ GY++
Sbjct:   41 AEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSK 167          

HSP 2 Score: 48.1358 bits (113), Expect = 5.761e-52
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 2
Query:  374 KGTGLGAEIIGTFVLVYTVFSATD 445
            KGTGL AEIIGTFVLVYTVFSATD
Sbjct:  167 KGTGLAAEIIGTFVLVYTVFSATD 190          
BLAST of FC920786 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 3.684e-51
Identity = 88/126 (69.84%), Postives = 95/126 (75.40%), Query Frame = 3
Query:    3 AEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLILALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYT 374
            AEF+A            IGYK QTD  +N     CGGVG+LGIAWAFGGMIFILVYCTAG+SGGHINPAVT GLFL RKVSL+ ALLYM AQCLGAICG   VK FQ S Y+RYGGGANELA GY+
Sbjct:   43 AEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYS 168          

HSP 2 Score: 46.2098 bits (108), Expect = 3.684e-51
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 2
Query:  377 GTGLGAEIIGTFVLVYTVFSATD 445
            GTGL AEIIGTFVLVYTVFSATD
Sbjct:  170 GTGLAAEIIGTFVLVYTVFSATD 192          
BLAST of FC920786 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 4.802e-51
Identity = 86/123 (69.92%), Postives = 93/123 (75.61%), Query Frame = 3
Query:    3 AEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLILALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGY 371
            AEFIA            IG+KSQTD N     C  VG+LGI+WAFGGMIFILVYCTAGISGGHINPAVTFGLFL  KVSL+ A+ YMVAQCLGA CG G VK FQ +YYNRYGGGAN L+DGY
Sbjct:   42 AEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGY 164          

HSP 2 Score: 45.4394 bits (106), Expect = 4.802e-51
Identity = 21/23 (91.30%), Postives = 22/23 (95.65%), Query Frame = 2
Query:  377 GTGLGAEIIGTFVLVYTVFSATD 445
            G G+GAEIIGTFVLVYTVFSATD
Sbjct:  167 GVGVGAEIIGTFVLVYTVFSATD 189          
BLAST of FC920786 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.808e-50
Identity = 86/125 (68.80%), Postives = 95/125 (76.00%), Query Frame = 3
Query:    3 AEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLILALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYTR 377
            AEFIA            IG+K QT P      C GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+ AL YM+AQCLGAICG GFVKAF K+ YN  GGGAN +ADGY++
Sbjct:   42 AEFIATLLFLYVTVATVIGHKKQTGP------CDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSK 160          

HSP 2 Score: 48.1358 bits (113), Expect = 1.808e-50
Identity = 23/24 (95.83%), Postives = 23/24 (95.83%), Query Frame = 2
Query:  374 KGTGLGAEIIGTFVLVYTVFSATD 445
            KGT LGAEIIGTFVLVYTVFSATD
Sbjct:  160 KGTALGAEIIGTFVLVYTVFSATD 183          
BLAST of FC920786 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 7.382e-49
Identity = 85/126 (67.46%), Postives = 93/126 (73.81%), Query Frame = 3
Query:    3 AEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLILALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYT 374
            AEF+A            IGYK QTD + +     C GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+ ALLYM AQ LGAICG   VK FQ  +Y RYGGGANE++ GY+
Sbjct:   45 AEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYS 170          

HSP 2 Score: 46.2098 bits (108), Expect = 7.382e-49
Identity = 22/23 (95.65%), Postives = 22/23 (95.65%), Query Frame = 2
Query:  377 GTGLGAEIIGTFVLVYTVFSATD 445
            GTGL AEIIGTFVLVYTVFSATD
Sbjct:  172 GTGLAAEIIGTFVLVYTVFSATD 194          
BLAST of FC920786 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 1.255e-48
Identity = 82/125 (65.60%), Postives = 93/125 (74.40%), Query Frame = 3
Query:    3 AEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLILALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYTR 377
            AEFIA            IGYK +TDP      C  VG+LGIAW+FGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+ AL+YM+AQC GAICG G VKAF K  YN++GGGAN +A GY +
Sbjct:   44 AEFIATLLFLYITVATVIGYKKETDP------CASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNK 162          

HSP 2 Score: 46.2098 bits (108), Expect = 1.255e-48
Identity = 21/25 (84.00%), Postives = 23/25 (92.00%), Query Frame = 2
Query:  371 HKGTGLGAEIIGTFVLVYTVFSATD 445
            +KGT  GAE+IGTFVLVYTVFSATD
Sbjct:  161 NKGTAFGAELIGTFVLVYTVFSATD 185          
The following BLAST results are available for this feature:
BLAST of FC920786 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
PIP22_MAIZE2.392e-5369.77Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP21_ORYSJ2.392e-5370.87Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP25_ORYSJ2.393e-5369.29Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP23_ORYSJ3.390e-5268.50Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP25_MAIZE5.761e-5268.50Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP24_ORYSJ3.684e-5169.84Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP26_ARATH4.802e-5169.92Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP27_ARATH1.808e-5068.80Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP26_MAIZE7.382e-4967.46Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP1_ATRCA1.255e-4865.60Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32013A07EF RVDevelop1 Citrus clementina cDNA clone C32013A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920786 ID=FC920786; Name=FC920786; organism=Citrus clementina; type=EST; length=446bp
TTGCTGAGTTCATCGCTACGCTTTTGTTTCTTTATGTTACCGTCTTGACT
GTGATTGGATACAAGAGCCAGACTGATCCCAACTTGAATACCGATCAGTG
TGGTGGCGTTGGCATTCTTGGCATCGCTTGGGCCTTTGGTGGCATGATCT
TCATTCTCGTTTACTGCACAGCCGGTATTTCTGGTGGACATATCAACCCG
GCTGTGACATTCGGACTGTTCTTGGGGCGCAAGGTGTCGCTCATCCTAGC
TCTTTTGTACATGGTAGCACAGTGCTTGGGTGCAATCTGTGGTTGTGGGT
TTGTGAAGGCTTTCCAAAAATCATACTACAACAGGTATGGAGGTGGGGCC
AATGAGCTAGCTGATGGATACACAAGGGCACCGGACTGGGTGCTGAGATC
ATCGGTACTTTCGTTCTTGTCTACACTGTTTTCTCTGCCACTGATC
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