FC920791

Overview
NameFC920791
Unique NameFC920791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14197 contig Ccv1_Contig14197:1..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: GANAB_PIG (Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANAB PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.618e-39
Identity = 87/210 (41.43%), Postives = 123/210 (58.57%), Query Frame = 3
Query:   21 DGHSIYGFSQSIATHKALLGLEG--KRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWES-VAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGS--WYNV 635
            D H+IYGF   +AT   L+   G  +RPF+LSR+ F GS  + A WTGDN   W+ LK SI   L+ G+ GV   G+D+ GF+  P  EL  RW ++GA+ PF R HA+  + R+E +   +   +  R+ALG RY LLPF YTL Y+AH  G P+ R L+  +P  V  +++  +FLLG +L+V PV +     V+   P     WY+V
Sbjct:  570 DLHNIYGFYVHMATADGLVLRSGGVERPFVLSRAFFAGSQRFGAVWTGDNTAEWDHLKISIPMCLSLGLVGVSFCGADVGGFFKNPEPELLVRWYQMGAYQPFFRAHAHLDTGRREPWLLPTQYQDMIRDALGQRYSLLPFWYTLFYQAHREGVPVMRALWVHYPQDVTTFSIDDEFLLGDALLVHPVTDSEAHGVQVYLPGQGEVWYDV 779          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: GANAB_MACFA (Neutral alpha-glucosidase AB OS=Macaca fascicularis GN=GANAB PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.708e-39
Identity = 86/210 (40.95%), Postives = 122/210 (58.10%), Query Frame = 3
Query:   21 DGHSIYGFSQSIATHKALLGLEG--KRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESV-AESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGS--WYNV 635
            D H+IYG    +AT   L    G  +RPF+L+R+ F GS  + A WTGDN   W+ LK SI   L+ G+ G+   G+D+ GF+  P  EL  RW ++GA+ PF R HA+  + R+  +   S   +  R+ALG RY LLPF YTL Y+AH  G PI RPL+  +P  V  +++  Q+LLG +L+V PV + G   V+   P     WY++
Sbjct:  570 DVHNIYGLYVHMATADGLRQRSGGMERPFVLARAFFAGSQRFGAVWTGDNTAEWDHLKISIPMCLSLGLVGLSFCGADVGGFFKNPEPELLVRWYQMGAYQPFFRAHAHLDTGRRGPWLLPSQHNDIIRDALGQRYSLLPFWYTLFYQAHREGIPIMRPLWVQYPQDVTTFSIDDQYLLGDALLVHPVSDSGAHGVQVYLPGQGEVWYDI 779          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: GANAB_MOUSE (Neutral alpha-glucosidase AB OS=Mus musculus GN=Ganab PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.030e-39
Identity = 84/210 (40.00%), Postives = 123/210 (58.57%), Query Frame = 3
Query:   21 DGHSIYGFSQSIATHKALLGLEG--KRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESA-RNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGS--WYNV 635
            D H+IYG    +AT   L+   G  +RPF+LSR+ F GS  + A WTGDN   W+ LK SI   L+  + G+   G+D+ GF+  P  EL  RW ++GA+ PF R HA+  + R+E +   S  + A R+AL  RY LLPF YTL Y+AH  G P+ RPL+  +P  +  +++  QF+LG +L++ PV + G   V+   P     WY++
Sbjct:  570 DIHNIYGLYVHMATADGLIQRSGGIERPFVLSRAFFSGSQRFGAVWTGDNTAEWDHLKISIPMCLSLALVGLSFCGADVGGFFKNPEPELLVRWYQMGAYQPFFRAHAHLDTGRREPWLLASQYQDAIRDALFQRYSLLPFWYTLFYQAHKEGFPVMRPLWVQYPEDMSTFSIEDQFMLGDALLIHPVSDAGAHGVQVYLPGQEEVWYDI 779          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: GANC_HUMAN (Neutral alpha-glucosidase C OS=Homo sapiens GN=GANC PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 3.052e-38
Identity = 87/208 (41.83%), Postives = 125/208 (60.10%), Query Frame = 3
Query:   27 HSIYGFSQSIATHKALLGL-EGK-RPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQW-ESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGS---WYN 632
            H+IYGF   +AT + L+   +GK RPF+L+RS F GS  Y A WTGDN   W +LK SI  +L   I G+   G+DI GF   P  EL  RW + GA+ PF R HA   + R+E + + E      R A+  RY LLP+ Y+L Y AH++  P+ RPL+  FP+ ++ +++  +++LGS+L+V PV E  K+    +F PGS   WY+
Sbjct:  541 HNIYGFYHQMATAEGLIKRSKGKERPFVLTRSFFAGSQKYGAVWTGDNTAEWSNLKISIPMLLTLSITGISFCGADIGGFIGNPETELLVRWYQAGAYQPFFRGHATMNTKRREPWLFGEEHTRLIREAIRERYGLLPYWYSLFYHAHVASQPVMRPLWVEFPDELKTFDMEDEYMLGSALLVHPVTEP-KATTVDVFLPGSNEVWYD 747          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: GANC_MACFA (Neutral alpha-glucosidase C (Fragment) OS=Macaca fascicularis GN=GANC PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 5.205e-38
Identity = 85/208 (40.87%), Postives = 123/208 (59.13%), Query Frame = 3
Query:   27 HSIYGFSQSIATHKALLGLEG--KRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQW-ESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGS---WYN 632
            H+IYGF   +AT + L+   G  +RPF+L+RS F GS  Y A WTGDN   W  LK SI  +L   I G+   G+DI GF   P  EL  RW + GA+ PF R HA   + R+E + + +      R A+  RY LLP+ Y+L Y AH++  P+ RPL+  FP+ ++ +++  +++LGS+L+V PV E  K+    +F PGS   WY+
Sbjct:  396 HNIYGFYHQMATAEGLIQRSGGKERPFVLTRSFFAGSQKYGAVWTGDNTAEWSYLKISIPMLLTLSITGISFCGADIGGFIGNPETELLVRWYQAGAYQPFFRGHATMNAKRREPWLFGKEHTRLIREAIRERYGLLPYWYSLFYHAHVASQPVMRPLWVEFPDELKTFDMEDEYMLGSALLVHPVTEP-KATTVDVFLPGSNEVWYD 602          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: GANAB_DICDI (Neutral alpha-glucosidase AB OS=Dictyostelium discoideum GN=modA PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.418e-35
Identity = 85/240 (35.42%), Postives = 128/240 (53.33%), Query Frame = 3
Query:   21 DGHSIYGFSQSIATHKALLGL---EGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQW-ESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGS----WYNVFDMTQAISSKDGKFVTLDAPLHVXNVH 716
            D H++YG+   +A+   L+     +  RPF+LSR+ + GS    A WTGDN   W  L+ S   +L+  + G+   G+D+ GF+  P  EL  RW + GAF PF R HA+  S R+E + + E      R A+  RY  LP  YT  Y+  L+GAP+ RPL+  +P     ++V   +L+G SL+V PV +Q    +K L P  S    WY+V D  + I++     + +D PL    V+
Sbjct:  568 DVHNLYGYYYHMASADGLVQRNADQNDRPFVLSRAFYAGSQRIGAIWTGDNSAQWSHLEISNPMLLSMNLAGITFSGADVGGFFGNPDAELLTRWYQAGAFQPFFRGHAHLDSRRREPWLFNEPYTTIIREAIVKRYSYLPLWYTTFYQNTLNGAPVMRPLWVQYPKEANLFDVDDHYLIGDSLLVKPVTQQSCKTMKVLLPGQSVNEIWYDV-DTEKPINA---GVIEIDTPLEKIPVY 803          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: GLU2A_SCHPO (Glucosidase 2 subunit alpha OS=Schizosaccharomyces pombe GN=gls2 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.118e-31
Identity = 79/189 (41.80%), Postives = 103/189 (54.50%), Query Frame = 3
Query:   21 DGHSIYGFSQSIATHKALL--GLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQW-ESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLG-SSLMVSPV 575
            D H+IYG      T+  L+  G    RPFIL+RS F G+   AA+W GD   TWE L+ SI T+L  GI G+   G+D+ GF+  P  EL  RW E   FYPF R HA+  + R+E + + E      R  L +RY+LLP  YT  Y +H  G PI  P F   P   E + +  QF +G S L+V PV
Sbjct:  552 DIHNIYGHKCINGTYNGLIKRGEGAVRPFILTRSFFAGTSALAANWIGDTMTTWEHLRGSIPTVLTNGISGMAFSGADVAGFFGNPDAELFVRWYETAIFYPFFRAHAHIDTKRREPWLYGEPYTSLVRELLRIRYRLLPTWYTAFYNSHTHGFPILYPQFLMHPEDEEGFAIDDQFYVGDSGLLVKPV 740          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: AGLU_SULSO (Alpha-glucosidase OS=Sulfolobus solfataricus GN=malA PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.285e-28
Identity = 72/230 (31.30%), Postives = 121/230 (52.61%), Query Frame = 3
Query:   36 YGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCN------RWIEVGAFYPFSRDH-ANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHV 704
            Y   +++AT K          FILSR+ + G   YA  WTGDN  +W+DLK  +  +L   I GVP VG DI GF      E+ N      ++  +  F+PF R H A      + ++  +   E  +  + +RYK LP++Y+L  EA   G P+ RPLF+ F +  + Y +  ++++G  L+ +P++ + +S++  L P G WYN ++  + I+ K     T + P+++
Sbjct:  375 YPLYEAMATFKGFRTSHRNEIFILSRAGYAGIQRYAFIWTGDNTPSWDDLKLQLQLVLGLSISGVPFVGCDIGGFQGRNFAEIDNSMDLLVKYYALALFFPFYRSHKATDGIDTEPVFLPDYYKEKVKEIVELRYKFLPYIYSLALEASEKGHPVIRPLFYEFQDDDDMYRIEDEYMVGKYLLYAPIVSKEESRLVTL-PRGKWYNYWN-GEIINGKSVVKSTHELPIYL 602          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: AGLU_SULS9 (Alpha-glucosidase OS=Sulfolobus solfataricus (strain 98/2) GN=malA PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.285e-28
Identity = 72/230 (31.30%), Postives = 121/230 (52.61%), Query Frame = 3
Query:   36 YGFSQSIATHKALLGLEGKRPFILSRSTFVGSGHYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCN------RWIEVGAFYPFSRDH-ANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGSWYNVFDMTQAISSKDGKFVTLDAPLHV 704
            Y   +++AT K          FILSR+ + G   YA  WTGDN  +W+DLK  +  +L   I GVP VG DI GF      E+ N      ++  +  F+PF R H A      + ++  +   E  +  + +RYK LP++Y+L  EA   G P+ RPLF+ F +  + Y +  ++++G  L+ +P++ + +S++  L P G WYN ++  + I+ K     T + P+++
Sbjct:  375 YPLYEAMATFKGFRTSHRNEIFILSRAGYAGIQRYAFIWTGDNTPSWDDLKLQLQLVLGLSISGVPFVGCDIGGFQGRNFAEIDNSMDLLVKYYALALFFPFYRSHKATDGIDTEPVFLPDYYKEKVKEIVELRYKFLPYIYSLALEASEKGHPVIRPLFYEFQDDDDMYRIEDEYMVGKYLLYAPIVSKEESRLVTL-PRGKWYNYWN-GEIINGKSVVKSTHELPIYL 602          
BLAST of FC920791 vs. ExPASy Swiss-Prot
Match: XYLS_SULSO (Alpha-xylosidase OS=Sulfolobus solfataricus GN=xylS PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.424e-19
Identity = 62/212 (29.25%), Postives = 97/212 (45.75%), Query Frame = 3
Query:   18 YDGHSIYGFSQSIATHKALLGLEGKRPFILSRSTFVGSG-HYAAHWTGDNKGTWEDLKYSISTMLNFGIFGVPMVGSDICGFYPAPTE-----ELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPFLYTLNYEAHLSGAPIARPLFFSFPNYVECYNVSTQFLLGSSLMVSPVLEQGKSQVKALFPPGS-WYN 632
            Y+  + Y   ++ A ++    +  KR  IL+RS F G   H A  W+GD  G W  L+  I   LNF I G+P   +D  GF+    E     E+  RW +   F P  R H   + P++         E     + +RYKLLP++Y+L +  +  G  I RPL   F +    Y+   Q++ G  +++SPV      + +   P    WY+
Sbjct:  380 YEYLNAYPLMETKAVYEGQRRISNKRVVILTRSAFAGQQRHSAISWSGDVLGDWATLRAQIPAGLNFSISGIPYWTTDTGGFFSGNPETKAYAEIFVRWFQWSTFCPILRVHGTIF-PKEPWRFPREYQEVILKYIRLRYKLLPYIYSLAWMTYSIGYTIMRPLVMDFRDDQNVYDFDEQYMFGPYILISPVTLPSIIEKEVYLPSKEYWYD 590          
The following BLAST results are available for this feature:
BLAST of FC920791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
GANAB_PIG1.618e-3941.43Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANA... [more]
GANAB_MACFA4.708e-3940.95Neutral alpha-glucosidase AB OS=Macaca fasciculari... [more]
GANAB_MOUSE8.030e-3940.00Neutral alpha-glucosidase AB OS=Mus musculus GN=Ga... [more]
GANC_HUMAN3.052e-3841.83Neutral alpha-glucosidase C OS=Homo sapiens GN=GAN... [more]
GANC_MACFA5.205e-3840.87Neutral alpha-glucosidase C (Fragment) OS=Macaca f... [more]
GANAB_DICDI2.418e-3535.42Neutral alpha-glucosidase AB OS=Dictyostelium disc... [more]
GLU2A_SCHPO2.118e-3141.80Glucosidase 2 subunit alpha OS=Schizosaccharomyces... [more]
AGLU_SULSO1.285e-2831.30Alpha-glucosidase OS=Sulfolobus solfataricus GN=ma... [more]
AGLU_SULS91.285e-2831.30Alpha-glucosidase OS=Sulfolobus solfataricus (stra... [more]
XYLS_SULSO1.424e-1929.25Alpha-xylosidase OS=Sulfolobus solfataricus GN=xyl... [more]

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Properties
Property NameValue
Genbank descriptionC32013A12EF RVDevelop1 Citrus clementina cDNA clone C32013A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920791 ID=FC920791; Name=FC920791; organism=Citrus clementina; type=EST; length=740bp
ACAATGGTGTTCTCGAATATGATGGTCACAGTATTTATGGATTCTCTCAA
TCCATTGCAACTCACAAGGCTCTCCTAGGGCTTGAAGGCAAGAGGCCATT
CATATTATCACGCTCTACTTTTGTTGGTTCTGGTCATTATGCTGCACACT
GGACGGGTGATAATAAGGGAACATGGGAAGATCTAAAGTATTCTATTTCA
ACCATGCTGAACTTCGGCATATTTGGGGTTCCAATGGTTGGTTCCGATAT
ATGTGGGTTCTATCCTGCCCCAACAGAAGAGCTTTGTAACCGATGGATAG
AAGTAGGTGCATTCTATCCGTTCTCAAGGGATCATGCAAACTACTACTCC
CCAAGACAGGAGCTTTATCAGTGGGAGTCAGTAGCAGAGTCCGCCCGAAA
TGCTCTGGGTATGAGGTATAAACTACTTCCTTTCCTGTACACGTTGAACT
ATGAAGCCCATTTAAGTGGAGCTCCAATAGCCAGGCCACTTTTCTTCTCA
TTCCCAAATTATGTCGAGTGTTACAATGTGAGCACCCAGTTCTTGCTGGG
GAGCAGCCTGATGGTTTCTCCAGTGCTTGAGCAGGGGAAGTCACAGGTTA
AAGCACTCTTTCCTCCAGGTAGTTGGTACAATGTGTTTGATATGACACAA
GCCATTTCATCGAAAGATGGGAAATTTGTTACGCTTGATGCACCTTTACA
TGTGGNTAACGTGCACTTGCACAGAATACATCCTTCCATG
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