FC920794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920794 vs. ExPASy Swiss-Prot
Match: PTGR1_RABIT (Prostaglandin reductase 1 OS=Oryctolagus cuniculus GN=PTGR1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.519e-25 Identity = 72/190 (37.89%), Postives = 104/190 (54.74%), Query Frame = 1 Query: 58 VVSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQ--GLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV 621 +V K LK + G P ++D +K + + +L++ L+LS DPYMR ++ G + G VA+VV+S +P + G LV +GW +S+ Q L +PLS G +GMPG+TA+ G EIC K G+ + V+AA+GAVG +VGQ AK+ GC VVG+AGS EKV Sbjct: 1 MVRAKNWTLKKHFHGHPTDSDFELKTVELP---PLNNGEVLLEALFLSVDPYMRLGSKRLKE--------GDTMMGQQVARVVESKNPAWPVGTLVLAHSGWASHSISDGQQLEKLLTEWPDTLPLSLALGTVGMPGITAYFGLLEICGAKSGDTVLVNAAAGAVGAVVGQIAKIKGCRVVGAAGSEEKV 179
BLAST of FC920794 vs. ExPASy Swiss-Prot
Match: PTGR1_PIG (Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.743e-24 Identity = 71/190 (37.37%), Postives = 104/190 (54.74%), Query Frame = 1 Query: 58 VVSNKQVILKNYVEGFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLI--KNPQGLFKIHHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKGEYIYVSAASGAVGQLVGQFAKLMGCYVVGSAGSREKV 621 +V K LK + G+P ++ +K + ++ G +L++ L+L+ DPYMR G + G VA+V++S + F G +V GW +S+ KN + L +PLS G +GMPG+TA+ G +IC K GE + V+AA+GAVG +VGQ AKL GC VVG+AGS EKV Sbjct: 1 MVRAKSWTLKKHFVGYPTPSNFELKTVELP-PLKNGE--VLLEALFLTVDPYMRIAAR--------KLKEGDMMMGEQVARVIESKNAAFPTGTIVVALLGWTTHSISDGKNLERLLAEWPDTLPLSLTLGTVGMPGLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKV 179
BLAST of FC920794 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 65/181 (35.91%), Postives = 90/181 (49.72%), Query Frame = 1 Query: 100 GFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYE--ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREK 618 G P + V+ ++ V EG + V+ LYLS DPYMR RM N+D TP ++G GV + +S H F KGD V + +I + L K+ D LSY+ G +GMPG+T+ G E + + VS A+GA G L GQ +L+GC VVG G+ EK Sbjct: 16 GHPVAENFRVEEVNLPDCVNEGQ--VQVRTLYLSVDPYMRCRM--NEDTGSDYITPWQLSQVVDGGGVGIIEESKHTNFMKGDFVTSFYWPWQTKVILDGNILEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEK 192
BLAST of FC920794 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16 Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 1 Query: 100 GFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDF-SSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYE--ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREK 618 G P + V+ S+ + EG + V+ LYLS DPYMR +M+ + D+ + + +G G+ V +S H + KGD V + I + GL K+ D LSY+ G +GMPG+T+ G E + + + VS A+GA G L GQ L+GC VVG G++EK Sbjct: 16 GNPVAENFRVEEFSLPDALNEGQ--VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEK 192
BLAST of FC920794 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 61/179 (34.08%), Postives = 89/179 (49.72%), Query Frame = 1 Query: 100 GFPKETDMLVKASSISLKVEEGSNAILVKNLYLSCDPYMRARMSFNQDPDF-SSFTPGSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYEICAPKKG--EYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREK 618 G P + V+ S+ + EG + V+ LYLS DPYMR +M+ D+ + + +G G+ + +S H + KGD V + I + GL K+ D LSY+ G +GMPG+T+ G E G + + VS A+GA G L GQ L+GC VVG G+ EK Sbjct: 16 GNPVAENFRVEEVSLPDTINEGQ--VRVRTLYLSVDPYMRCKMNEETGADYLAPWQLAQVADGGGLGVIEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEK 192
BLAST of FC920794 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15 Identity = 59/167 (35.33%), Postives = 83/167 (49.70%), Query Frame = 1 Query: 154 VEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYE--ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLI 630 + EG + V+ LYLS DPYMR RM N+D TP ++G G+ + +S H KGD V + +I + L K+ D LSY+ G +GMPG+T+ G E + + VS A+GA G + GQ L+GC VVG G+ EK L+ Sbjct: 34 INEGQ--VQVRTLYLSVDPYMRCRM--NEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLL 196
BLAST of FC920794 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 58/167 (34.73%), Postives = 82/167 (49.10%), Query Frame = 1 Query: 154 VEEGSNAILVKNLYLSCDPYMRARMSFNQDPDFSSFTP---GSPIEGFGVAKVVDSGHPEFKKGDLVWGTTGWEEYSLIKNPQGLFKI--HHTDVPLSYYTGILGMPGMTAWAGFYE--ICAPKKGEYIYVSAASGAVGQLVGQFAKLMGC-YVVGSAGSREKVWLI 630 + EG + V+ LYLS DPYMR RM N+D TP ++G G+ + +S H KGD V + +I + L K+ D LSY+ G +GMPG+T+ G E + + VS A+GA G + GQ +GC VVG G+ EK L+ Sbjct: 34 INEGQ--VQVRTLYLSVDPYMRCRM--NEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILL 196 The following BLAST results are available for this feature:
BLAST of FC920794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920794 ID=FC920794; Name=FC920794; organism=Citrus clementina; type=EST; length=686bpback to top |