FC920795

Overview
NameFC920795
Unique NameFC920795
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14200 contig Ccv1_Contig14200:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS2_SOLTU (Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.262e-35
Identity = 79/188 (42.02%), Postives = 115/188 (61.17%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATI+A+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +  RY+ +++EILK+ P +     P++  R DI    V ++  EA+Q  IK WG+P + ITHVV+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + +R+AKD+AENN G+RVL+  SE T + F  PS
Sbjct:   15 GPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMINKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVIRLAKDLAENNKGARVLVVCSEITAVTFSGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSY_VITVI (Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.648e-35
Identity = 78/188 (41.49%), Postives = 116/188 (61.70%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT+LA+G A P   V Q    D YF+ TN +   ELK+K  R+C+ + +  RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH+V+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN GSRVL+  SE T + F+ PS
Sbjct:   15 GPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSB_PETHY (Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.648e-35
Identity = 80/200 (40.00%), Postives = 120/200 (60.00%), Query Frame = 1
Query:   76 GSLAGFANKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G L G+  + + G A ILA+G A P   V Q    D YF+ TN     +LK+K  R+C  T +K R++ +++E+L+K P L     P++  R DI    + ++  EA+   I  WG+P + ITH+V+ + S   +PG D  L + LGLSP  QR+M+Y  GC  G + LR+AKD+AENN G+RVL+  +E++ I F+ PS
Sbjct:    6 GQLQGWWAQRAEGPAKILAIGTATPFHWVDQNSYPDYYFRVTNSQHLVDLKEKFRRICSKTMIKKRHMFLTEELLRKNPTLCSHNEPSLDIRQDILVSEIPKLGKEAALKAIGEWGQPKSTITHLVFCTRSGVDMPGADCQLVKLLGLSPSVQRLMMYQQGCFAGGTMLRLAKDLAENNKGARVLVVCAESSAIGFRGPS 205          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.648e-35
Identity = 76/188 (40.43%), Postives = 116/188 (61.70%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT+LA+G A P   V Q    D YF+ TN +D PELK+K  R+C+ + + TRY+ +++++LK+ P        ++  R DI    V ++  EA+   IK WG+P + ITH+++ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN  +RVL+  SE T+I F+ P+
Sbjct:   15 GPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYMHLTEDLLKQNPSFCEYMASSLDARQDIVVNEVPKLGKEAALRAIKEWGQPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITVITFRGPN 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.648e-35
Identity = 76/188 (40.43%), Postives = 117/188 (62.23%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT+LA+G A P   + Q    D YF+ TN +   ELK+K  R+C  + +K RY+ +++EILK++P +     P++  R D+    + ++  EA+   IK WG+P + ITH+V+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATVLAIGTATPPNCLDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMYLTEEILKEHPNMCAYMAPSLDARQDMVVVEIPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.152e-35
Identity = 78/188 (41.49%), Postives = 115/188 (61.17%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G ATILA+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH+++ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATILAIGTANPPNCVDQSTYPDYYFRITNSEHMTELKEKFQRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.152e-35
Identity = 76/188 (40.43%), Postives = 116/188 (61.70%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT++A+G A P   V Q    D YF+ TN +   +LK+K  R+C+ + ++ RY+ +++E LK+ P +     P++  R DI    V ++  EA+Q  IK WG+P + ITH+V+ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATVMAIGTATPENCVDQSTYPDYYFRITNSEHRTDLKEKFKRMCEKSMIRKRYMHLTEEFLKENPNMTAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRMAKDLAENNAGARVLVVCSEITAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.152e-35
Identity = 77/188 (40.96%), Postives = 116/188 (61.70%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT++A+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R D+    V ++  EA+   IK WG+P + ITH+V+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMYLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.152e-35
Identity = 77/188 (40.96%), Postives = 117/188 (62.23%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT++A+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +K RY+ +++EILK+ P++     P++  R D+    V ++  EA+   IK WG+P + ITH+V+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKAELKEKFKRMCDKSMIKKRYMYLTEEILKENPQVCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.811e-35
Identity = 76/188 (40.43%), Postives = 116/188 (61.70%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT++A+G A P   V Q    D YF+ TN +   ELK+K  R+C  + +K RY+ +++E+LK+ P +     P++  R DI    V ++  EA+   IK WG+P + ITH+V+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ P+
Sbjct:   15 GPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYMYLNEEVLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPT 202          
The following BLAST results are available for this feature:
BLAST of FC920795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHS2_SOLTU1.262e-3542.02Chalcone synthase 2 OS=Solanum tuberosum GN=CHS2 P... [more]
CHSY_VITVI1.648e-3541.49Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV... [more]
CHSB_PETHY1.648e-3540.00Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=... [more]
CHS1_DAUCA1.648e-3540.43Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 ... [more]
CHS1_CASGL1.648e-3540.43Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]
CHSY_PUELO2.152e-3541.49Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHSY_PERFR2.152e-3540.43Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHS2_CAMSI2.152e-3540.96Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHS1_CAMSI2.152e-3540.96Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSY_HYPAN2.811e-3540.43Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC32013B05EF RVDevelop1 Citrus clementina cDNA clone C32013B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920795 ID=FC920795; Name=FC920795; organism=Citrus clementina; type=EST; length=691bp
GACTGTGGATTCAGGCAGTTTTCCCACACCTCCTGAAAGTTTCATCAACG
TTTCTTTTGATAGAGAAGAAGCATGGGCAGCTTAGCAGGTTTCGCAAATA
AGGCAAGCCCTGGCAAAGCTACCATTCTGGCTCTTGGCAAGGCTTTCCCT
CACCAACTTGTCATGCAGGAATTTCTGGTTGATGGGTACTTCAAGAACAC
CAACTGTGATGATCCCGAGCTCAAGCAGAAGCTAACCCGACTCTGCAAGA
CAACAACGGTTAAAACAAGATATGTAGTCATGTCAGACGAGATCCTGAAG
AAATATCCTGAGCTTGCCATAGAAGGCCTTCCTACTGTGAAGCAAAGGCT
TGATATCTGCAACAAAGCTGTCACCCAAATGGCCATTGAAGCTTCACAAG
CTTGCATCAAGAGCTGGGGCAGGCCAATAACAGACATAACCCACGTAGTT
TATGTCTCCTCAAGTGAAGCTCGGCTGCCTGGGGGTGATCTCTACTTGGC
AAGAGGCCTTGGACTCAGTCCTGAGACTCAGCGTGTCATGCTCTACTTCA
TGGGCTGCTCTGGTGGAGTTTCTGGCCTGCGTGTGGCGAAGGACATTGCT
GAAAACAATCCTGGAAGCAGAGTTCTGCTAGCTACTTCCGAAACTACAAT
TATTGAGTTCAAGCCACCAAGTGCAGAAAGGCCATATGACT
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