FC920795

Overview
NameFC920795
Unique NameFC920795
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14200 contig Ccv1_Contig14200:1..691. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSA_PEA (Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.395e-34
Identity = 77/188 (40.96%), Postives = 113/188 (60.11%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G AT+ A+G A P   V Q    D YF+ TN     ELK+K  R+C  + +K RY+ +++EILK+ P L     P++  R D+    V ++  EA+   IK WG+P + ITH+++ ++S   +PG D  L + LGL P  +R M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 GPATVFAIGTATPQNCVEQSTYPDFYFRITNSQHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPSLCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPS 202          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: DPS2_PINST (Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.379e-34
Identity = 78/194 (40.21%), Postives = 125/194 (64.43%), Query Frame = 1
Query:   97 NKASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPEL-AIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            ++ + G A+ILA+G A P  +V Q    D YF+NTN +D  +LK K  R+C+ + +K R++ +++EILKK PEL A   +P++  R  +    V ++  EA++  I+ WG+P + ITH+++ +++   LPG D  +A+ LGL P  +RV ++  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   15 SQRADGFASILAIGTANPPNVVDQSTYPDYYFRNTNNEDNTDLKDKFKRICERSAIKKRHMYLTEEILKKNPELCAFLEVPSLDTRQAMLAVEVPRLGKEAAEKAIEEWGQPKSRITHLIFCTTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRLAKDLAENNRGARVLVVCSENTAVTFRGPS 208          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.379e-34
Identity = 77/191 (40.31%), Postives = 117/191 (61.26%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPSAER 681
            G A ILA+G A P   V Q    D YF+ TN     E K+K  R+C  + ++ R++V+++E+L+K P L      ++  R DI    V ++  EA+   IK WGRPI++ITH+V+ ++S   +PG D  L + LGL+   +R+M+Y  GC+ G + LR+AKD+AE+N G R+L+  SE TI  F+ PS E+
Sbjct:   23 GYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLQKNPSLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFRLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNKGGRILVVCSEITINIFRGPSLEQ 213          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPU (Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE=3 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.379e-34
Identity = 77/195 (39.49%), Postives = 117/195 (60.00%), Query Frame = 1
Query:  100 KASPGKATILALGKAFPHQLVMQEFLVDGYFKNTNCDDP-ELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPSAER 681
            K   G A ILA+G A P   V Q    D YF+ TN +   E K+K  R+C  + +  R++V+++E+LKK P L      ++  R DI    V ++  +A+   IK WGRPI++ITH+V+ ++S   +PG D  L + LGL+   +R+M+Y  GC+ G + LR+AKD+AENN G RVL+  SE  +  F+ PS ++
Sbjct:   17 KRLEGDAKILAIGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIMKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKDAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAENNKGGRVLVVCSEVMLSVFRGPSLQQ 211          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.379e-34
Identity = 77/188 (40.96%), Postives = 112/188 (59.57%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G A +LA+G + P   + Q    D YF+ T  +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R DI    V ++A EA+   IK WG P + ITH+++ ++S   +PG D  L R LGL P   R MLY  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   16 GPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAARAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPS 203          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS1_HORVU (Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.379e-34
Identity = 76/187 (40.64%), Postives = 114/187 (60.96%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPP 669
            G AT+LA+G A P   V Q    D YFK T  D   +LK+K  R+C  + ++ RY+ +++EIL++ P +     P++  R DI    V ++   A+Q  IK WG+P + ITH+V+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ P
Sbjct:   18 GPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILEENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGP 204          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: TBSYN_HYPAN (Trihydroxybenzophenone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.108e-34
Identity = 75/187 (40.11%), Postives = 115/187 (61.50%), Query Frame = 1
Query:  115 KATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            +A++LA+G   P   ++QE   D YF+NTN +   ELK+K  R+C  + ++ R+  +++EILK+   +A  G  ++  R  I    V ++  EA+   I  WG+PI+ ITHVV+ ++S   +PG D  + R LGL+   +RVMLY  GC  G + LRVAKD+AENN G+RVL+  +E T + F  P+
Sbjct:   19 RASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRHFYLTEEILKENQGIATYGAGSLDARQRILETEVPKLGQEAALKAIAEWGQPISKITHVVFATTSGFMMPGADYVITRLLGLNRTVRRVMLYNQGCFAGGTALRVAKDLAENNEGARVLVVCAENTAMTFHAPN 205          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHSY_RAPSA (Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.108e-34
Identity = 77/188 (40.96%), Postives = 116/188 (61.70%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G A ILA+G A P   V+Q    D YF+ TN +   +LK+K  R+C  +T++ R++ +++E LK+ P +     P++  R DI    V ++  EA+   IK WG+P + ITHVV+ ++S   +PG D  L + LGL P  +R+M+Y  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   19 GPAGILAIGTANPANHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPS 206          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.108e-34
Identity = 77/188 (40.96%), Postives = 112/188 (59.57%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G A +LA+G + P   + Q    D YF+ T  +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R DI    V ++A EA+   IK WG P + ITH+++ ++S   +PG D  L R LGL P   R MLY  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   16 GPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPS 203          
BLAST of FC920795 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.108e-34
Identity = 77/188 (40.96%), Postives = 112/188 (59.57%), Query Frame = 1
Query:  112 GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSDEILKKYPELAIEGLPTVKQRLDICNKAVTQMAIEASQACIKSWGRPITDITHVVYVSSSEARLPGGDLYLARGLGLSPETQRVMLYFMGCSGGVSGLRVAKDIAENNPGSRVLLATSETTIIEFKPPS 672
            G A +LA+G + P   + Q    D YF+ T  +   ELK+K  R+C  + +K RY+ +++EILK+ P +     P++  R DI    V ++A EA+   IK WG P + ITH+++ ++S   +PG D  L R LGL P   R MLY  GC  G + LR+AKD+AENN G+RVL+  SE T + F+ PS
Sbjct:   16 GPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPS 203          
The following BLAST results are available for this feature:
BLAST of FC920795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHSA_PEA1.395e-3440.96Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE... [more]
DPS2_PINST2.379e-3440.21Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=... [more]
CHSB_IPOTR2.379e-3440.31Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHSA_IPOPU2.379e-3439.49Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE... [more]
CHS8_BROFI2.379e-3440.96Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS1_HORVU2.379e-3440.64Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=... [more]
TBSYN_HYPAN3.108e-3440.11Trihydroxybenzophenone synthase OS=Hypericum andro... [more]
CHSY_RAPSA3.108e-3440.96Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 ... [more]
CHS4_BROFI3.108e-3440.96Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]
CHS3_BROFI3.108e-3440.96Chalcone synthase 3 OS=Bromheadia finlaysoniana GN... [more]

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Properties
Property NameValue
Genbank descriptionC32013B05EF RVDevelop1 Citrus clementina cDNA clone C32013B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920795 ID=FC920795; Name=FC920795; organism=Citrus clementina; type=EST; length=691bp
GACTGTGGATTCAGGCAGTTTTCCCACACCTCCTGAAAGTTTCATCAACG
TTTCTTTTGATAGAGAAGAAGCATGGGCAGCTTAGCAGGTTTCGCAAATA
AGGCAAGCCCTGGCAAAGCTACCATTCTGGCTCTTGGCAAGGCTTTCCCT
CACCAACTTGTCATGCAGGAATTTCTGGTTGATGGGTACTTCAAGAACAC
CAACTGTGATGATCCCGAGCTCAAGCAGAAGCTAACCCGACTCTGCAAGA
CAACAACGGTTAAAACAAGATATGTAGTCATGTCAGACGAGATCCTGAAG
AAATATCCTGAGCTTGCCATAGAAGGCCTTCCTACTGTGAAGCAAAGGCT
TGATATCTGCAACAAAGCTGTCACCCAAATGGCCATTGAAGCTTCACAAG
CTTGCATCAAGAGCTGGGGCAGGCCAATAACAGACATAACCCACGTAGTT
TATGTCTCCTCAAGTGAAGCTCGGCTGCCTGGGGGTGATCTCTACTTGGC
AAGAGGCCTTGGACTCAGTCCTGAGACTCAGCGTGTCATGCTCTACTTCA
TGGGCTGCTCTGGTGGAGTTTCTGGCCTGCGTGTGGCGAAGGACATTGCT
GAAAACAATCCTGGAAGCAGAGTTCTGCTAGCTACTTCCGAAACTACAAT
TATTGAGTTCAAGCCACCAAGTGCAGAAAGGCCATATGACT
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