FC920798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43 Identity = 81/136 (59.56%), Postives = 112/136 (82.35%), Query Frame = 3 Query: 288 DYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQ 695 ++VFKVVLIG+S VGK+ +L+RF R+EFS DS+ TIGVEF TRT+++ +VKAQIWDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+G +SDL + R VPTE+A+ A+ Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAE 145
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB25_BOVIN (Ras-related protein Rab-25 OS=Bos taurus GN=RAB25 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43 Identity = 80/136 (58.82%), Postives = 112/136 (82.35%), Query Frame = 3 Query: 288 DYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQ 695 ++VFKVVLIG+S VGK+ +L+RF R+EFS DS+ TIGVEF TRT+++ ++KAQIWDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+G +SDL + R VPTE+A+ A+ Sbjct: 10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAIKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQSREVPTEEARMFAE 145
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB25_MOUSE (Ras-related protein Rab-25 OS=Mus musculus GN=Rab25 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.120e-42 Identity = 81/140 (57.86%), Postives = 113/140 (80.71%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQ 695 ++ ++VFKVVLIG+S VGK+ +L+RF R+EFS DS+ TIGVEF TRT+++ +VKAQIWDTAG ERYRA+TSAYYRGAVGA+LV+D+++ Q++ + RWL+EL HA+ IV++L+G +SDL + R VPTE+A A+ Sbjct: 6 DEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEACMFAE 145
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.911e-42 Identity = 80/144 (55.56%), Postives = 115/144 (79.86%), Query Frame = 3 Query: 279 QKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKEDYS 710 ++ +Y+FK+V+IGDSAVGKS +L RF R+EF+ +KATIGV+F T+++ I +K++ AQ WDTAGQER+RAVTS YYRGAVGAM+VYDI+ + SF ++ RWL ELR A+++I+I+++G +SDLE R VPT++A+ A+ S Sbjct: 5 EEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKIS 148
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.814e-39 Identity = 76/150 (50.67%), Postives = 108/150 (72.00%), Query Frame = 3 Query: 255 GGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKED 704 G G GDP+++ D++FK+VL+GD++VGK+ ++ RF FS +TIGV+F +TL IQ K VK QIWDTAGQER+R +T +YYR A GA+L YDI++R SF +P W+E++R +A NIV +LIG +SDL E R V +A+ +A+ D Sbjct: 5 GPGPGDPDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYD 154
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB43_RAT (Ras-related protein Rab-43 OS=Rattus norvegicus GN=Rab43 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.186e-38 Identity = 75/151 (49.67%), Postives = 108/151 (71.52%), Query Frame = 3 Query: 252 SGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKED 704 +G G GD ++ D++FK+VL+GD++VGK+ ++ RF FS +TIGV+F +TL IQ K VK QIWDTAGQER+R +T +YYR A GA+L YDIS+R +F +P W+E++R +A NIV +LIG +SDL + R VP +A+ +A+ D Sbjct: 2 AGPGPGDQDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADLREVPLAEAQSLAEHYD 152
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.855e-38 Identity = 75/151 (49.67%), Postives = 108/151 (71.52%), Query Frame = 3 Query: 252 SGGGYGDPNQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKED 704 +G G GD ++ D++FK+VL+GD++VGK+ ++ RF FS +TIGV+F +TL IQ K VK QIWDTAGQER+R +T +YYR A GA+L YDIS+R +F +P W+E++R +A NIV +LIG +SDL + R VP +A+ +A+ D Sbjct: 2 AGPGPGDQDEHYDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFREVPLAEAQSLAEHYD 152
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.123e-37 Identity = 68/137 (49.64%), Postives = 108/137 (78.83%), Query Frame = 3 Query: 288 DYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 DY+ K+V+IGDS VGKS +L+R+ ++EFS+ +TIGVEF T+TL I +K +K Q+WDTAGQE+Y ++T +YY+GA+GA++VY+I+ R SF+++ +WL++ R +A ++ I+L+G +SDL+E R V T + K+ A+K Sbjct: 9 DYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEK 145
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 2.046e-36 Identity = 71/136 (52.21%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 291 YVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 Y+FK ++IGD VGKS +L +F +F D TIGVEF TR + + + +K QIWDTAGQER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIG ++DLE QR V E+AK+ A++ Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEE 145
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 152.525 bits (384), Expect = 2.046e-36 Identity = 71/136 (52.21%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 291 YVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 Y+FK ++IGD VGKS +L +F +F D TIGVEF TR + + + +K QIWDTAGQER+RAVT +YYRGA GA++VYDI+RR +++H+ WL + R+ + N VIILIG ++DLE QR V E+AK+ A++ Sbjct: 10 YIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEE 145 The following BLAST results are available for this feature:
BLAST of FC920798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920798 ID=FC920798; Name=FC920798; organism=Citrus clementina; type=EST; length=712bpback to top |