FC920798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.859e-35 Identity = 67/136 (49.26%), Postives = 100/136 (73.53%), Query Frame = 3 Query: 291 YVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 ++FK ++IGD+ VGKS +L +F F TIGVEF R + I +K++K QIWDTAGQE +R++T +YYRG+ GA+LVYDI+RR +F+H+ WL++ RS+A+ N+ IILIG +SD+E +RAV E+ ++ A + Sbjct: 4 FLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADE 139
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.040e-35 Identity = 67/136 (49.26%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 291 YVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I +K +K QIWDTAGQE +R++T +YYRGA GA+LVYDI+RR++F+H+ WLE+ R HA+ N+ I+L+G + DL +RAV E+ ++ A++ Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKE 140
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.583e-35 Identity = 68/140 (48.57%), Postives = 105/140 (75.00%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQ 695 N + DY+FK++LIGDS VGKS +L RFA ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++SF+++ +WL E+ +A +N+ +L+G +SDL +R V T+ AKE A+ Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAE 141
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.915e-34 Identity = 68/141 (48.23%), Postives = 101/141 (71.63%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 N + DY+FK++LIGDS VGKS +L RF+ + +TIGV+F+ RT+ K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ +SF+++ +WL E+ +A N+ +L+G +SDL E RA+P E AK A + Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADE 142
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB19_RAT (Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.915e-34 Identity = 67/141 (47.52%), Postives = 99/141 (70.21%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 ++ +DY+FKV+LIGDS VGK+ ++ F +S + TIGV+F R+L I K VK Q+WDTAGQER+R +T +YYR A A++ YD++RR +F+ +P W+ E+ + N+VI+LIG +SDL E+R V EDA +A+K Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEK 151
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB19_MOUSE (Ras-related protein Rab-19 OS=Mus musculus GN=Rab19 PE=2 SV=3) HSP 1 Score: 145.976 bits (367), Expect = 1.915e-34 Identity = 67/141 (47.52%), Postives = 99/141 (70.21%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 ++ +DY+FKV+LIGDS VGK+ ++ F +S + TIGV+F R+L I K VK Q+WDTAGQER+R +T +YYR A A++ YD++RR +F+ +P W+ E+ + N+VI+LIG +SDL E+R V EDA +A+K Sbjct: 11 DENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEK 151
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.502e-34 Identity = 66/143 (46.15%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 279 QKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPR-WLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKED 704 ++ DY+FK+++IGDS GKS +L RFA + +S +TIGV+F+ +T+ I + ++K QIWDTAGQER+R +TS YYRGA G + VYD++ + SFDHI WL+++ +A N+ +LIG + DL E R V ++AK +A++ + Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAESRVVSADEAKHVAEQNN 144
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.278e-34 Identity = 66/139 (47.48%), Postives = 102/139 (73.38%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIA 692 N + DY+FK++LIGDS VGKS +L RFA ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ R+S+ ++ +WL+E+ +A +N+ +L+G +SDL ++ V AKE A Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFA 140
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.506e-34 Identity = 64/137 (46.72%), Postives = 101/137 (73.72%), Query Frame = 3 Query: 288 DYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 D + K++LIGDS VGKS +L RF +F+ TIG++F+ RT+ I ++ VK Q+WDTAGQER+R +T+AYYRGA+G +LVYD++ +SF++I W + ++S+A++ + +IL+G + DL+E+R V TE + +A K Sbjct: 9 DLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADK 145
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.506e-34 Identity = 62/139 (44.60%), Postives = 101/139 (72.66%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIA 692 +Q DY+FK++LIG+S+VGK+ L R+A F+ +T+G++F+ +T+ K +K QIWDTAGQERYR +T+AYYRGA+G +L+YDI+ ++SF + W ++++++ N +IL+G + DLE++R VP ED + +A Sbjct: 16 DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLA 154 The following BLAST results are available for this feature:
BLAST of FC920798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920798 ID=FC920798; Name=FC920798; organism=Citrus clementina; type=EST; length=712bpback to top |