FC920798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB19_XENTR (Ras-related protein Rab-19 OS=Xenopus tropicalis GN=rab19 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.506e-34 Identity = 65/137 (47.45%), Postives = 98/137 (71.53%), Query Frame = 3 Query: 288 DYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 D++FK++LIGDS VGK+ ++ RF F+ + + TIGV+F R + I K VK Q+WDTAGQER+R +T +YYR A GA++ YDI+RRQSF+ +P W+ E + N++++LIG +SDL E+R + E+A +A+K Sbjct: 13 DFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQERFRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFEEACTLAEK 149
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.241e-33 Identity = 68/141 (48.23%), Postives = 104/141 (73.76%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 + + DY+FK++LIGDS+VGKS L RFA + +TIGV+F+ RT+ ++ K+VK QIWDTAGQER+R +TS+YYRGA G ++VYDI+ +SF+++ +WL+E+ +A+ ++ +L+G + DL E RAV T A+ AQ+ Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQE 142
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.241e-33 Identity = 64/137 (46.72%), Postives = 96/137 (70.07%), Query Frame = 3 Query: 288 DYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 DY+ K++LIGDS VGKS +L RF+ F+ TIG++F+ RT+ + K +K QIWDTAGQER+R +T+AYYRGA+G +L+YD++ ++SFD++ W + HA +N+ ILIG + D E+QR V E + +A + Sbjct: 7 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADE 143
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.241e-33 Identity = 62/139 (44.60%), Postives = 101/139 (72.66%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIA 692 +Q DY+FK++LIG+S+VGK+ L R+A F+ +T+G++F+ +T+ K +K QIWDTAGQERYR +T+AYYRGA+G +L+YDI+ ++SF + W ++++++ N +IL+G + DLE++R VP ED + +A Sbjct: 16 DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLA 154
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.241e-33 Identity = 65/143 (45.45%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 279 QKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPR-WLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQKED 704 ++ DY+FK+++IGDS GKS +L RFA + +S +TIGV+F+ +T+ I + ++K QIWDTAGQER+R +TS YYRGA G + VYD++ + SFDHI WL+++ +A N+ +LIG + DL + R V ++AK +A++ + Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNN 144
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.241e-33 Identity = 66/141 (46.81%), Postives = 103/141 (73.05%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 N DY+FK++LIGDS VGKS +L RFA ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R +TS+YYRGA G ++VYD++ ++SF+++ +WL+E+ +A +N+ +L+G +SDL ++ V AKE A + Sbjct: 5 NPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQ 145
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.621e-33 Identity = 62/141 (43.97%), Postives = 103/141 (73.05%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 +Q DY+FK+++IG+S+VGK+ L R+A F+ +T+G++F+ +T+ K VK QIWDTAGQERYR +T+AYYRGA+G +L+YDI+ +SF+ + W ++++++ N +IL+G + D+EE+R VPTE + +A++ Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQ 156
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.621e-33 Identity = 62/141 (43.97%), Postives = 103/141 (73.05%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 +Q DY+FK+++IG+S+VGK+ L R+A F+ +T+G++F+ +T+ K VK QIWDTAGQERYR +T+AYYRGA+G +L+YDI+ +SF+ + W ++++++ N +IL+G + D+EE+R VPTE + +A++ Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQ 156
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.621e-33 Identity = 62/141 (43.97%), Postives = 103/141 (73.05%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIAQK 698 +Q DY+FK+++IG+S+VGK+ L R+A F+ +T+G++F+ +T+ K VK QIWDTAGQERYR +T+AYYRGA+G +L+YDI+ +SF+ + W ++++++ N +IL+G + D+EE+R VPTE + +A++ Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQ 156
BLAST of FC920798 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.621e-33 Identity = 66/139 (47.48%), Postives = 102/139 (73.38%), Query Frame = 3 Query: 276 NQKIDYVFKVVLIGDSAVGKSQILARFARSEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDISRRQSFDHIPRWLEELRSHADKNIVIILIGKQSDLEEQRAVPTEDAKEIA 692 N + DY+FK++LIGDS VGKS +L RFA ++ +TIGV+F+ RT+ + K++K QIWDTAGQER+R VTS+YYRGA G ++VYD++ ++S+ ++ +WL+E+ +A +N+ +L+G +SDL ++ V AKE A Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFA 140 The following BLAST results are available for this feature:
BLAST of FC920798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920798 ID=FC920798; Name=FC920798; organism=Citrus clementina; type=EST; length=712bpback to top |