FC920806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920806 vs. ExPASy Swiss-Prot
Match: RL4_MACFA (60S ribosomal protein L4 OS=Macaca fascicularis GN=RPL4 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.562e-68 Identity = 128/203 (63.05%), Postives = 150/203 (73.89%), Query Frame = 1 Query: 88 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGNRPGKGKMRNRRYISR 696 RPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N QKRY P+LVM++GH IE VPE+PLVV D E +KT A+ +LK++ A+ D +K SQ R GKGKMRNRR I R Sbjct: 5 RPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHSIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 204
BLAST of FC920806 vs. ExPASy Swiss-Prot
Match: RL4A_XENLA (60S ribosomal protein L4-A OS=Xenopus laevis GN=rpl4-A PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.562e-68 Identity = 125/203 (61.58%), Postives = 153/203 (75.37%), Query Frame = 1 Query: 88 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGNRPGKGKMRNRRYISR 696 RPLI+V S +G+ + V +P V +A IRPDIV FVH+N+ KN+RQPYAVS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N QKRY P+L+M++GH+IE +PE+PLVV D ES +KT A+ +LK++ A+ D +K SQ R GKGKMRNRR I R Sbjct: 9 RPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAVSKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKLKAWNDIKKVYASQRMRAGKGKMRNRRRIQR 208
BLAST of FC920806 vs. ExPASy Swiss-Prot
Match: RL4_PONAB (60S ribosomal protein L4 OS=Pongo abelii GN=RPL4 PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 4.370e-68 Identity = 128/203 (63.05%), Postives = 150/203 (73.89%), Query Frame = 1 Query: 88 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGNRPGKGKMRNRRYISR 696 RPLI+V S +G+ + V LP V KA IRPDIV FVH+N+ KN+RQPYAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR++N QKRY P+LVM++GH+IE VPE+PLVV D E +KT A+ +LK++ A D +K SQ R GKGKMRNRR I R Sbjct: 5 RPLISVYSEKGE---SSGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKARNDIKKVYASQRMRAGKGKMRNRRRIQR 204
BLAST of FC920806 vs. ExPASy Swiss-Prot
Match: RL4A_SCHPO (60S ribosomal protein L4-A OS=Schizosaccharomyces pombe GN=rpl4a PE=1 SV=2) HSP 1 Score: 251.136 bits (640), Expect = 4.090e-66 Identity = 119/203 (58.62%), Postives = 152/203 (74.88%), Query Frame = 1 Query: 88 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGNRPGKGKMRNRRYISR 696 RP +++ S +G ++ S T+ LP V KA IRPD+V VH+ ++KN RQPYAVS KAGHQTSAESWGTGRA++RIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH K+N N+KRY PSL++ARGH+IE +PE+PLVV D+ +S +KT A+ +LK+I AY D K +S+ R GKGK+RNRR++ R Sbjct: 5 RPTVSIYSKDGSVS---SETIALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKAGHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQNEKRYAISSAVAASGVPSLLLARGHRIEEIPEVPLVVDDAVQSFQKTKEAVALLKEIKAYRDVVKVANSRKLRAGKGKLRNRRHVQR 204
BLAST of FC920806 vs. ExPASy Swiss-Prot
Match: RL4B_SCHPO (60S ribosomal protein L4-B OS=Schizosaccharomyces pombe GN=rpl4b PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.030e-65 Identity = 118/203 (58.13%), Postives = 152/203 (74.88%), Query Frame = 1 Query: 88 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGNRPGKGKMRNRRYISR 696 RP +++ + +G ++ S T+ LP V KA IRPD+V VH+ ++KN RQPYAVS KAGHQTSAESWGTGRA++RIPRV GGGTHR+GQ AFGNMCR GRMFAPTK WR+WH K+N N+KRY PSL++ARGH+IE +PE+PLVV D+ +S +KT A+ +LK+I AY D K +S+ R GKGK+RNRR++ R Sbjct: 5 RPTVSIYNKDGSVS---SETLALPFVFKAPIRPDLVRSVHTAVAKNKRQPYAVSEKAGHQTSAESWGTGRALARIPRVGGGGTHRSGQAAFGNMCRSGRMFAPTKTWRKWHVKVNQNEKRYAIASAVAASGVPSLLLARGHRIEEIPEVPLVVDDAVQSFQKTKEAVALLKEIKAYRDVIKVANSRKLRAGKGKLRNRRHVQR 204
BLAST of FC920806 vs. ExPASy Swiss-Prot
Match: RL4B_YEAST (60S ribosomal protein L4-B OS=Saccharomyces cerevisiae GN=RPL4B PE=1 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 4.233e-63 Identity = 120/203 (59.11%), Postives = 147/203 (72.41%), Query Frame = 1 Query: 88 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGNRPGKGKMRNRRYISR 696 RP +TV SL G+ +A +PLP V A IRPDIV V ++++KN RQ YAVS KAGHQTSAESWGTGRAV+RIPRV GGGT R+GQGAFGNMCRGGRMFAPTK WR+W+ K+N N+KRY SLV+ARGH++E +PE+PLVVS ES++KT A+ LK +GA++D K S+ R GKGK RNRR+ R Sbjct: 3 RPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQR 202
BLAST of FC920806 vs. ExPASy Swiss-Prot
Match: RL4A_YEAST (60S ribosomal protein L4-A OS=Saccharomyces cerevisiae GN=RPL4A PE=1 SV=4) HSP 1 Score: 241.121 bits (614), Expect = 4.233e-63 Identity = 120/203 (59.11%), Postives = 147/203 (72.41%), Query Frame = 1 Query: 88 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGNRPGKGKMRNRRYISR 696 RP +TV SL G+ +A +PLP V A IRPDIV V ++++KN RQ YAVS KAGHQTSAESWGTGRAV+RIPRV GGGT R+GQGAFGNMCRGGRMFAPTK WR+W+ K+N N+KRY SLV+ARGH++E +PE+PLVVS ES++KT A+ LK +GA++D K S+ R GKGK RNRR+ R Sbjct: 3 RPQVTVHSLTGEATANA---LPLPAVFSAPIRPDIVHTVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGTGRSGQGAFGNMCRGGRMFAPTKTWRKWNVKVNHNEKRYATASAIAATAVASLVLARGHRVEKIPEIPLVVSTDLESIQKTKEAVAALKAVGAHSDLLKVLKSKKLRAGKGKYRNRRWTQR 202
BLAST of FC920806 vs. ExPASy Swiss-Prot
Match: RL4_TRYBB (60S ribosomal protein L4 OS=Trypanosoma brucei brucei GN=RPL4 PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.825e-61 Identity = 116/203 (57.14%), Postives = 143/203 (70.44%), Query Frame = 1 Query: 88 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGNRPGKGKMRNRRYISR 696 RP ++V S D T LP V A IR D+V FVH+N++KNSRQPYAV+R +G + S ESWGTGRAV+RIPR+ GGGT +G GAFGNMCRGGRMFAPTKI+RRWHRKIN++QKR+ P+LVM+RGHKIE V E+PLVV D + EKT A+ LK +GA D + DS+ R G+GKMRNRRY++R Sbjct: 4 RPSVSVYSASEDKVV---GTCSLPAVFTAPIRHDVVQFVHTNMAKNSRQPYAVNRLSGMKHSTESWGTGRAVARIPRIHGGGTSMSGAGAFGNMCRGGRMFAPTKIFRRWHRKINLHQKRFAVVSALAASSLPALVMSRGHKIENVAEVPLVVEDGVRAYEKTKEAMTFLKTVGAIDDVNRVNDSRQIRAGRGKMRNRRYVAR 203
BLAST of FC920806 vs. ExPASy Swiss-Prot
Match: RL4_DICDI (60S ribosomal protein L4 OS=Dictyostelium discoideum GN=rpl4 PE=1 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.153e-60 Identity = 110/181 (60.77%), Postives = 139/181 (76.80%), Query Frame = 1 Query: 148 VPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVV-SDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGNRPGKGKMRNRRY 687 V LP+V+ IRPD+V FVH+N++KN+RQ Y + AG QTSAESWGTGRAV+RIPRVPG GTHR+GQGAFGNMCRGGRM+ P K WRRW+RK+NVNQKRY P+LVMARGH+I + E+PLV+ ++S ++++KT AA+++LK+I AYAD K DS+ R G GK RNRRY Sbjct: 20 VKLPNVLTTPIRPDLVNFVHTNLNKNARQAYGAAPYAGEQTSAESWGTGRAVARIPRVPGSGTHRSGQGAFGNMCRGGRMYGPNKTWRRWNRKVNVNQKRYAVVSALAASAVPALVMARGHRINGINEVPLVIANESVDTLQKTKAAVELLKKINAYADVTKVIDSKHIRAGAGKARNRRY 200
BLAST of FC920806 vs. ExPASy Swiss-Prot
Match: RL4_DROME (60S ribosomal protein L4 OS=Drosophila melanogaster GN=RpL4 PE=2 SV=2) HSP 1 Score: 232.261 bits (591), Expect = 1.966e-60 Identity = 116/203 (57.14%), Postives = 147/203 (72.41%), Query Frame = 1 Query: 88 RPLITVQSLEGDMATDASSTVPLPDVMKASIRPDIVGFVHSNISKNSRQPYAVSRKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYXXXXXXXXXXXPSLVMARGHKIETVPEMPLVVSDSAESVEKTSAALKVLKQIGAYADAEKAKDSQGNRPGKGKMRNRRYISR 696 RPL++V + + + A D + + LP V KA IRPD+V VH + +N+RQ YAVS AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK +RRWHRK+NVNQ+RY P+LV ++GH I+ V E PLVVSD + V+KT A+ L+++ +AD +K SQ R G+G MR+RR I+R Sbjct: 7 RPLVSVYTEKNEPAKDKN--ICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQRRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQRFRAGRGTMRDRRRIAR 207 The following BLAST results are available for this feature:
BLAST of FC920806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920806 ID=FC920806; Name=FC920806; organism=Citrus clementina; type=EST; length=697bpback to top |