FC920808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.536e-70 Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN+ PSD+GGWCNPPRPHFD+A P FL +AQYRAGIVPVS+RRVPC K+GG+RFT+NG YFNLVLVTNVAGAGD+ VS+KG Sbjct: 100 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKG 186 HSP 2 Score: 135.961 bits (341), Expect = 3.536e-70 Identity = 67/103 (65.05%), Postives = 74/103 (71.84%), Query Frame = 3 Query: 105 VALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 V LF A G G WQSAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G +CG+C+EL+C C PG +I +TATNF PP Sbjct: 6 VLFLLFLARQASAAGY---GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPG--SITVTATNFCPP 103
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 3.536e-70 Identity = 66/87 (75.86%), Postives = 76/87 (87.36%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN+ PSD+GGWCNPPRPHFD+A P FL +AQYRAGIVPVS+RRVPC K+GG+RFT+NG YFNLVLVTNVAGAGD+ VS+KG Sbjct: 100 FCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKG 186 HSP 2 Score: 135.961 bits (341), Expect = 3.536e-70 Identity = 67/103 (65.05%), Postives = 74/103 (71.84%), Query Frame = 3 Query: 105 VALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 V LF A G G WQSAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFN+G +CG+C+EL+C C PG +I +TATNF PP Sbjct: 6 VLFLLFLARQASAAGY---GGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPG--SITVTATNFCPP 103
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.739e-69 Identity = 63/87 (72.41%), Postives = 77/87 (88.51%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPNFAQ ++ GGWCNPP+ HFDLA P+FL++AQY+AG+VPV YRRV CR++GGIRFTING YFNLVL+TNVAGAGD++ VS+KG Sbjct: 105 FCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKG 191 HSP 2 Score: 137.117 bits (344), Expect = 1.739e-69 Identity = 67/108 (62.04%), Postives = 77/108 (71.30%), Query Frame = 3 Query: 105 VALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPPELRSA 428 ++LSL K ++ G W +A ATFYGG+DASGTMGGACGYGNLYSQGYG NTAALSTALFN G SCGACF++KC DP+WC G I +T TNF PP A Sbjct: 9 ISLSLMMMIMWKSVDGYSSG-WVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGG--TITVTGTNFCPPNFAQA 113
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 8.553e-69 Identity = 63/84 (75.00%), Postives = 68/84 (80.95%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 G WQ HATFYGG DASGTMGGACGYGNLY QGYG NTAALSTALFNNGL+CGAC+E+KC DP+WC I +TATNF PP Sbjct: 28 GGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCL--GSTITVTATNFCPP 109 HSP 2 Score: 139.428 bits (350), Expect = 8.553e-69 Identity = 63/87 (72.41%), Postives = 72/87 (82.76%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN +DNGGWCNPP HFDLA P FL++AQYRAGIVPVS+RRVPC K+GGIRFTING YFNLVL++NV GAGD+ VS+KG Sbjct: 106 FCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKG 192
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 1.897e-68 Identity = 65/87 (74.71%), Postives = 73/87 (83.91%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPNFA +DNGGWCNPP HFDLA P FL++AQYRAGIVPV++RRVPC K GGIRFTING YF+LVL+TNV GAGDI VS+KG Sbjct: 108 FCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKG 194 HSP 2 Score: 140.198 bits (352), Expect = 1.897e-68 Identity = 62/89 (69.66%), Postives = 73/89 (82.02%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPPELRSA 428 G W+ HATFYGG+DASGTMGGACGYGNL+SQGYG+ TAALSTALFN+G CGACFEL+C DP+WC PG +I+++ATNF PP A Sbjct: 30 GGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPG--SIIVSATNFCPPNFALA 116
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 5.479e-68 Identity = 67/88 (76.14%), Postives = 73/88 (82.95%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC---GGDPQWCNPGNPAILITATNFWPP 413 GG W SAHATFYGG DASGTMGGACGYGNLYSQGYG NTAALSTALFNNGLSCGACFE++C GG C PG ++++TATNF PP Sbjct: 61 GGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPG--SVVVTATNFCPP 146 HSP 2 Score: 136.732 bits (343), Expect = 5.479e-68 Identity = 61/86 (70.93%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 660 F PPN A PSD+GGWCNPPR HFD++ P+F ++A ++AGIVPVSYRRV C+K+GGIRFTING YFNLVLVTNV GAGD+ V+VK Sbjct: 143 FCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVK 228
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.981e-67 Identity = 62/85 (72.94%), Postives = 69/85 (81.18%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD-PQWCNPGNPAILITATNFWPP 413 G WQ HATFYGG DASGTMGGACGYGNLYSQGYG +TAALSTALFN GLSCG+C+EL+C GD + C PG + +TATNF PP Sbjct: 26 GQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPP 110 HSP 2 Score: 137.502 bits (345), Expect = 5.981e-67 Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN+A PSD GGWCNPPR HFDLA P FL++A++ AGIVPVS+RRV C ++GG+RFT+NG YFNLVLVTNV GAGD+ ++VKG Sbjct: 107 FCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKG 193
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 1.435e-62 Identity = 67/106 (63.21%), Postives = 74/106 (69.81%), Query Frame = 3 Query: 102 SVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFWPP 413 S A + AT P V A WQ AHATFYGG+DASGTMGGACGYGNLYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNF PP Sbjct: 18 STAAANTATTTPTNP-VAAPTQWQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTITATNFCPP 121 HSP 2 Score: 129.028 bits (323), Expect = 1.435e-62 Identity = 58/87 (66.67%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN+ PSDNGGWCNPPRPHFD+A P + K+ Y AGI+PV Y+RVPC K+GG+RFTING YF LVLVTNVA AG I + V G Sbjct: 118 FCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQRVPCVKKGGLRFTINGHDYFQLVLVTNVAAAGSIKSMEVMG 204
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 1.436e-62 Identity = 56/87 (64.37%), Postives = 70/87 (80.46%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN+A PSD+GGWCNPPRPHFD+A P + ++ YR GIVPV++RRVPCR+RGG+RFT+ G YF LVLVTNVA AG + + V+G Sbjct: 113 FCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRG 199 HSP 2 Score: 130.183 bits (326), Expect = 1.436e-62 Identity = 64/114 (56.14%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 78 LFRMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFWPP 413 +F ++ F S AL A+ + FA W ATFYGGSDASGTMGGACGYGNLY+QGYG TAALSTALF++G SCG C+ L C DP+WC G ++ +TATNF PP Sbjct: 7 VFAVVAFVSYALLAAASTTVE---AFAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAG-ASVTVTATNFCPP 116
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 9.199e-62 Identity = 66/113 (58.41%), Postives = 77/113 (68.14%), Query Frame = 3 Query: 90 LCFFSVAL---SLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFWPP 413 L FF++A + TA+ P V WQ AHATFYGG+DASGTMGG CGYG+LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNF PP Sbjct: 10 LVFFAIAAVGCTQLTTADDAAPPV-----WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTITATNFCPP 116 HSP 2 Score: 128.642 bits (322), Expect = 9.199e-62 Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN+ PSDNGGWCNPPRPHFD+A P + K+ Y AGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I + + G Sbjct: 113 FCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQRVPCIKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMG 199 The following BLAST results are available for this feature:
BLAST of FC920808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920808 ID=FC920808; Name=FC920808; organism=Citrus clementina; type=EST; length=676bpback to top |