FC920808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.564e-61 Identity = 66/112 (58.93%), Postives = 75/112 (66.96%), Query Frame = 3 Query: 84 RMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFWPP 413 RML A+ A A G W AHATFYGG+DASGTMGGACGYGNLY+QGYG TAALSTALFN+GL+CG C++L C D WC PG ++ ITATNF PP Sbjct: 6 RMLAAVVCAIMPAAAMAAGGVGALEPSGWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPG-VSVTITATNFCPP 116 HSP 2 Score: 128.257 bits (321), Expect = 1.564e-61 Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN+ PSD+GGWCNPPRPHFD+A P + K+ YR GI+PV Y+RVPC K+GG+RFTING YF LVL+TNV AG I + VKG Sbjct: 113 FCPPNWDLPSDSGGWCNPPRPHFDMAQPAWEKIGIYRGGIIPVIYQRVPCMKKGGVRFTINGHDYFQLVLLTNVGAAGSIKAMDVKG 199
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.040e-61 Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 GPW +AHATFYGG DASGTMGGACGYGNLYSQGYG+ TAALSTALF+ GLSCGACFEL C DPQWC G +I++TATNF PP Sbjct: 36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGR-SIVVTATNFCPP 118 HSP 2 Score: 111.694 bits (278), Expect = 2.040e-61 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 1 Query: 415 NFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 NF P GG C+PP HFDL+ P++ K+A Y++GI+PV YRRV C++ GGIRFTING YFNLVLVTNV GAGD+ VS+KG Sbjct: 114 NFCPP---GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKG 193
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 4.517e-61 Identity = 59/87 (67.82%), Postives = 68/87 (78.16%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN+ PSDNGGWCNPPRPHFD+A P + K+ YRAGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I + V G Sbjct: 131 FCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVIYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGLIKSMDVMG 217 HSP 2 Score: 126.331 bits (316), Expect = 4.517e-61 Identity = 58/84 (69.05%), Postives = 65/84 (77.38%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFWPP 413 W AHATFYGG+DASGTMGGACGYG+LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + ITATNF PP Sbjct: 52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPG-VTVTITATNFCPP 134
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 2.220e-60 Identity = 58/87 (66.67%), Postives = 68/87 (78.16%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN+ PSDNGGWCNPPRPHFD+A P + K+ YRAGI+PV Y+RVPC K+GG+RFTING YFNLVLVTNVA G I + + G Sbjct: 129 FCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMG 215 HSP 2 Score: 122.479 bits (306), Expect = 2.220e-60 Identity = 56/84 (66.67%), Postives = 64/84 (76.19%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFWPP 413 W AHATFYGG+DASGTMGGACGY +LYSQGYG AALSTALFN+G SCG C+++ C PQWC PG + +TATNF PP Sbjct: 50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTVTATNFCPP 132
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.423e-59 Identity = 67/115 (58.26%), Postives = 74/115 (64.35%), Query Frame = 3 Query: 72 MALFRMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG-GDPQWCNPGNPAILITATNFWPP 413 MA RML + +L TA+A W A ATFYGGSDASGTMGGACGYG+LY GYG TAALSTALFN G SCGACF + C QWC PG +I +TATNF PP Sbjct: 1 MAAARMLVLLASLCALLLTASA--------AKWTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGT-SITVTATNFCPP 106 HSP 2 Score: 123.25 bits (308), Expect = 1.423e-59 Identity = 53/87 (60.92%), Postives = 67/87 (77.01%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN+A D GGWCNPPR HFD++ P + +A YRAGIVPV+YRRVPC++ GGIRF +NG YF LVLVTNV G+G + ++ +KG Sbjct: 103 FCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKG 189
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.152e-59 Identity = 60/85 (70.59%), Postives = 71/85 (83.53%), Query Frame = 1 Query: 409 PPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 PPN Q +DNGGWCNPPR HFDL+MP FL++AQ +AGIVP+SYRRVPC K GGIR+TI G YFNLV+V+NV GAGD+ +SVKG Sbjct: 122 PPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKG 206 HSP 2 Score: 115.931 bits (289), Expect = 3.152e-59 Identity = 55/108 (50.93%), Postives = 67/108 (62.04%), Query Frame = 3 Query: 99 FSVALSLFATANAKIP---GVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 F VAL+ A K+ G F GPW+ AHATFYGG D SGT+ GACGY + +GYGV T A+ST LF G CGAC+E+KC P C G +++TATN PP Sbjct: 16 FLVALAAGDAAPPKVHRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPP 123
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.153e-59 Identity = 56/84 (66.67%), Postives = 69/84 (82.14%), Query Frame = 1 Query: 409 PPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 660 P N A P D GGWCNPP HFDL+ P FL++A++++GIVPVSYRRV CR++GG+RFTING YFNLVLV+NV GAGD+ V+VK Sbjct: 116 PANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRRVACRRKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVK 199 HSP 2 Score: 122.094 bits (305), Expect = 3.153e-59 Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = 3 Query: 87 MLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC----GGDPQWCNP--GNPAILITATNFWP 410 +L S++ SL +++ A A G W AHATFYGG+DASGTMGGACGYGN Y QGYG +TAALS +F +GLSCGACFEL+C GGD + C P +I++TAT+ P Sbjct: 9 LLVLLSLSSSLSSSSAA------AAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCP 116
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 5.837e-58 Identity = 63/116 (54.31%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 72 MALFRMLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFWPP 413 M + R + AL + + + A A G W S ATFYGG DASGTMGGACGYGNLY+QGYGV AALSTALFN G SCG C+ + C P+WC G A+ ITATN PP Sbjct: 1 MMVIRFFAVLAAALCITSASAA------AAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGT-AVTITATNLCPP 109 HSP 2 Score: 122.479 bits (306), Expect = 5.837e-58 Identity = 51/85 (60.00%), Postives = 69/85 (81.18%), Query Frame = 1 Query: 409 PPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 PPN+A +D+GGWCNPPRPHFD++ P + + YRAGIVPV Y++V C ++GG+RFT++GF YF LVL+TNVAG+G + +SVKG Sbjct: 108 PPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKG 192
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.293e-57 Identity = 55/86 (63.95%), Postives = 70/86 (81.40%), Query Frame = 1 Query: 409 PPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGP 666 PPN+A S++GGWCNPPR HFD+A P +L++ Y+AGIVPV Y+RVPC K+GG+RFT+ GF YF LVL++NVAG+G I V VKGP Sbjct: 113 PPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGP 198 HSP 2 Score: 117.857 bits (294), Expect = 1.293e-57 Identity = 54/84 (64.29%), Postives = 62/84 (73.81%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFWPP 413 W S ATFYGGSDASGTMGGACGYGNLY GYG NTAALS+ALFN+G SCG C+++ C +P+WC G + IT TN PP Sbjct: 32 WSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGR-TVTITGTNLCPP 114
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 8.280e-57 Identity = 56/85 (65.88%), Postives = 66/85 (77.65%), Query Frame = 1 Query: 409 PPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 PPN+A P+D GGWCNPPR HFD+A P +LK+ Y GIVPV Y+RVPC K+GG+RFTING YF LVLV+NV G G I VS+KG Sbjct: 115 PPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKG 199 HSP 2 Score: 115.546 bits (288), Expect = 8.280e-57 Identity = 55/89 (61.80%), Postives = 63/89 (70.79%), Query Frame = 3 Query: 153 FAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFWPP 413 F W A ATFYGGSDASGTMGGACGYG+LYS GYG NTAALST LFN+G SCG C+ + C D ++C G ++ ITATN PP Sbjct: 29 FTASGWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGT-SVTITATNLCPP 116 The following BLAST results are available for this feature:
BLAST of FC920808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC920808 ID=FC920808; Name=FC920808; organism=Citrus clementina; type=EST; length=676bpback to top |