FC920808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.138e-51 Identity = 56/104 (53.85%), Postives = 68/104 (65.38%), Query Frame = 3 Query: 102 SVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 +V +SL A A + F W AHATFYG AS TMGGACGYGNLY+ GYG +TAALST LF +G CG C++++C G C G+PAI +TATN PP Sbjct: 16 AVIISL-AGAATTVDAKFRAMQWTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPP 117 HSP 2 Score: 109.383 bits (272), Expect = 2.138e-51 Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 1 Query: 409 PPNFAQPSDNGG--WCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 660 PPN+A+ D GG WCNPPR HFDL+ P F+++A +RAGIVPV YRRVPC + GG+RF + G Y+ L V NVAGAGD+ + VK Sbjct: 116 PPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVK 201
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 6.162e-51 Identity = 48/87 (55.17%), Postives = 66/87 (75.86%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PP+F +P+DN WCNPP+ HFDL+ PMFLK+A+Y+AG+VPV +RRVPC K GG++F I G +F ++L NV GAG + + +KG Sbjct: 166 FCPPDFTKPNDN--WCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKG 250 HSP 2 Score: 110.923 bits (276), Expect = 6.162e-51 Identity = 51/83 (61.45%), Postives = 59/83 (71.08%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPPE 416 W ATFYG + T GACGYG+L+ QGYG+ TAALSTALFNNG CGAC+E+ C PQWC PG +I ITATNF PP+ Sbjct: 90 WGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPG--SIKITATNFCPPD 170
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.367e-50 Identity = 50/83 (60.24%), Postives = 60/83 (72.29%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPPE 416 W A ATFYG T GACGYG+L+ QGYG+ TAALSTALFN G +CGAC+++ C DPQWC PG ++ ITATNF PP+ Sbjct: 48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPG--SVKITATNFCPPD 128 HSP 2 Score: 107.457 bits (267), Expect = 1.367e-50 Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PP++++ G WCNPP+ HFDL++PMFLK+AQY+AG+VPV YRR+ C + GG++F G YF ++L NV GAGDI + VKG Sbjct: 124 FCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKG 208
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.369e-50 Identity = 53/88 (60.23%), Postives = 60/88 (68.18%), Query Frame = 3 Query: 156 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNFWPP 413 A W ATFYGG+D SGTMGGACGYGNLY QGYG+N AALST LFN+G SCG C+ + C P WC G AI +T TN+ PP Sbjct: 19 ARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGK-AITVTGTNYCPP 105 HSP 2 Score: 108.227 bits (269), Expect = 1.369e-50 Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 1 Query: 409 PPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 PPN+ P GGWCN RPHFD++ P + + Y AGI+P+ Y++V C + GG+RFTINGF YF LVLVTN+AG+G I +SVKG Sbjct: 104 PPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKG 186
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 2.322e-50 Identity = 51/83 (61.45%), Postives = 59/83 (71.08%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPPE 416 W A ATFYG T GACGYG+L+ QGYG+ TAALSTALFN G +CGAC+++ C DPQWC PG I ITATNF PP+ Sbjct: 55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPG--TIKITATNFCPPD 135 HSP 2 Score: 107.457 bits (267), Expect = 2.322e-50 Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PP++++ G WCNPP+ HFDL++PMFLK+AQY+AG+VPV YRR+ C + GG++F G YF ++L NV GAGDI + VKG Sbjct: 131 FCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKG 215
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 5.149e-50 Identity = 54/84 (64.29%), Postives = 59/84 (70.24%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFWPP 413 W ATFYGG+D SGTMGGACGYGNLY QGYG+N AALST LFNNG SCG C+ + C D P C G AI +T TNF PP Sbjct: 23 WLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGT-AITVTGTNFCPP 105 HSP 2 Score: 105.145 bits (261), Expect = 5.149e-50 Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPN+ P GGWCN RPHFD++ P + + Y AGIVP+ Y++V C + GG+RFTI G YF LVLVTN+AG+G I +SVKG Sbjct: 102 FCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKG 186
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.591e-47 Identity = 51/85 (60.00%), Postives = 58/85 (68.24%), Query Frame = 3 Query: 156 AGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKC--GGDPQWCNPGNPAILITATNF 404 A W ATFYGG+D SGTMGGACGYGNLY Q YG+N AALST LFN+G SCG C+ + C G P WC G AI +T TN+ Sbjct: 19 ARSDWLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGK-AITVTGTNY 102 HSP 2 Score: 100.908 bits (250), Expect = 8.591e-47 Identity = 44/75 (58.67%), Postives = 57/75 (76.00%), Query Frame = 1 Query: 439 GGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 GGWCN RP+FD++ P + + Y AGIVP+ Y++V C + GG+RF INGF YF LVLVTN+AG+G IV +SVKG Sbjct: 103 GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKG 177
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 7.133e-46 Identity = 53/84 (63.10%), Postives = 65/84 (77.38%), Query Frame = 1 Query: 409 PPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 660 PPN+ P+D+GGWCNPPR HFD+A P FLKLAQ AGIVPV YRRVPC++ GG+RF + G Y+ L+ V NV GAGD+ +SVK Sbjct: 133 PPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVK 216 HSP 2 Score: 86.6557 bits (213), Expect = 7.133e-46 Identity = 43/84 (51.19%), Postives = 50/84 (59.52%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGT-MGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 W ATFYG G GGACGY N Y TAALST LF +G CG C+EL+C P WCNPG+P+++IT TN PP Sbjct: 52 WHDGSATFYGDPSGMGDDFGGACGYVSNDIVSLYSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPP 134
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.806e-42 Identity = 42/84 (50.00%), Postives = 60/84 (71.43%), Query Frame = 1 Query: 415 NFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQY-RAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 NF ++N GWCN PR HFD++ P F ++A+ GIVPV YRRV C++RGG+RFT+ G FN+V+++NV G G + V+V+G Sbjct: 105 NFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRG 188 HSP 2 Score: 95.9005 bits (237), Expect = 5.806e-42 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCG--GDPQWCNPGNPAILITATNFWP 410 W AHAT+YG +D+ ++GGACGY N Y G+G +TAALS LF +G SCG C++++C DP+WC G A+ +TATNF P Sbjct: 27 WIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRG-AAVTVTATNFCP 108
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 7.559e-42 Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PN+ D GG CNPP HF L + F K+A ++AG +PV YRR+ CRK G +RFT++G F VL+TNVAG+GDI V +KG Sbjct: 117 FCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKG 203 HSP 2 Score: 95.1301 bits (235), Expect = 7.559e-42 Identity = 42/82 (51.22%), Postives = 54/82 (65.85%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 W+ A AT+Y ++ +GGACGYG+L GYG+ T LS LF G CGACFEL+C D +WC PG +I++TATNF P Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGT-SIILTATNFCAP 120 The following BLAST results are available for this feature:
BLAST of FC920808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920808 ID=FC920808; Name=FC920808; organism=Citrus clementina; type=EST; length=676bpback to top |