FC920808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.811e-40 Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PNF P+D GG CNPP HF L + F K+A ++AG++P+ YRRV C + GG+RF + G +F VL++NV GAGD+ V +KG Sbjct: 109 FCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKG 195 HSP 2 Score: 90.1225 bits (222), Expect = 1.811e-40 Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = 3 Query: 147 GVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 G A W+SA A++Y +D +GGACG+G+L GYG+ T LSTALF G +CG C+E+KC D ++C PG +I++TATNF P Sbjct: 26 GSSALSEWRSAKASYYA-ADPEDAIGGACGFGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGT-SIVVTATNFCAP 112
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.959e-39 Identity = 46/83 (55.42%), Postives = 56/83 (67.47%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGT-MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 W A A +YG GT + GACGYG+L GYG+ TAALSTALFN+G SCGAC+E+ C +PQ C G +I ITAT+ PP Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSG--SIKITATDLCPP 125 HSP 2 Score: 90.1225 bits (222), Expect = 1.959e-39 Identity = 40/73 (54.79%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 445 WCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 WC P HFDL++PMF+K+AQ +A +VPV YRRVPC K GG++F + G +L NV GAGDI+ VS KG Sbjct: 129 WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKG 201
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 7.940e-38 Identity = 53/98 (54.08%), Postives = 62/98 (63.27%), Query Frame = 3 Query: 135 AKIPGVFAG----GPWQSAHATFYGGSDASGTM-GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 AK+P V G GPW HATFYGG DASGT GGACGY + + GYG TAA+S ALF+NG CGAC+ELK GD +++TATN PP Sbjct: 67 AKMPHVNHGRYKCGPWVDGHATFYGGRDASGTTEGGACGYKD--ADGYGAMTAAVSPALFDNGAGCGACYELK--GD------SGKTVVVTATNQAPP 154 HSP 2 Score: 86.6557 bits (213), Expect = 7.940e-38 Identity = 37/66 (56.06%), Postives = 53/66 (80.30%), Query Frame = 1 Query: 466 HFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 HFDL MP FL +A+ + G+VPVSYR+V C ++GGI++TI G +N+V+V NV GAGD+V+++VKG Sbjct: 163 HFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKG 228
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 7.955e-38 Identity = 42/89 (47.19%), Postives = 60/89 (67.42%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKGPT 669 F PPN SD GGWCN P+ H +L+ F +A+ RA ++P+ YRRV C +RGG+RF+++G +F VL++NV G++V V VKG T Sbjct: 108 FCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHT 196 HSP 2 Score: 85.5001 bits (210), Expect = 7.955e-38 Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 90 LCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTM--GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPP 413 LC F + LF A W+ A AT D S ++ GGACGYG+L + +A LS LFN G SCGAC E++C +WC G+P++++TAT+F PP Sbjct: 10 LCLFFILCRLFQAT--------AEDDWKIATATLSRDRDGSSSVATGGACGYGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPP 111
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.757e-34 Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PN D GGWCN P+ HF+++ FL++A+ +A IVPV +RRV C + GG+RFTI G F VL+TNVA G++ V VKG Sbjct: 112 FCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKG 198 HSP 2 Score: 73.559 bits (179), Expect = 3.757e-34 Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 3 Query: 222 GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPPEL 419 GGACGYG+L YG TA +S ALF G +CG C+E++C WC G+P +++TAT+F P L Sbjct: 52 GGACGYGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNL 117
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.749e-32 Identity = 59/87 (67.82%), Postives = 73/87 (83.91%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F PPNFAQ SDNGGWCNPPRPHFD+A P FL +A+Y+AGIVP+ Y++V CR+ GG+RFTING YF LVL++NVAG G+I +V +KG Sbjct: 107 FCPPNFAQASDNGGWCNPPRPHFDMAQPAFLTIAKYKAGIVPILYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIKG 193 HSP 2 Score: 129.798 bits (325), Expect = 1.282e-29 Identity = 68/113 (60.18%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 138 KIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGD--PQWCNPGNPAILITATNFWPPELRSALR*WRVVQPSSPSF 470 KI V AG W AHATFYGGSDASGTMGGACGYGNLY+ GY NTAALSTALFN+G SCG C+++ C PQWC G +I ITATNF PP A P P F Sbjct: 20 KISSVSAG--WLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGK-SITITATNFCPPNFAQASDNGGWCNPPRPHF 129
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.382e-31 Identity = 61/85 (71.76%), Postives = 68/85 (80.00%), Query Frame = 1 Query: 409 PPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 PPN+A D GGWCNPPRPHFD+A P F ++AQ RAG+VPV YRRV C K+GGIRFTI G YFNLVLVTNV GAGD+ VSVKG Sbjct: 104 PPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKG 188 HSP 2 Score: 127.487 bits (319), Expect = 6.362e-29 Identity = 81/158 (51.27%), Postives = 89/158 (56.33%), Query Frame = 3 Query: 72 MALFRMLCFFSVALSLFATANAKIPGVFAGGP--WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPPELRSALR*WRVVQPSSPSF---RSGHAYVPQARP--VPRWYR 524 M L R+L +VA A V AGG W S ATFYGGSDASGTMGGACGYGNLYS GYG +TAALSTALFNNG SCGACFE++CGG C G + +TATN PP A P P F + QAR VP YR Sbjct: 1 MELLRLLAVAAVA--------AMAAEVAAGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAG--TVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYR 147
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.622e-24 Identity = 52/91 (57.14%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPPELRSALR*W 440 W A ATFYG T GACGYGNL+ QGYG+ TAALSTALFN+G +CGAC+E+ C DPQWC PG ++ ITATNF P W Sbjct: 58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPG--SVKITATNFCPANYSKTTDLW 146 HSP 2 Score: 107.071 bits (266), Expect = 8.978e-23 Identity = 48/86 (55.81%), Postives = 64/86 (74.42%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVK 660 F P N+++ +D WCNPP+ HFDL++ MFLK+A+Y+AG+VPV YRR+PC K GG++F G YF +VL+ NV GAGDI V VK Sbjct: 134 FCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVK 217
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.622e-24 Identity = 52/91 (57.14%), Postives = 60/91 (65.93%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPPELRSALR*W 440 W A ATFYG T GACGYGNL+ QGYG+ TAALSTALFN+G +CGAC+E+ C DPQWC PG ++ ITATNF P W Sbjct: 52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPG--SVKITATNFCPANYSKTTDLW 140 HSP 2 Score: 109.383 bits (272), Expect = 1.809e-23 Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 1 Query: 403 FGPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGDIVRVSVKG 663 F P N+++ +D WCNPP+ HFDL++ MFLK+A+Y+AG+VPV YRR+PC K GG++F G YF +VL+ NV GAGDI V VKG Sbjct: 128 FCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKG 212
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.644e-15 Identity = 32/102 (31.37%), Postives = 58/102 (56.86%), Query Frame = 3 Query: 87 MLCFFSVALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILI 389 ++ F ++A + ++ A + W AT+YG ++ SGT GGACGY G++ + AA S +++ +G CG+C+++KC G+P C+ G P ++ Sbjct: 11 IVAFVALACCVLRSSVASVDHHRKLSGWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CS-GKPVTVV 110 HSP 2 Score: 40.4318 bits (93), Expect = 3.644e-15 Identity = 28/83 (33.73%), Postives = 39/83 (46.99%), Query Frame = 1 Query: 439 GGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG---GIRFTINGFRYFNLVLVTNVAGAGDIVRVSV 657 GG C HFDL+ F +A+ AG +PV Y RVPC+ +G R +Y+ VLV + G GD+ V + Sbjct: 117 GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDL 199 The following BLAST results are available for this feature:
BLAST of FC920808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920808 ID=FC920808; Name=FC920808; organism=Citrus clementina; type=EST; length=676bpback to top |