FC920808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPB5_ORYSJ (Expansin-B5 OS=Oryza sativa subsp. japonica GN=EXPB5 PE=2 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 7.995e-15 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILIT 392 G W S AT+YGG G+ GGACGY + Q + AA +LF NG CG+C+++KC G+ + C+ ++IT Sbjct: 42 GYGWSSGGATWYGGPQGDGSEGGACGYQSAVGQRPFSSMIAAGGPSLFKNGKGCGSCYQIKCTGN-RACSGRPVTVVIT 119 HSP 2 Score: 39.6614 bits (91), Expect = 7.995e-15 Identity = 24/82 (29.27%), Postives = 38/82 (46.34%), Query Frame = 1 Query: 439 GGWCNPPRPHFDLAMPMFLKLAQY-------RAGIVPVSYRRVPCRKRGGIRFTINGFR--YFNLVLVTNVAGAGDIVRVSV 657 GG C HFD++ F +A AG++ + Y+RVPCR + F ++ Y+ +LV G GD+ V + Sbjct: 124 GGVCLNEAAHFDMSGTAFGAMANRGMGDRLRSAGVLKIQYKRVPCRFAMNVAFKVDAGSNPYYLAILVQYANGDGDLAAVHI 205
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPB7_ORYSJ (Expansin-B7 OS=Oryza sativa subsp. japonica GN=EXPB7 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 6.459e-14 Identity = 31/89 (34.83%), Postives = 51/89 (57.30%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWPPEL 419 GG W +A AT+YG + +G GGACG+ N+ + T+ + LF +G CG+C++++C G P C+ ++IT N++P L Sbjct: 89 GGGWLNARATWYGAPNGAGPDDNGGACGFKNVNLPPFSAMTSCGNEPLFKDGKGCGSCYQIRCVGHPA-CSGLPETVIITDMNYYPVSL 176 HSP 2 Score: 32.3426 bits (72), Expect = 6.459e-14 Identity = 23/74 (31.08%), Postives = 37/74 (50.00%), Query Frame = 1 Query: 466 HFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG-GIRFTI--NGFRYFNLVLVTNVAGAGDIVRVSV 657 HFDL+ F +A+ AGI+ + +RRVPC+ G + F + + +LV G GD+V+V + Sbjct: 178 HFDLSGTAFGAMAKDNRNDELRHAGIIDIQFRRVPCQYPGLTVTFHVEQGSNPVYMAILVEYENGDGDVVQVDL 251
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 62.003 bits (149), Expect = 3.126e-13 Identity = 28/75 (37.33%), Postives = 49/75 (65.33%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGY-GNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILI 389 W + AT+YG ++ +G+ GGACGY G ++ + AA S +++ +GL CG+C+++KC G+ C+ GNP ++ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CS-GNPVTVV 109 HSP 2 Score: 33.4982 bits (75), Expect = 3.126e-13 Identity = 30/85 (35.29%), Postives = 40/85 (47.06%), Query Frame = 1 Query: 439 GGWCNPPRPHFDLAMPMFLKLA------QYRA-GIVPVSYRRVPCRKRGGIRFTI-----NGFRYFNLVLVTNVAGAGDIVRVSV 657 GG C HFDL+ F +A Q RA G++ + Y RVPC GG++ T + YF VLV G GD+ V + Sbjct: 116 GGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPC-NWGGVKLTFVVDVGSNPNYF-AVLVKYENGDGDLSGVEL 198
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 58.5362 bits (140), Expect = 5.274e-13 Identity = 33/97 (34.02%), Postives = 49/97 (50.52%), Query Frame = 3 Query: 105 VALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILIT 392 + S AT N + + W A AT+YG + G+ GGACGYG L + A++ LF NG CGAC++++C D C+ ++IT Sbjct: 19 IGSSALATTNRHV----SNSHWLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRC-LDKSICSRRAVTVIIT 110 HSP 2 Score: 36.1946 bits (82), Expect = 5.274e-13 Identity = 26/81 (32.10%), Postives = 40/81 (49.38%), Query Frame = 1 Query: 448 CNPPRPHFDLAMPMFLKLA-------QYRAGIVPVSYRRVPCRKRG-GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVK 660 C+ HFDL+ +F +LA G++PV YRR C+ RG I F +N ++ +LV G GDI + ++ Sbjct: 116 CSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIR 196
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXPB4_ORYSJ (Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXPB4 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 1.152e-12 Identity = 29/85 (34.12%), Postives = 49/85 (57.65%), Query Frame = 3 Query: 162 GPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWP 410 GPW A AT+YG + +G GGACG+ + + T+ + LF +G CG+C++++C D Q C+ + ++IT N++P Sbjct: 53 GPWTKARATWYGQPNGAGPDDNGGACGFKHTNQYPFMSMTSCGNQPLFKDGKGCGSCYKIRCTKD-QSCSGRSETVIITDMNYYP 136 HSP 2 Score: 32.3426 bits (72), Expect = 1.152e-12 Identity = 26/75 (34.67%), Postives = 38/75 (50.67%), Query Frame = 1 Query: 466 HFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG-GIRFTINGFR---YFNLVLVTNVAGAGDIVRVSV 657 HFDL+ F +LA+ +GI+ + + RVPC G I F + + YF VLV G GD+V+V + Sbjct: 141 HFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYF-AVLVEYEDGDGDVVQVDL 214
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXB10_MAIZE (Expansin-B10 OS=Zea mays GN=EXPB10 PE=1 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 1.500e-12 Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAIL-ITATNFWP 410 G W A AT+YG +G GG CGY ++ + A + +F +GL CG+CFE+KC P C+ G P ++ IT N+ P Sbjct: 47 GKDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC-DKPVECS-GKPVVVHITDMNYEP 131 HSP 2 Score: 38.1206 bits (87), Expect = 1.500e-12 Identity = 29/75 (38.67%), Postives = 38/75 (50.67%), Query Frame = 1 Query: 466 HFDLAMPMFLKLAQY-------RAGIVPVSYRRVPCRKRGGIRFTIN---GFRYFNLVLVTNVAGAGDIVRVSVK 660 HFDLA F +A+ +AGI+ + +RRV C+ + F + G Y L LV V G GDIV V VK Sbjct: 136 HFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYDSKVTFHLEKGCGPNYLAL-LVKYVDGDGDIVAVDVK 209
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 2.521e-12 Identity = 32/83 (38.55%), Postives = 45/83 (54.22%), Query Frame = 3 Query: 144 PGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQ-GYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILI 389 P V W +A AT+YG + G+ GGACGY Q + AA S +L+ G CGAC+E+KC + C+ G PA ++ Sbjct: 56 PSVTVTTGWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CS-GQPATVV 136 HSP 2 Score: 34.2686 bits (77), Expect = 2.521e-12 Identity = 34/95 (35.79%), Postives = 44/95 (46.32%), Query Frame = 1 Query: 439 GGWCNPPRPHFDLAMPMFLKLAQ-------YRAGIVPVSYRRVPCRKRG-GIRFTI----NGFRYFNLVLVTNVAGAGDIVRVSVK----GPTPM 675 GG C HFD++ +A+ AGI+ V YRRVPC+ G I F + N F YF VL+ G GD+ V + G TPM Sbjct: 143 GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPF-YFE-VLIEFEDGDGDLNAVDLMEAGCGWTPM 235
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2) HSP 1 Score: 58.151 bits (139), Expect = 2.526e-12 Identity = 25/59 (42.37%), Postives = 37/59 (62.71%), Query Frame = 3 Query: 168 WQSAHATFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFELKC 341 W+ A AT+YG ++ G+ GGACGYG+L ++S LF +G CGAC+++KC Sbjct: 48 WRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKC 106 HSP 2 Score: 34.2686 bits (77), Expect = 2.526e-12 Identity = 28/84 (33.33%), Postives = 39/84 (46.43%), Query Frame = 1 Query: 439 GGWCNPPRPHFDLAMPMFLKLAQYRA-------GIVPVSYRRVPCRKRG-GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVK 660 GG C R HFDL+ F ++A A G + V YRR C+ G I F +N ++ +LV G GDI + +K Sbjct: 127 GGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIK 210
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 2.528e-12 Identity = 36/108 (33.33%), Postives = 52/108 (48.15%), Query Frame = 3 Query: 78 LFRMLCFFSV--ALSLFATANAKIPGVFAGGPWQSAHATFYGGSDASGTMGGACGYGNLYS-QGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILIT 392 L R + F S+ A +F + A W A AT+YG +D G+ GGACGYG L A+S LF G CGAC++++C D C+ +++T Sbjct: 13 LIRSVLFVSLLSAAFVFDSGEAGAAHRVVDPEWHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRC-LDASICSRRAVTVIVT 119 HSP 2 Score: 33.113 bits (74), Expect = 2.528e-12 Identity = 28/84 (33.33%), Postives = 38/84 (45.24%), Query Frame = 1 Query: 439 GGWCNPPRPHFDLAMPMFLKLA-------QYRAGIVPVSYRRVPCRKRG-GIRFTIN--GFRYFNLVLVTNVAGAGDIVRVSVK 660 GG C R HFDL+ F +LA G + V YRR C+ G I F +N ++ +LV G GDI + +K Sbjct: 124 GGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLK 207
BLAST of FC920808 vs. ExPASy Swiss-Prot
Match: EXB11_MAIZE (Expansin-B11 OS=Zea mays GN=EXPB11 PE=1 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 2.529e-12 Identity = 30/86 (34.88%), Postives = 43/86 (50.00%), Query Frame = 3 Query: 159 GGPWQSAHATFYGGSDASGT--MGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCGGDPQWCNPGNPAILITATNFWP 410 G W A AT+YG +G GG CGY ++ + A + +F +GL CG+CFE+KC P C+ + IT N+ P Sbjct: 46 GSDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKC-DKPAECSGKPVVVYITDMNYEP 130 HSP 2 Score: 35.4242 bits (80), Expect = 2.529e-12 Identity = 26/74 (35.14%), Postives = 37/74 (50.00%), Query Frame = 1 Query: 466 HFDLAMPMFLKLAQY-------RAGIVPVSYRRVPCRKRGGIRFTINGFRYFN--LVLVTNVAGAGDIVRVSVK 660 HFDLA F +A+ +AGI+ + +RRV C+ + F + N +LV V G GDIV V +K Sbjct: 135 HFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYGSKVTFHLEKGCNPNYLALLVKYVDGDGDIVAVDIK 208 The following BLAST results are available for this feature:
BLAST of FC920808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920808 ID=FC920808; Name=FC920808; organism=Citrus clementina; type=EST; length=676bpback to top |