FC920810
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.376e-53 Identity = 102/202 (50.50%), Postives = 127/202 (62.87%), Query Frame = 2 Query: 104 SAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPAS-DYCYRYC--PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEW 697 SA CG G G+ G + I+SR +F+ +L +RND CPA FYTYDAF+ AA AFP F +G + KRE+AAF AQT ETTGGW AP G YAWGYC+ + A DYC + PC +YYGRGPIQL++N NY G+A+G DLL +PDL+A+D +SF +A WFWMT Q PKPSCH V +W Sbjct: 61 SAAGCGGG----GPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQW 258
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.004e-53 Identity = 96/174 (55.17%), Postives = 123/174 (70.69%), Query Frame = 2 Query: 176 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEW 697 +G II+R MFE +L +R D C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF QT ETTGGW AP G +AWGYC + +++ P YYGRGPIQLT NY G+ALG+DL+NNPDL+++DPV++F++AIWFWMTAQ PKPSCH+VI ++W Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEIT-------------PSDPPYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMTAQSPKPSCHDVITNQW 186
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.390e-52 Identity = 100/182 (54.95%), Postives = 127/182 (69.78%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEW 697 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ET GG G + GYC++RQ+ + SD +YYGRGPIQLT NY R G+ +GV DL+NNPDL+ATDP++SF++AIWFWMTAQ KPSCH VII +W Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKGG----SAGTFTGGYCFVRQIDQ--SD------------RYYGRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDPIISFRTAIWFWMTAQDNKPSCHNVIIGQW 184
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 2.870e-51 Identity = 98/182 (53.85%), Postives = 126/182 (69.23%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEW 697 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ET GG G + GYC+++Q+ + SD +YYGRGPIQLT NY R G+ +GV +L+NNPDL+ATDP++SFK+AIWFWMT Q KPSCH VII +W Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQ--SD------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQW 184
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.860e-50 Identity = 96/180 (53.33%), Postives = 126/180 (70.00%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEW 697 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ETTGG A G +A GYC++R+ ++ S +YGRGPIQLT NY G+A+G DL+NNPDL+ATD +SFK+AIWFWMTAQ KPSCH+VI +W Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGSG-------------FYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQW 178
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 6.615e-48 Identity = 94/195 (48.21%), Postives = 126/195 (64.62%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNET-MRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEW 697 C + + +G G +G +I++ +F +LP R++ +CPARGFYTYDAFI AA +FPAFG SG + +RE+AAFF QT ETTGG + ++ WGYC+ ++++ S YYGRGPIQLT NY G ALG+DL+ NPDL++TD V+SFK+AIWFWMTAQ KPSCH+VI+ W Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSP------------PYYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRW 193
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.925e-47 Identity = 94/180 (52.22%), Postives = 120/180 (66.67%), Query Frame = 2 Query: 158 GTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEW 697 GT +G I++ ++F+ +L RND RC A FYTYDAFI AA +FP FG +G++T RK+EIAAFF QT ETTGG +P G YA GYC++R+ ++ + Y YGRGPIQLT NY G+A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPSCH+VI W Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGTL-SPDGPYAGGYCFLREGNQMGNGY-------------YGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRW 185
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.288e-47 Identity = 94/174 (54.02%), Postives = 117/174 (67.24%), Query Frame = 2 Query: 176 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEW 697 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG SG++T R++EIAAFF QT ETTGG A + GYC++RQ SD +YYGRGPIQLT NY + G A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ--NDQSD------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSW 184
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.288e-47 Identity = 85/186 (45.70%), Postives = 120/186 (64.52%), Query Frame = 2 Query: 152 GHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWK 700 G+ + I+S +++ L +++D CPARGFYTY +F+ AA FP F +G RKRE+AAF AQ ETTGGW AP G YAWG CY +++ P S YC + PC Y+GRGPIQ++WN NY G+ALG D L NP+++A ++F++A+WFWMT + KPSCH+V++ E++ Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEIN-PQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYR 225
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.600e-47 Identity = 93/174 (53.45%), Postives = 118/174 (67.82%), Query Frame = 2 Query: 176 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEW 697 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FP FG +G++T R++EIAAFF QT ETTGG A + GYC++RQ SD +YYGRGPIQLT NY + G A+G +L+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQ--NDQSD------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRW 184 The following BLAST results are available for this feature:
BLAST of FC920810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920810 ID=FC920810; Name=FC920810; organism=Citrus clementina; type=EST; length=700bpback to top |