FC920810
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.073e-45 Identity = 91/193 (47.15%), Postives = 110/193 (56.99%), Query Frame = 2 Query: 119 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEW 697 G G G G G G L II MF+D+L YRND +CPA GFYTY+AFI AAK FP FGN+G++ MRKREIAAF QT ET G WP A G +Y WGYC++ N NY CG+ L + LL P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM---------------------------------NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESW 225
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.073e-45 Identity = 86/172 (50.00%), Postives = 111/172 (64.53%), Query Frame = 2 Query: 191 SREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC--YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEW 697 + MFE +LP RN+ CP +GFYTYDA+ A + +P FG +G++ RKRE+AAFFAQT ET+G + WGYC + +++ P SDYC P YYGRGP+QL WN NY CG LG +LL+ P+ +ATDPVLSF++A+WFWM PSCHEVI EW Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELN-PNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEW 238
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45 Identity = 88/182 (48.35%), Postives = 119/182 (65.38%), Query Frame = 2 Query: 167 GGELG--KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEW 697 GG G +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT T+ GG Y+WGYCY ++V SD+C PC Y+ RGP+Q+ +N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQW 265
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45 Identity = 88/182 (48.35%), Postives = 119/182 (65.38%), Query Frame = 2 Query: 167 GGELG--KIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC--PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVIIDEW 697 GG G +++ + FE +LP+R+D CPARGFY Y AF+ AA AFPAF +G+ RKRE+AAF AQT T+ GG Y+WGYCY ++V SD+C PC Y+ RGP+Q+ +N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ +W Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQW 265
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.061e-41 Identity = 86/174 (49.43%), Postives = 108/174 (62.07%), Query Frame = 2 Query: 176 LGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEW 697 + +IS +FE +L +R GFYTYDAFI AAK+FPAF +G+ +RKRE+AAF AQT ETTGGWP AP G Y G SDY +GRGPIQ+++N NY G+A+GVDLL NPDL+ +D + FK+A+WFWMT Q PKPS H+VI W Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG---------STSDY-------------FGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRW 144
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 7.331e-39 Identity = 75/182 (41.21%), Postives = 114/182 (62.64%), Query Frame = 2 Query: 149 TGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRY-CPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIID 691 +G+ T +++ +F+ + +R D CP++GFY+Y +F+ AA++FPAFG G+ RKRE+AAF A T+G D +AWG C+I + +D+C PC +Y RGPIQLT N NY G+A+G DL+ NPDL+ DP++SFK+A+WFWM+ KPSCH+++++ Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLN 299
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.597e-31 Identity = 70/179 (39.11%), Postives = 101/179 (56.42%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCYRYC---PCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFW 643 CG+G G D T+ + I++ E F L+ +D C A+GFYT DAF+ AA +P+FG +G+ KREIAAFFA ET +CYI ++ P+ +YC PC YYGRGP+Q++WN NY G+++G D L +PD +A PVL+F++A+W+W Sbjct: 49 CGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADD-GCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.413e-28 Identity = 68/189 (35.98%), Postives = 102/189 (53.97%), Query Frame = 2 Query: 116 CGSGVVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYC---YRYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPP 661 CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA FA ET +CYI +++ + DYC R PC Y+GRGPIQL+WN NY CG++L ++LL P+L++++P ++F++ +WFWM + P Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGG-GCAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27 Identity = 67/180 (37.22%), Postives = 97/180 (53.89%), Query Frame = 2 Query: 116 CGSGVVCGER-DTGHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASDYCY--RYCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 646 CG G G D G + I+++E F D + + CP + FYT F+EA A+P FG + RKREIAA+FA ET CYI + A++YC + PC +Y+GRGP+QL+WN NY+ G+ L D LN+PD++ DP++SFK+++WFW+ Sbjct: 25 CGPGCQAGPCWDPCEGDGTLTVSDIVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGH-------------LCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI 190
BLAST of FC920810 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.774e-27 Identity = 75/195 (38.46%), Postives = 97/195 (49.74%), Query Frame = 2 Query: 113 NCGSGVVCGERDT-----------GHGTDGGELGKIISREMFEDLLPYRNDVRCPARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGDETTGGWPDAPGGEYAWGYCYIRQVSRPASD-YCYR----YCPCPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 649 NC SG G T G G G + I+S+ F+ ++ + CP + FYT AF+ A P FGN G+ KREIAAFFA ETT C+I + D YC + PC +YYGRGP+QL+WN NY G+A+G D L NP+ +ATD SFK+A+WFWMT Sbjct: 55 NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233 The following BLAST results are available for this feature:
BLAST of FC920810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920810 ID=FC920810; Name=FC920810; organism=Citrus clementina; type=EST; length=700bpback to top |