FC920814

Overview
NameFC920814
Unique NameFC920814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:40..657. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.110e-17
Identity = 54/192 (28.12%), Postives = 99/192 (51.56%), Query Frame = 2
Query:   11 LLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAK 586
            L+ + FF     K  ++ +K+ AP      PLI +L  L G+ P  + L +L+ +YGP+  L  G  P+L+VS  +  KD   T+DR+ A+R +      + Y+    ALAPYG+YWR ++ +    L S+  +   + VR  E+   I+ +         +  ++ +S+++  LT N+  ++  G+++  K
Sbjct:   16 LITILFF-----KKQSRGKKSNAPPSPPRLPLIRNLHQL-GRHPH-RSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIFYNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKI------RISSSLRINLSEILVNLTNNVICRVALGRKYGGK 194          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.755e-17
Identity = 57/199 (28.64%), Postives = 102/199 (51.26%), Query Frame = 2
Query:   11 LLIVYFFWRII-------PKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAK 586
            ++++   W II        K ++ ++  T P P G  PLIG+L  L       + L  L+ +YGP+  L LG+ P+LIVS  ++ ++   T+D+  A R +    + + Y+N   A APYG+YWR ++ +    LLS+  +   + VR  E+ T +       S   FN     +SK++E LT ++  ++  G+++  +
Sbjct:    2 MMMIILLWSIIFMTILFLKKQLSGKKGKTPPSPPGL-PLIGNLHQLGRHTH--RSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEI-TLMMAKIRKSSSLPFN-----VSKVLECLTNDVICRVALGRKYGGE 191          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 4.700e-17
Identity = 60/196 (30.61%), Postives = 99/196 (50.51%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 589
            L+S LI YFF+R      ++  KN  P P    P+IGH+ +L     + +    L+ +YGP++SL  G    ++ S     K    TN+     R +  A K + Y++++ A APYG YWR I+K++  ELL S  +   +H+R  E    ++    L S  A     V I++ + +LT N+   ++ G+   A+D
Sbjct:   11 LVSALICYFFFR---PYFHRYGKNLPPSPFFRLPIIGHMHMLGPL--LHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTYESSL-AFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLR----LLSNRARAFEAVNITEELLKLTNNVISIMMVGEAEEARD 196          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.700e-17
Identity = 56/193 (29.02%), Postives = 99/193 (51.30%), Query Frame = 2
Query:   11 LLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 589
            L I+ FF     KS+ KR  +  P      P+IG+L  L+      + L +L+ ++GP+  LR G+ P+LIVS  ++  D   T+D   A R    +   +         APYG+YWR+++ + T  LLS+  ++  +  R  E+   ++ L     E + + + V +SKLI  +  +I  K++ GK++S ++
Sbjct:   15 LTILLFF-----KSLLKRPNSNLPPSPWRLPVIGNLHQLSLHPH--RALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETL----EEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSGEE 196          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.138e-17
Identity = 55/164 (33.54%), Postives = 88/164 (53.66%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPE--PSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCS 481
            L+S+ +   F  ++ K   K  KN+  +  P G W  P IG +  L G  P  ++L  LA KYGP+  L+LG+   ++V+  ++ K+   T+D   A+R K++A   + YD    A +PYG+YW+ +RKI  TE+LS+  +     +R  EV   I  + S  S
Sbjct:    3 LISIFLFICFLFLLRKW-KKYSKNSQTKKLPPGPWKLPFIGSMHHLAGGRPH-RVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSS 164          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.017e-17
Identity = 58/186 (31.18%), Postives = 103/186 (55.38%), Query Frame = 2
Query:   11 LLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL-YSLCSENAFNPAKVVI---SKLIEQLTFNISLK 556
            ++ V+F    I K+  K +KN  P P    P+IG+L  L G +P  + +  L++KYGP+  L+LGK P ++ S  E VKD   T D+   +RA +     + Y+    A APY +YW+ +RK+   EL ++ R++  +++R  EV +F++ + +S   E   N  + ++     +I ++ F I+L+
Sbjct:    8 VVFVFFASIFIAKNTRKTKKNLPPGPPRL-PIIGNLHQL-GSKPH-RSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFIKHSASLEEIVNLNQTLVKLSGSVICRVGFGINLE 190          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.047e-16
Identity = 59/197 (29.95%), Postives = 97/197 (49.24%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 592
            L   LI +       K I + + N  P P   +P+IG+L  + G+ P  + L  LA++YGP+  L  G  PI +VS  E  ++   T+D    +R K+V  + +  D       PYG  W+  RK A  EL    +++  +H+R  E +  +K L    SE+A + + V +SK +  LT +I  ++  G+ F   D+
Sbjct:    6 LCVFLITFVSLIFFAKKIKRSKWNLPPSPP-KFPVIGNLHQI-GELPH-RSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQL----SESAVDRSPVDLSKSLFWLTASILFRVALGQNFHESDF 195          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.367e-16
Identity = 59/193 (30.57%), Postives = 98/193 (50.78%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIP-KSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 577
            +LSLL    F  +   K  N  +    P P G +P+IG+L  L   +   + L  L+ KYGP+  L+LGK P LI+S  E  K      D    +R  +  G+ + Y+N   + +PY +YW+++RK+ + EL S+++++ ++ ++  EV   I  +    S +  NP  V +SK    LT ++  K   G  F
Sbjct:    6 ILSLLFFIIFLLLAAFKRKNHGKHRRIPSPPG-FPIIGNLHQLGELQH--QSLWKLSKKYGPVMLLKLGKVPTLILSSSETAKQALRDYDLHCCSRPSLAGGRELSYNNLDMSSSPYNEYWKELRKLCSQELFSANKIQSIQPIKDEEVKKVIDSIAE--SSSLKNP--VNLSKTFLALTTSVVCKAAFGVSF 191          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.333e-16
Identity = 63/196 (32.14%), Postives = 96/196 (48.98%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWP-------LIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAG 568
            L S LI+      I   IN+  K   P+P G +P       LIGHL LL G+ P    L ++A +YGP+  ++LG+   +++S  E  K+     D   A R + +  + M YDN     +PY ++WR +RKI  +ELLSS  +     +R  EV   ++ L S         A V +++ IE LT +I  +   G
Sbjct:    6 LWSALIILVVTYTISLLINQWRK---PKPQGKFPPGPPKLPLIGHLHLLWGKLPQ-HALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSSAG------AAVDMTERIETLTCSIICRAAFG 191          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.333e-16
Identity = 57/197 (28.93%), Postives = 96/197 (48.73%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 592
            LL L +++F      K ++  +    P P G  P+IG+L  L   + + +    L+  YGP+  L  G  P+++VS  E  ++   T+D    TR K+ A K   Y+      A YG  WR++RK+A  EL SS +L+  +++R  E +  +  L    S++A     V + K +   T +I  +L  G+ F   D+
Sbjct:   10 LLPLFLIFF------KKLSPSKGKLPPGPLGL-PIIGNLHQLG--KSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFAQYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKL----SKSAETRTMVDLRKALFSYTASIVCRLAFGQNFHECDF 193          
The following BLAST results are available for this feature:
BLAST of FC920814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C71AO_ARATH2.110e-1728.13Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH2.755e-1728.64Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C93B1_GLYEC4.700e-1730.61Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71AG_ARATH4.700e-1729.02Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71D6_SOLCH6.138e-1733.54Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BD_ARATH8.017e-1731.18Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71BJ_ARATH1.047e-1629.95Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71BQ_ARATH1.367e-1630.57Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]
C71DF_MENPI2.333e-1632.14Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71BM_ARATH2.333e-1628.93Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32013D04EF RVDevelop1 Citrus clementina cDNA clone C32013D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920814 ID=FC920814; Name=FC920814; organism=Citrus clementina; type=EST; length=618bp
GCTCTTATCTCTGCTAATTGTCTATTTTTTTTGGAGAATCATACCCAAAT
CTATAAACAAAAGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGG
CCACTCATCGGCCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAA
AATACTTGGAGCATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGAC
TTGGCAAGCATCCCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGAT
TGCTTCACTACCAATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGC
AGGCAAGTATATGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACG
GTCAGTACTGGCGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCA
AGTCACCGGCTTGAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACAC
TTTCATCAAAGATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTG
CGAAGGTGGTGATCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGC
CTGAAACTGATAGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACA
AGGCAGCGAGGCTTGGCG
back to top