FC920814

Overview
NameFC920814
Unique NameFC920814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:40..657. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16
Identity = 58/194 (29.90%), Postives = 96/194 (49.48%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAK--VVISKLIEQLTFNISLKLIAGK 571
            L+SLL +     ++ +  + +++     P G W  PL+G L  L    P    L  LA KYGP+  LR+G+   ++VS     ++     D + A+R  ++  +   YDN     APYG YWR +RK+ T ELLS+  +  L  VR  E  T ++++ +  S +     K  V +++L+   T  I+ K   G+
Sbjct:   36 LVSLLTLPILLALLTRKSSSKKRR----PPGPWNLPLVGGLLHLLRSHPQVA-LRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFAPYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIKAASSGHGGGGGKKPVTLARLLTTCTNTITAKAAFGQ 224          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16
Identity = 55/192 (28.65%), Postives = 93/192 (48.44%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 577
            L++LL    F   + K        T P      P++G+L  L G  P  + L +L+ +YGP+  L  G  P+L+ S  E  ++     D   + R  +   + + YDN   A APYG+YWR IR I   +LLS+ R++  + VR  E    ++ +  L  +     A V ++ L+  LT ++  ++  GK++
Sbjct:    2 LIALLCTLPFLFFLKKWRRSYSGKTPPPSPPKLPVLGNLHQL-GTFPH-RSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRVQSFRRVREEETSIMVEKIMQL--QKTTPTAAVNLTDLLTCLTNDVFCRIALGKKY 189          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.046e-16
Identity = 60/205 (29.27%), Postives = 99/205 (48.29%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGA-WPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEA 613
            LL LL+++ F  I       + +N    PS    P+IG+L  L G  P  + L  L+ KYGP+  L LG  P+++ S  +  +D   T+D + ATR K      + Y +     +P+G+YW  +R I    LLS+ R++  + VR  E    I+ +   C  +  N     + + +  LT NI+ ++  G+ +   D  E G +A
Sbjct:   10 LLILLLLFIFLLIHHCFTTSKTQNMFLPPSPRKLPIIGNLHQL-GSHPH-RSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDASVIN-----LGEHLCFLTNNITSRVALGRTY---DERESGIDA 204          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.196e-16
Identity = 58/183 (31.69%), Postives = 94/183 (51.37%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKRE-KNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNI 547
            LLSL+ V      +    N+R  + T P P G  P+IG+L  L G+ P  + L  L+ KYGP+  L+LG+ P +IVS  E  K     +D    +R      + + Y+    A +PY  YW+++RK+A  EL SS ++  ++ ++  EV    K L    SE+A     + ++K +  LT ++
Sbjct:    6 LLSLIFVICILVAVFNHKNRRNYQRTPPSPPGC-PIIGNLHQL-GELPH-QSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEV----KKLIDSISESAAQKTPINLNKTLLALTVSV 181          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.864e-16
Identity = 54/164 (32.93%), Postives = 85/164 (51.83%), Query Frame = 2
Query:  101 PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 592
            P++G+L LL G  P  K L  LA +YGP+  LRLG  P ++VS  E  ++    +D    +R      K + YD      APYG+YWR++RK+   ELLS  R++   + R  E+D  + DL       A + A +V++  +  LT  I   +  G  +++K +
Sbjct:   63 PILGNLHLL-GPLPH-KNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADL----DRAAASKASIVLNDHVFALTDGIIGTVAFGNIYASKQF 220          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.864e-16
Identity = 58/204 (28.43%), Postives = 99/204 (48.53%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS-AKDYEEQGSE 610
            LL L + + F  I  K + + ++N  P P+   P++G+L  L G    C  L  L+ K+GP+  L+LG  P++++S  E  ++   T+D    TR    A +    +N    L  Y   WR++RK+A  E  S  +++  ++VR  E    +K L  L    A   + V +SK +  L  +   + + G+ FS  K + E+  E
Sbjct:    8 LLLLSLPFLFTLIYTKKMKESKRNLPPGPAKL-PIVGNLHQLQGMVHRC--LHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDL----ALKQSPVDLSKTLFCLAASTVFRPVFGQSFSDNKHFSEEKIE 204          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.512e-15
Identity = 58/202 (28.71%), Postives = 100/202 (49.50%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGS 607
            LL LL+   F R   KS + + K     P    P+IG+L  LNG    C +   L   +GP+  L+LG  P++++S  +  ++   T+D    +R + +A K + Y+      APYG+ WR +RK+A  EL S  +    +++R  E D  +K L    SE +   + V + K +  L+ +I  +L  G+     ++ ++ S
Sbjct:   11 LLLLLVTIIFTR---KSQSSKLKLPPGPPK--LPIIGNLHYLNGLPHKCLL--NLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKL----SEASEKQSPVNLKKALFTLSASIVCRLAFGQNLHESEFIDEDS 201          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.512e-15
Identity = 58/197 (29.44%), Postives = 99/197 (50.25%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 592
            L++L  + FF     K I   + N  P P   +P+IG+L  + G+ P  + L  LA++YGP+  L  G  P+ +VS  E  ++   T+D    +R K+V  + +  +       PYG  W+  RK A  EL    +++  +H+R  E +  +K L    SE+A N + V +SK +  LT +I  ++  G+ F   ++
Sbjct:   10 LITLASLIFF----AKKIKHLKWNLPPSPP-KFPVIGNLHQI-GELPH-RSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQL----SESAVNRSPVDLSKSLFWLTASIFFRVALGQNFHESNF 195          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.512e-15
Identity = 55/193 (28.50%), Postives = 93/193 (48.19%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 580
            L+ L +   F      + +   K   P P    P+IG+L  L G  P  + L  L+ KYGP+  L LG  P+++ S  E V+D   TND + + R K      + Y +   + +P+G+YWR IR I    LLS+ R++  +  R  E    I+ L  + + ++   +   +  L   L +NI  ++  GK+++
Sbjct:    1 LVPLFVFILFLHKCFFTTSNNNKKLPPSPRKL-PIIGNLHQL-GLHPH-RSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSS---SATDLRDLFCWLAYNIINRVALGKKYN 187          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.975e-15
Identity = 50/159 (31.45%), Postives = 87/159 (54.72%), Query Frame = 2
Query:  101 PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR-AKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 574
            P++G+   L+G      IL  LA KYGP+  L++G+   ++ S  +I ++ F T+D + A R + + + K + YD +   ++PYG YWR +RKI+  ELLS   ++  + +R  EV  FIK + S          ++ +SK I  L + I+ +   G++
Sbjct:   34 PILGNAHQLSGGHTH-HILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSK------EGTRINLSKEISLLIYGITTRAAFGEK 185          
The following BLAST results are available for this feature:
BLAST of FC920814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C99A2_ORYSJ3.046e-1629.90Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]
C71A6_NEPRA3.046e-1628.65Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71A4_SOLME3.046e-1629.27Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71BV_ARATH5.196e-1631.69Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71E1_SORBI8.864e-1632.934-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BP_ARATH8.864e-1628.43Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH1.512e-1528.71Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH1.512e-1529.44Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71A3_SOLME1.512e-1528.50Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71DC_CATRO1.975e-1531.45Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]

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Properties
Property NameValue
Genbank descriptionC32013D04EF RVDevelop1 Citrus clementina cDNA clone C32013D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920814 ID=FC920814; Name=FC920814; organism=Citrus clementina; type=EST; length=618bp
GCTCTTATCTCTGCTAATTGTCTATTTTTTTTGGAGAATCATACCCAAAT
CTATAAACAAAAGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGG
CCACTCATCGGCCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAA
AATACTTGGAGCATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGAC
TTGGCAAGCATCCCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGAT
TGCTTCACTACCAATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGC
AGGCAAGTATATGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACG
GTCAGTACTGGCGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCA
AGTCACCGGCTTGAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACAC
TTTCATCAAAGATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTG
CGAAGGTGGTGATCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGC
CTGAAACTGATAGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACA
AGGCAGCGAGGCTTGGCG
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