FC920814

Overview
NameFC920814
Unique NameFC920814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:40..657. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.975e-15
Identity = 59/199 (29.65%), Postives = 100/199 (50.25%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREK-NTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 589
            L++L +      ++ KSI KR   N    P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ P+LIVS  ++  D   T D I A R K      +       A APYG+YW+ ++ I    LLS+  +   K +R  E+   I+ + +  + +   P+ V +S+L   LT +I  +   G+++S+K+
Sbjct:    5 LVTLCLTTLLALLLLKSILKRTTTNNLNLPPSPWRLPVIGNLHQLSLNTH--RSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVEN--ASSCSPPSPVNLSQLFMTLTNDIICRAALGRKYSSKE 199          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15
Identity = 55/197 (27.92%), Postives = 95/197 (48.22%), Query Frame = 2
Query:   38 IIPKSI---NKREKNTAPEPSGAWPLIGHLPLLNGQEPI-CKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF--SAKDYEEQGSE 610
            +IP S+   N+      P     WP++G+L  +   +PI C+     A++YGP+ S+  G    ++VS  E+ K+    ND+ LA R +  + +    +      A YG ++  +RK+   EL +  RLE L+ +R  EV   ++ +Y   +        +V+   +  + FN   +L  GKRF  +  D +EQG E
Sbjct:   15 LIPLSLALLNRLRLGRLPPGPRPWPVLGNLRQI---KPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDIDEQGRE 208          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15
Identity = 52/156 (33.33%), Postives = 82/156 (52.56%), Query Frame = 2
Query:    5 LSLLIVYFFWRIIPKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL 466
            +S L +   W+   K +N  +  T   P G W  P IG +  L G  P  ++L  LA+KYGP+  L+LG+   ++V+  E+ K    T+D   A+R K++A   + Y+    A +PYG YWR +RKI   E+LS+  +     +R+ EV   I  +
Sbjct:   10 ISFLFLLRKWK---KYLNNSQ--TKKLPPGPWKLPFIGGMHHLAGGLPH-RVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSI 159          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15
Identity = 57/197 (28.93%), Postives = 96/197 (48.73%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 592
            LL  L +  F +++P      +    P P G  P+IG+L  L   + + K    ++ +YGP+  LRLG  P+++VS  E  ++   T+D    TR K  A     Y+      AP+G  WR++RKI T EL S  +L+  +++R  E +  +K +     E     + V + K++   T +I  +L  G+ F   D+
Sbjct:    9 LLLPLSLILFKKLLPS-----KGKLPPGPIGL-PIIGNLHQLG--KLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDET--QNSSVDLRKVLFSFTASIICRLAFGQNFHQCDF 195          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15
Identity = 56/197 (28.43%), Postives = 97/197 (49.24%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDY 592
            LL  L + F+ R++P       K   P    + P+IG+L  L   + + +    L+ +YGP+  LR G  P+++ S  E  ++   T+D    TR K+ A     Y+      A YG+ WR++RK+A  EL SS +L+  +++R  E +  +K +    +E+A     V + K +   T +I  +L  G+ F   D+
Sbjct:    9 LLLPLFLVFYKRLLPS------KGKLPPGPISLPIIGNLHQLG--KSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKV----TESAQTQTLVDLRKALFSYTASIVCRLAFGQNFHECDF 193          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15
Identity = 55/200 (27.50%), Postives = 105/200 (52.50%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS-AKDYEE 598
            +L ++ + FF +   K++NK     +P      PLIG+L  L+ Q P  + L  L+ +YGP+  L  G  P+++ S  E  +D   T+DR+ A+R +    + + Y +   A APYG+YWR ++ ++   LLS+  +   + VR  E+   ++ +    S+       V +SK++  LT ++  ++  G+++    D++E
Sbjct:    9 ILFIITILFFKK--HKTVNKIINFPSPP---RLPLIGNLHQLS-QHPH-RSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSK------PVNLSKILSSLTNDVICRVALGRKYGVGTDFKE 195          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15
Identity = 60/199 (30.15%), Postives = 102/199 (51.26%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKI-VAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL-YSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAK 586
            LL+LL+     R   K+ N         P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ P+LIVS  ++  D   T+D + A R K  V  K +     + A APYG+YWR ++ I    LL++  +   + +R  E+   I+ L  + CS    +P+ V +S+++  LT +I  ++  G+++S K
Sbjct:   13 LLALLLKSILKRTATKNFNL--------PPSPWRLPVIGNLHQLSLHTH--RSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDV-AFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSS---SPSPVNLSQILMTLTNDIICRVALGRKYSGK 197          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15
Identity = 55/187 (29.41%), Postives = 89/187 (47.59%), Query Frame = 2
Query:   14 LIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 574
            L  Y F R + K       +  P P+G WP+IG LPLL     +   L  +A KYGPI  L+LG    ++ S  +  +    T+D   + R       Y+ Y+      A YG  W+ +RK+ +  +L    LE   HV+ SEV   +K++Y   S++   P  VV+ +++     N+  ++I  +R
Sbjct:   20 LATYSFIRFLFKP--SHHHHLPPGPTG-WPIIGALPLLGTMPHVS--LADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEMYEQSSKSV--PVPVVVPEMLTYAMANMIGRIILSRR 199          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15
Identity = 54/184 (29.35%), Postives = 98/184 (53.26%), Query Frame = 2
Query:   17 IVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIK-DLYSLCSENAFNPAKVVI---SKLIEQLTFNISLK 556
            +V F   +I KS  K +KN  P P    P+IG+L  L G++P  + +  L+  YGP+ SL+LG    ++ +  E V+D   T D    +R  +     + Y+      +PY +YWR +RK+   EL ++ R++  +H+R  EV +F++ +  +  SE   N ++ ++     +I ++ F I+L+
Sbjct:   10 LVIFASLLIAKSKRKPKKNLPPGPPRL-PIIGNLHQL-GEKPH-RAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVICRIGFGINLE 190          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15
Identity = 55/189 (29.10%), Postives = 90/189 (47.62%), Query Frame = 2
Query:   50 SINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF--SAKDYEEQGSE 610
            ++ +R +   P     WP++G+L  +      C      A  YGPI S+  G    +IVS  E+ K+    +D++LA R +  +      D      A YG ++  +RK+ T EL S  RLE L+ +R  EV + +  +Y+ C+        +++ K +  + FN   +L  GKRF  S    +EQG E
Sbjct:   19 TLYQRLRFKLPPGPRPWPVVGNLYDIKPVRFRC--FAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDEQGVE 205          
The following BLAST results are available for this feature:
BLAST of FC920814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C71AJ_ARATH1.975e-1529.65Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI2.579e-1527.92Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71D7_SOLCH2.579e-1533.33Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BZ_ARATH2.579e-1528.93Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BL_ARATH2.579e-1528.43Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH3.368e-1527.50Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH3.368e-1530.15Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C75A6_CAMME4.399e-1529.41Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]
C71B1_THLAR4.399e-1529.35Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C98A2_SOYBN7.503e-1529.10Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32013D04EF RVDevelop1 Citrus clementina cDNA clone C32013D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920814 ID=FC920814; Name=FC920814; organism=Citrus clementina; type=EST; length=618bp
GCTCTTATCTCTGCTAATTGTCTATTTTTTTTGGAGAATCATACCCAAAT
CTATAAACAAAAGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGG
CCACTCATCGGCCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAA
AATACTTGGAGCATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGAC
TTGGCAAGCATCCCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGAT
TGCTTCACTACCAATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGC
AGGCAAGTATATGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACG
GTCAGTACTGGCGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCA
AGTCACCGGCTTGAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACAC
TTTCATCAAAGATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTG
CGAAGGTGGTGATCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGC
CTGAAACTGATAGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACA
AGGCAGCGAGGCTTGGCG
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