FC920814

Overview
NameFC920814
Unique NameFC920814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:40..657. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15
Identity = 59/198 (29.80%), Postives = 96/198 (48.48%), Query Frame = 2
Query:   11 LLIVYFFWRIIPKSINKRE--KNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 598
            +L+  F   ++ K   K E  +N  P P    PL+GHL LL G+ P    +  +A KYGP+  ++LG+   +++S  E  K+     D   A R + +  + M YDN     +PY  +WR +RKI  +ELLS+  +     +R  E+   ++ L S   E       V +++ I  LT +I  +   G   +  D+EE
Sbjct:   11 ILVATFVASLLIKQWRKSESRQNLPPGPPKL-PLVGHLHLLWGKLPQ-HAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGET------VDMTERIATLTCSIICRAAFGAIIN--DHEE 198          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.503e-15
Identity = 59/198 (29.80%), Postives = 96/198 (48.48%), Query Frame = 2
Query:   11 LLIVYFFWRIIPKSINKRE--KNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 598
            +L+  F   ++ K   K E  +N  P P    PL+GHL LL G+ P    +  +A KYGP+  ++LG+   +++S  E  K+     D   A R + +  + M YDN     +PY  +WR +RKI  +ELLS+  +     +R  E+   ++ L S   E       V +++ I  LT +I  +   G   +  D+EE
Sbjct:   11 ILVATFVASLLIKQWRKSESQQNLPPGPPKL-PLVGHLHLLWGKLPQ-HAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSSAGET------VDMTERIATLTCSIICRAAFGAIIN--DHEE 198          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15
Identity = 62/201 (30.85%), Postives = 99/201 (49.25%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKR--EKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEE 598
            ++ L++ Y    +I K   K   ++N  P P    PLIGHL LL G+ P    L ++A +YGP+  ++LG+   +++S  E  K+     D   A R + +  K M YDN     +PY  +WR +RKI  +ELLS+  +     +R  EV   +  L S    +A     V +++ I  LT +I  +   G     +D+EE
Sbjct:    9 IIILVVTYTISLLIIKQWRKPKPQENLPPGPPKL-PLIGHLHLLWGKLPQ-HALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRS----SAAAGEAVDLTERIATLTCSIICRAAFGS--VIRDHEE 201          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.800e-15
Identity = 51/192 (26.56%), Postives = 93/192 (48.44%), Query Frame = 2
Query:   38 IIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEA 613
            I+ K +   +    P P    P+IG+L  L G    C     L+ K+GP+  L  G  P++++S  E  ++   T D    +R + VA + + Y+      APYG+ W+ +RK+   ELL++ + +  +++R  E D  IK L    +E+A   + V + K +  L  +I  +L  G      ++ ++ + A
Sbjct:   20 ILSKRLKPSKWKLPPGPK-TLPIIGNLHNLTGLPHTC--FRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKL----TESALKKSPVNLKKTLFTLVASIVCRLAFGVNIHKCEFVDEDNVA 204          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.672e-14
Identity = 52/189 (27.51%), Postives = 94/189 (49.74%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSE----NAFNPAKVVISKLIEQLTFNISLK 556
            LL L++++       K++   +    P P    P+IG+L       P  +    L++KYGPI  LR G  P++++S  E  ++   T+D    +R + V  + + Y+      APYG+ WR +RK++  EL SS +L+  +++R  E D  +K L  L S     N       ++  ++ ++ F I+L+
Sbjct:   10 LLPLILIFL------KNLKPSKWKLPPGPKKL-PIIGNLHQRRELHP--RNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINLR 189          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.183e-14
Identity = 60/208 (28.85%), Postives = 99/208 (47.60%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGA--WPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAK---DYEEQGSE 610
            +L  +I  F  + I +S   R++   P P G   WP+IG+L  L G +P  +   A+A  YGP+  L++G   +++ +   +      T+D   ++R      ++M Y+      APYG  WR +RKI +  L S+  L+  +HVR  EV T  + L S           V + +L+   T N   +++ GKR  A    D + Q +E
Sbjct:    7 ILYTVIFSFLLQFILRSFF-RKRYPLPLPPGPKPWPIIGNLVHL-GPKPH-QSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTLTRALASA------GQKPVKLGQLLNVCTTNALARVMLGKRVFADGSGDVDPQAAE 205          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.352e-14
Identity = 57/183 (31.15%), Postives = 92/183 (50.27%), Query Frame = 2
Query:   20 VYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDT---FIKDLYSLCSENAFNPAKVVIS-KLIEQLTFNISLK 556
            V+F   II ++  K +KN  P P    P+IG+L  L G +P   +   L++KYGP+ +LR G    ++ S  E VK+   T D    +R  +     + Y+       PY +YWR++RK+   EL ++ R++  +H R  EV +   FI    SL      N   + +S  +I ++ F I+LK
Sbjct:   11 VFFSTIIIVRNTRKTKKNLPPGPPRL-PIIGNLHQL-GSKPHSSMF-KLSEKYGPLMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFITQAASLEKPVNLNTKLMKLSGSVICRVVFGINLK 190          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14
Identity = 55/199 (27.64%), Postives = 96/199 (48.24%), Query Frame = 2
Query:   14 LIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSE 610
            +IVY   + +  + + R +   P P G WP+IG LPLL G   +   L  +A KYGPI  L++G   +++ S     K    T D   + R       +M Y+      APYG  W+ +RK++   +L    LE   +VR +E+   +K ++    + +    ++V++   + LTF ++  +I     S + + E+G E
Sbjct:   16 IIVYIIIQKLIATGSWRRRRLPPGPEG-WPVIGALPLLGGMPHVA--LAKMAKKYGPIMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMF----DASHVGERIVVA---DMLTFAMA-NMIGQVMLSKRVFVEKGKE 203          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14
Identity = 51/162 (31.48%), Postives = 79/162 (48.77%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSIN-----KREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYS 472
            LLS +I+     I+   IN     K ++N  P P    P+IGHL  L G  P   +  ++A KYGP+  ++LG+   +++S  E  K      D   A R   +  + M YD      +PY  +WR +R+I  TELLS   +    ++R  E++  I+ L S
Sbjct:    5 LLSAIIILVATYIVSLLINQWRKSKSQQNLPPSPPKL-PVIGHLHFLWGGLPQ-HVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGS 164          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71DI_MENGR (Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14
Identity = 51/162 (31.48%), Postives = 79/162 (48.77%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSIN-----KREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYS 472
            LLS +I+     I+   IN     K ++N  P P    P+IGHL  L G  P   +  ++A KYGP+  ++LG+   +++S  E  K      D   A R   +  + M YD      +PY  +WR +R+I  TELLS   +    ++R  E++  I+ L S
Sbjct:    5 LLSAIIILVATYIVSLLINQWRKSKSQQNLPPSPPKL-PVIGHLHFLWGGLPQ-HVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGS 164          
The following BLAST results are available for this feature:
BLAST of FC920814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C7D95_MENSP7.503e-1529.80Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR7.503e-1529.80Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71DD_MENPI9.800e-1530.85Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71B7_ARATH9.800e-1526.56Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]
C71BS_ARATH1.672e-1427.51Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
F3PH_PETHY2.183e-1428.85Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C71BB_ARATH6.352e-1431.15Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]
C75A2_SOLME8.296e-1427.64Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71DI_MENSP8.296e-1431.48Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]
C71DI_MENGR8.296e-1431.48Cytochrome P450 71D18 OS=Mentha gracilis GN=CYP71D... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32013D04EF RVDevelop1 Citrus clementina cDNA clone C32013D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920814 ID=FC920814; Name=FC920814; organism=Citrus clementina; type=EST; length=618bp
GCTCTTATCTCTGCTAATTGTCTATTTTTTTTGGAGAATCATACCCAAAT
CTATAAACAAAAGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGG
CCACTCATCGGCCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAA
AATACTTGGAGCATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGAC
TTGGCAAGCATCCCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGAT
TGCTTCACTACCAATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGC
AGGCAAGTATATGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACG
GTCAGTACTGGCGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCA
AGTCACCGGCTTGAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACAC
TTTCATCAAAGATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTG
CGAAGGTGGTGATCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGC
CTGAAACTGATAGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACA
AGGCAGCGAGGCTTGGCG
back to top