FC920814

Overview
NameFC920814
Unique NameFC920814
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length618
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14162 contig Ccv1_Contig14162:40..657. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14
Identity = 57/183 (31.15%), Postives = 93/183 (50.82%), Query Frame = 2
Query:   20 VYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDT---FIKDLYSLCSENAFNPAKVVIS-KLIEQLTFNISLK 556
            V+F   II + I K +KN  P P    P+IG+L  L G +P  + +  L++ YGP+ SL+ G    ++ S  E VK+   T D    +R  +     + Y+      +PY +YWR++RK+   EL ++ R++  +H R  EV     FIK   SL      N   + +S  +I ++ F I+L+
Sbjct:   11 VFFSSMIIVRIIRKTKKNLPPGPPRL-PIIGNLHQL-GSKPH-RSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSRPNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRKEEVAALVDFIKQAASLEKPVNLNKKLMKLSGSVICRVAFGINLQ 190          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14
Identity = 57/197 (28.93%), Postives = 99/197 (50.25%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR--AKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL-YSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 577
            ++SL +      ++ K   KR       P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ PIL+VS  E   +   T+D   A R  +K V G   G  + +F   PYG+YWR ++ +    LL++  +   + VR  EV+  ++ L  + CS +A N     +S+L   LT +++ ++  GK++
Sbjct:    6 MVSLCLTTLLTLLLLKKFLKRTAKKVNLPPSPWRIPVIGNLHQLSLHPH--RSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFG--PYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAEN-----LSELFVTLTSDVTSRVSLGKKY 193          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13
Identity = 57/187 (30.48%), Postives = 90/187 (48.13%), Query Frame = 2
Query:    8 SLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAG 568
            SL+IV   +  I     +R     P P G WP+IG++ +++  +   + L  LA KYG +  LR+G   +  VS  E+ +      D + + R   +A  Y+ YD A  A A YG +WR +RK+   ++ S  R E    VR  EVD  ++ +    S N   P  + + + I  LT NI+ +   G
Sbjct:   18 SLVIVVSLFIFISFITRRRRPPYPPGPRG-WPIIGNMLMMD--QLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVR-DEVDKMVRSV----SCNVGKP--INVGEQIFALTRNITYRAAFG 194          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13
Identity = 47/167 (28.14%), Postives = 83/167 (49.70%), Query Frame = 2
Query:  101 PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKDYEEQ 601
            P+IGHL  L       K L  L+ KYGP+  L +   P+++VS   +  + F  +D  +++R      + +   +++F  APYG YW+ ++K+  T+LL    LE  + +R  E++ F + L     + A     V I K   +L+ N   ++  G+ FS +  E +
Sbjct:   47 PIIGHLHHLLSSLAH-KSLQQLSSKYGPLLHLSIFNFPVVLVSSASVAYEIFKAHDLNISSRDNPPINESLLVGSSVFVGAPYGDYWKFMKKLLVTKLLGPQALERSRSIRADELERFYRSLL----DKAMKKESVEIGKEATKLSINSICRMSMGRSFSEESGEAE 208          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13
Identity = 52/184 (28.26%), Postives = 89/184 (48.37%), Query Frame = 2
Query:    5 LSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLK 556
            LSLL +        K   +R     P     +P+IG+L  L G+ P  + L +L+  YGP+  L+LG  P ++VS  E  K     ND    +R  +   K + Y+    A +P+  YW+++R+I   EL S+ R+  ++ ++  EV    + L    +E+A   + V +S+    LT ++  K
Sbjct:    7 LSLLFLCCILLAAFKHKKRRTNQQQPPSPPGFPIIGNLHQL-GELPH-QSLWSLSKTYGPVMLLKLGSVPTVVVSSSETAKQVLKINDLHCCSRPSLAGAKELSYNYLDIAFSPFDDYWKELRRICVQELFSAKRVHSIQPIKEEEV----RKLIVSATESASQKSPVNLSEKFLDLTVSVICK 184          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13
Identity = 55/195 (28.21%), Postives = 93/195 (47.69%), Query Frame = 2
Query:    5 LSLLIVYFFWRII-----PKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKR 574
            +S+L+ +FF  +I      K     ++N  P P    P+IG+L  L G    C  L  L+ K+GP+  LRLG   ++++S  E  ++    +D    TR K  A      D    A APYG+  R++RK++     S+ ++   +++R  E D  +K L     E+A     V +S+ +  L  +I  +   G+R
Sbjct:    1 MSILLYFFFLPVILSLIFMKKFKDSKRNLPPSPPKL-PIIGNLHQLRGLFHRC--LHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKL----KESAKKKNTVDLSQTLFYLVGSIIFRATFGQR 188          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13
Identity = 55/197 (27.92%), Postives = 96/197 (48.73%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR--AKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 580
            ++SL +       + K   KR  N    P   W  PLIG+L  L+      + L +L+ +YGP+  L  G+ PIL+VS  E  ++   T+D   A R  +K V G   G  + +F   PYG+YWR ++ +    LL++  +   + +R  E++  IK L    S ++       +S+L   L  +++ ++  G++ S
Sbjct:    6 MVSLCLTTLITLFLLKQFLKRTANKVNLPPSPWRLPLIGNLHQLSLHPH--RSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFG--PYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSEN----LSELFVTLPSDVTSRIALGRKHS 194          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13
Identity = 55/196 (28.06%), Postives = 97/196 (49.49%), Query Frame = 2
Query:    5 LSLLIVYFFWRIIPKSINKREKNTAPEPSGAW--PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATR--AKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFS 580
            +SL +      ++ +   KR       P   W  P+IG+L  L+      + L +L+ +YGP+  L  G+ PIL+VS  E  ++   T+D   A R  +K V G   G  + +FA  PYG+YWR ++ +    LL++  +E  + VR  EV+  I+ L    S ++       +S+L   L  +++ ++  G++ S
Sbjct:    7 ISLCLTTLITLLLLRRFLKRTATKVNLPPSPWRLPVIGNLHQLSLHPH--RSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFA--PYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSEN----LSELFITLPSDVTSRVALGRKHS 194          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13
Identity = 47/163 (28.83%), Postives = 80/163 (49.08%), Query Frame = 2
Query:  101 PLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRFSAKD 589
            P+IG+L  L G  P  + L  L+ KYGP+  L  G  P+++ S  +  +D   T+D + A+R K      + Y +     +P+G+YWR  + I    LLS+ R++  ++VR  E    I  +   C  +  N  + + S     LT NI  ++  G+ +  K+
Sbjct:   45 PIIGNLHQL-GSLPH-RSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSVINLGEHLCS-----LTNNIISRVALGRTYDEKE 200          
BLAST of FC920814 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13
Identity = 54/192 (28.12%), Postives = 91/192 (47.40%), Query Frame = 2
Query:    2 LLSLLIVYFFWRIIPKSINKREKNTAPEPSGAWPLIGHLPLLNGQEPICKILGALADKYGPIYSLRLGKHPILIVSGWEIVKDCFTTNDRILATRAKIVAGKYMGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVVISKLIEQLTFNISLKLIAGKRF 577
            LL  L + F  +++P      +    P P G  P+IG+L        + K L  ++ +YGP+  L  G  P++IVS  E  ++   T+D    +R K V      Y+      APYG+ WR++RKIA +EL S  +L+  +++R  E    ++ +     E     + V + K+I     +I  +L  G+ F
Sbjct:    9 LLLPLSLIFLKKLLPS-----KGKLPPGPKGL-PIIGNLHQFG--RFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETP--TSSVNLRKVIFTFAASIICRLSFGQNF 190          
The following BLAST results are available for this feature:
BLAST of FC920814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C71BC_ARATH8.296e-1431.15Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH8.296e-1428.93Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH1.084e-1330.48Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C75AK_ARATH1.084e-1328.14Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C71B9_ARATH1.084e-1328.26Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71B3_ARATH1.084e-1328.21Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71AC_ARATH1.415e-1327.92Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH1.848e-1328.06Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71A2_SOLME1.848e-1328.83Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71B5_ARATH2.414e-1328.13Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionC32013D04EF RVDevelop1 Citrus clementina cDNA clone C32013D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920814 ID=FC920814; Name=FC920814; organism=Citrus clementina; type=EST; length=618bp
GCTCTTATCTCTGCTAATTGTCTATTTTTTTTGGAGAATCATACCCAAAT
CTATAAACAAAAGAGAGAAAAATACTGCCCCCGAGCCATCTGGGGCATGG
CCACTCATCGGCCATTTGCCTCTGCTAAATGGCCAAGAACCAATTTGCAA
AATACTTGGAGCATTGGCCGATAAATATGGGCCCATCTATTCTCTTAGAC
TTGGCAAGCATCCCATATTGATTGTGAGCGGTTGGGAAATTGTGAAGGAT
TGCTTCACTACCAATGACAGAATTCTGGCTACAAGGGCAAAAATTGTAGC
AGGCAAGTATATGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACG
GTCAGTACTGGCGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCA
AGTCACCGGCTTGAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACAC
TTTCATCAAAGATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTG
CGAAGGTGGTGATCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGC
CTGAAACTGATAGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACA
AGGCAGCGAGGCTTGGCG
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