FC920815

Overview
NameFC920815
Unique NameFC920815
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:104..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.500e-34
Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            +L G+TSE+ A PN SLR    + +++ +AR+ K C R VSCADIL LAARD+V L+GG  +++PLGR D + + A+ VNLP P  +      DF  KT N  + V L GGHT+G A C
Sbjct:   89 LLAGNTSERTAVPNRSLR--GFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQASDVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGC 205          

HSP 2 Score: 58.9214 bits (141), Expect = 2.500e-34
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY   C  +ESIVR  +Q+ ++     A G++R+HFHDCFV GCDGSV
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSV 88          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.501e-34
Identity = 55/124 (44.35%), Postives = 73/124 (58.87%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 648
            +L+G+ SE+ A PN++  +   + +D ++A V   C  VVSCADIL LAARDSV LSGGP + + LGR+D       +  NLPSPF     I+  F     N  + VALSG HT G A C  F+
Sbjct:   82 LLDGADSEKLAIPNINSAR-GFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFS 204          

HSP 2 Score: 68.9366 bits (167), Expect = 2.501e-34
Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS   Y +SCP L  IVRKQ+  ALK +I +AA LIR+HFHDCFV GCD S+
Sbjct:   30 LSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASL 81          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.501e-34
Identity = 51/131 (38.93%), Postives = 82/131 (62.60%), Query Frame = 1
Query:  280 SVLEGSTS-----EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVV-NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 648
            S+L  +TS     E+ A PNL++R     F+D +++ +  +C  +VSCADI+ LA RDS+   GGP +++P GRRD +   FA  + N+P PF N T ++  F  +  + ++ V LSG HT+G++HC +F+
Sbjct:   75 SILINATSSNQQVEKLAPPNLTVR--GFDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFS 203          

HSP 2 Score: 67.0106 bits (162), Expect = 2.501e-34
Identity = 29/52 (55.77%), Postives = 36/52 (69.23%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L   FYDQ+CP  E IV+  +   +     LAAGLIR+HFHDCFV+GCDGS+
Sbjct:   25 LKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSI 76          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.257e-34
Identity = 53/124 (42.74%), Postives = 74/124 (59.68%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 648
            ++ G  +E+ A  NL LR    + +DD + ++   C  VVSCADILALAARDSV LSGG ++ +P GRRD +    + V NLP+P  +  V    F  K  N ++ V L GGHT+G + C  F+
Sbjct:   84 LISGPATEKTAFANLGLR--GYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDVSNLPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFS 205          

HSP 2 Score: 67.781 bits (164), Expect = 3.257e-34
Identity = 27/48 (56.25%), Postives = 38/48 (79.17%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY ++CP+ ESIVR  +++ +  D  LAA ++R+HFHDCFVQGCDGS+
Sbjct:   36 FYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSI 83          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.526e-34
Identity = 55/124 (44.35%), Postives = 74/124 (59.68%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 648
            +L+G+ SE+ A PN++  +   + +D ++A V   C  VVSCADIL LAARDSV LSGGP + + LGR+D      ++  NLPSPF     I+  F     N  + VALSG HT G A C  F+
Sbjct:   82 LLDGTNSEKLAIPNVNSVR-GFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANNLPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFS 204          

HSP 2 Score: 68.1662 bits (165), Expect = 5.526e-34
Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS   Y +SCP L  IVR Q++ ALK +I +AA LIR+HFHDCFV GCD SV
Sbjct:   30 LSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASV 81          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.184e-34
Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 1
Query:  292 GSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF--TIASIQTRPHT 678
            G  +E++A PN  SLR      +D  +  V + C R VSCADI+A AARDS++L+G  +Y +P GRRD +       V+LP P S    + + F+ K  +  + V LSG HTVG + C +F   + +  T P T
Sbjct:   94 GGQTERDALPNNPSLR--GFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSNATETVDLPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVWNTSTNPAT 225          

HSP 2 Score: 76.6406 bits (187), Expect = 7.184e-34
Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FYD SCP  E++VR+ +  A  KD G+AAGLIR+HFHDCFV+GCDGSV
Sbjct:   39 FYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSV 86          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 7.198e-34
Identity = 55/122 (45.08%), Postives = 77/122 (63.11%), Query Frame = 1
Query:  295 STSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN----LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 648
            ST+E++A PN +LR     FV+ ++A V K C   VSCAD+LAL ARD+V LS GP + +PLGRRD +   ++ N    LP P +N T +   F  K  + ++ V LS GHT+G +HC +FT
Sbjct:   83 STAEKDATPNQTLR--GFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGR--VSIANETDQLPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFT 200          

HSP 2 Score: 65.855 bits (159), Expect = 7.198e-34
Identity = 28/48 (58.33%), Postives = 36/48 (75.00%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY  SCP +E++VRK++  AL     LA  L+R+HFHDCFV+GCDGSV
Sbjct:   28 FYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSV 75          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.221e-33
Identity = 53/123 (43.09%), Postives = 77/123 (62.60%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFA-TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            +L  ++ EQ+  PNL+L       V+ ++A+V   C  +VSCADILA+AARD V   GGP++ + LGRRDS  +FA    +LP P S+   +L+ + +K  N  + VALSG HT+G A C +F
Sbjct:   83 LLNDTSGEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDSTASFAGQTSDLPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSF 205          

HSP 2 Score: 65.4698 bits (158), Expect = 1.221e-33
Identity = 27/56 (48.21%), Postives = 40/56 (71.43%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVF*RD 295
            LS TFYD+SCP   S +R  + +A++++  + A L+R+HFHDCFV+GCD S+   D
Sbjct:   31 LSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLND 86          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.588e-33
Identity = 55/124 (44.35%), Postives = 79/124 (63.71%), Query Frame = 1
Query:  289 EGSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 648
            EG   E+ A PNL SLR    + +D +++ +   C   VSCADILA+AARDSV +SGGP +++ +GR+DS+T    A    LPSP S  + +++ F+    +  + VALSGGHT+G A C +FT
Sbjct:  107 EGLVGEKTAPPNLNSLR--GFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFT 228          

HSP 2 Score: 60.8474 bits (146), Expect = 1.588e-33
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L +  Y  SCP+ ESIV   ++  + +D  +AA L+R+HFHDCFV GCD SV
Sbjct:   50 LDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASV 101          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.698e-33
Identity = 53/119 (44.54%), Postives = 80/119 (67.23%), Query Frame = 1
Query:  298 TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            T EQ A PN +  +  L  +D+++++V   C  VVSCADI+A+AARDSV + GGP++D+ LGRRDSKT +      N+P P S+ + +++ F+ +  + R+ VALSG HT+G A C +F
Sbjct:   87 TGEQTAVPNKNSIR-GLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSF 204          

HSP 2 Score: 60.4622 bits (145), Expect = 2.698e-33
Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS  FY ++CPK+   V+  +Q+A+ K+  + A L+R+ FHDCFV GCD SV
Sbjct:   27 LSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASV 78          
The following BLAST results are available for this feature:
BLAST of FC920815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER69_ARATH2.500e-3447.90Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER59_ARATH2.501e-3444.35Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER39_ARATH2.501e-3438.93Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER2_ARAHY3.257e-3442.74Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PERN_ARMRU5.526e-3444.35Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER1_MAIZE7.184e-3438.81Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER1_ORYSJ7.198e-3445.08Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER66_MAIZE1.221e-3343.09Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER40_ARATH1.588e-3344.35Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER4_VITVI2.698e-3344.54Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]

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Properties
Property NameValue
Genbank descriptionC32013D05EF RVDevelop1 Citrus clementina cDNA clone C32013D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920815 ID=FC920815; Name=FC920815; organism=Citrus clementina; type=EST; length=692bp
GACAACACAAAGCGAGGTAATCCCAATGGCAACTGCTTCAGCTTCTTCTT
TCATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAG
GCACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCA
GAGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCC
TGAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCAC
GATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAAC
ATTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGA
TCCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCC
CTCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAT
CGCCTCTATCCAAACAAGACCCCACACTGGACAAACATTCGC
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