FC920815

Overview
NameFC920815
Unique NameFC920815
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.699e-33
Identity = 49/117 (41.88%), Postives = 77/117 (65.81%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVV--NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            +E++  PN+SL   A   +D+ +  + ++C  +VSCADIL+LAARD+VALSGGP + +P GR+D +    +    LP+P  N + +  +F ++  +  + VALSGGHT+G AHC +F
Sbjct:   84 AEKDGPPNISLH--AFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGRISKAIETRQLPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHCSSF 198          

HSP 2 Score: 63.5438 bits (153), Expect = 2.699e-33
Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 2
Query:  122 KGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            + LS  +YD +CP+ + IV   ++ A+  D  + A L+R+HFHDCFV+GCDGSV
Sbjct:   21 QALSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSV 74          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.513e-33
Identity = 51/115 (44.35%), Postives = 79/115 (68.70%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            +E++A PNL+L+    + VD  +  + ++C  ++SCAD+LAL ARD+VA+ GGP + +PLGRRD   SK    ++NLPSPF++   +  +F  K  NA++ V LSGGHT+G++ C
Sbjct:   86 AERDAVPNLTLK--GYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSC 198          

HSP 2 Score: 58.9214 bits (141), Expect = 3.513e-33
Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L   +Y   CPK E IVR      + +   LAA L+R+HFHDCFV+GCDGSV
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSV 77          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.514e-33
Identity = 53/123 (43.09%), Postives = 75/123 (60.98%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF--ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            +L  ++ EQ   PNL+L   A   V+ ++A+V   C  VVSCADILA+AARD V   GGP++ + LGRRDS     +   +LP P S+   +L  + +K  +A + VALSG HT+G A C +F
Sbjct:   83 LLNDTSGEQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDSTGSFPSQTSDLPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSF 205          

HSP 2 Score: 63.5438 bits (153), Expect = 3.514e-33
Identity = 26/56 (46.43%), Postives = 36/56 (64.29%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVF*RD 295
            LS TFYD SCP   S +   + +A+ +   + A L+R+HFHDCF+QGCD S+   D
Sbjct:   31 LSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLND 86          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.958e-33
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 648
            SE++A PN +  +     VD+++  V   C  VVSC DILALA+  SV+L+GGP++++ LGRRD +T        +LPSPF N T +   F     N  + VALSG HT G A C  F+
Sbjct:   87 SEKDALPNTNSTR-GFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQCRTFS 204          

HSP 2 Score: 68.9366 bits (167), Expect = 5.958e-33
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS TFY  +CP + +IVR  +Q AL+ D  +   LIR+HFHDCFV GCDGS+
Sbjct:   25 LSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSL 76          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.010e-32
Identity = 49/118 (41.53%), Postives = 75/118 (63.56%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            +E+N+ PN S        VD ++A + K+C   VSCAD+L LAARDS  L+GGP++ +PLGRRDS++ +   +  N+P+P +    IL+ F  +  +  + VALSG HT+G + C +F
Sbjct:   91 TEKNSNPN-SKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSF 207          

HSP 2 Score: 64.3142 bits (155), Expect = 1.010e-32
Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            +Y  SCP++  IVR  +  A+ ++  +AA L+R+HFHDCFVQGCDGS+
Sbjct:   34 YYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSL 81          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.316e-32
Identity = 48/118 (40.68%), Postives = 73/118 (61.86%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            +E+N+ PN S      + VD+++A +  EC   VSCAD L LAARDS  L+GGP++ +PLGRRDS + +   +  N+P+P +    I+  F  +  +  + VALSG HT+G + C +F
Sbjct:   97 TEKNSNPN-SRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSF 213          

HSP 2 Score: 66.6254 bits (161), Expect = 1.316e-32
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY  SCP+ E IVR  +  A+ ++  +AA L+R+HFHDCFVQGCDGS+
Sbjct:   40 FYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSL 87          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.316e-32
Identity = 50/118 (42.37%), Postives = 70/118 (59.32%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATV---VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            +E+N+ PN S      + VD+++A +  EC   VSCAD L LAARDS  L+GGP++ +PLGRRDS T +      +LP P +    I   F  +  N  + VALSG HT+G + C +F
Sbjct:   96 TEKNSNPN-SRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSF 212          

HSP 2 Score: 67.0106 bits (162), Expect = 1.316e-32
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY  SCP+ E IVR  +  A +++  +AA L+R+HFHDCFVQGCDGS+
Sbjct:   39 FYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSL 86          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.714e-32
Identity = 51/119 (42.86%), Postives = 77/119 (64.71%), Query Frame = 1
Query:  298 TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            T EQNA PN +  +     +D++++ V K C  VVSCADILA+AARDSV   GGPN+++ +GRRD++T +      N+P+P S+ + +++ F     + R+ VALSG HT+G + C  F
Sbjct:   90 TGEQNAAPNRNSAR-GFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNF 207          

HSP 2 Score: 58.5362 bits (140), Expect = 1.714e-32
Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L+  FY  SCP L S V+  +++A+  +  + A ++R+ FHDCFV GCDGS+
Sbjct:   30 LTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSI 81          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.232e-32
Identity = 55/121 (45.45%), Postives = 77/121 (63.64%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG--PNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            +L+GS SE+ A PNLS+R    + +DD+++ V KEC RVVSCADI+ALA RD V L+ G    Y++P GR D K + A +V+LPSP          F ++  +  + V L GGHT+G+ HC
Sbjct:   80 LLDGSNSEKKASPNLSVR--GYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVDLPSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIGVTHC 198          

HSP 2 Score: 56.225 bits (134), Expect = 2.232e-32
Identity = 23/48 (47.92%), Postives = 32/48 (66.67%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY Q+C  +E+IV K +  A  KD  +A  +IR++FHDCF  GCD S+
Sbjct:   32 FYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASL 79          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.233e-32
Identity = 51/118 (43.22%), Postives = 70/118 (59.32%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            SE+ A PNL   +     ++D +  V K C  VVSCADIL +AARD+ A  GGP++ + LGRRDS T +  +   +LP PF     +++ F  K  + R+ VALSG HT+G A C  F
Sbjct:   90 SEKTALPNLGSAR-GFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLF 206          

HSP 2 Score: 66.6254 bits (161), Expect = 2.233e-32
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS TFYD +CP   + +R  ++ A+  +  +AA LIR+HFHDCFVQGCD S+
Sbjct:   29 LSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASI 80          
The following BLAST results are available for this feature:
BLAST of FC920815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER64_ARATH2.699e-3341.88Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER1_ARATH3.513e-3344.35Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER42_MAIZE3.514e-3343.09Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER15_IPOBA5.958e-3342.86Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER49_ARATH1.010e-3241.53Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER15_ARATH1.316e-3240.68Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER14_ARATH1.316e-3242.37Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER52_ARATH1.714e-3242.86Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER60_ARATH2.232e-3245.45Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PERX_NICSY2.233e-3243.22Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]

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Properties
Property NameValue
Genbank descriptionC32013D05EF RVDevelop1 Citrus clementina cDNA clone C32013D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920815 ID=FC920815; Name=FC920815; organism=Citrus clementina; type=EST; length=692bp
GACAACACAAAGCGAGGTAATCCCAATGGCAACTGCTTCAGCTTCTTCTT
TCATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAG
GCACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCA
GAGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCC
TGAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCAC
GATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAAC
ATTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGA
TCCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCC
CTCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAT
CGCCTCTATCCAAACAAGACCCCACACTGGACAAACATTCGC
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