FC920815

Overview
NameFC920815
Unique NameFC920815
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:104..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.262e-29
Identity = 52/125 (41.60%), Postives = 72/125 (57.60%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVNLPSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFT 648
            +L G  SE+ A  N++L     + +DD + ++   C  VVSCADILALAARDSV+L+ G ++ +P GRRD +    + V NLPSP  +  +    F     N R+ V L  GGHT+G A C   T
Sbjct:   77 LLSGPNSERTAGANVNLH--GFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVNNLPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFIT 199          

HSP 2 Score: 60.4622 bits (145), Expect = 1.262e-29
Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY  +CP  E+IVR  + +    D  +A GL+R+H HDCFVQGCDGSV
Sbjct:   29 FYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSV 76          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.644e-29
Identity = 57/132 (43.18%), Postives = 80/132 (60.61%), Query Frame = 1
Query:  304 EQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTIASIQTRPHTGQT 687
            EQNA PN+ SLR      +D+++ ++   C + VSCADIL +AARDSV   GGP++ +PLGRRDS T +  +   +LP P S+ + +   F +K  N  + VALSG HT+G A C  F     +TR + G T
Sbjct:   80 EQNAGPNVGSLR--GFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNF-----RTRIYGGDT 204          

HSP 2 Score: 54.6842 bits (130), Expect = 1.644e-29
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS TFYD SCP+    ++  +  A+  D  + A L+R+HFHDCF  GCD SV
Sbjct:   25 LSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASV 74          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.137e-29
Identity = 47/121 (38.84%), Postives = 71/121 (58.68%), Query Frame = 1
Query:  298 TSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK---TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            T E   R N + R  A  F  +D++++ +  EC   VSCAD+LAL ARDS+ + GGP++++ LGRRD++      ++ N+PSP S    IL  F  +  +  + VAL G HT+G + C  F
Sbjct:   99 TMESEKRSNAN-RDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGF 218          

HSP 2 Score: 63.929 bits (154), Expect = 2.137e-29
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS  FY+ SCP  ++IV+  + NA   D  +AA ++R+HFHDCFV GCD SV
Sbjct:   41 LSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASV 92          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.138e-29
Identity = 48/120 (40.00%), Postives = 71/120 (59.17%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            ++EGS +E+ A PN +L+      ++D + ++   C  VVSCADILALAARDSV  + G  + +P GRRD +    A   +LP+ F +  +    F  K  N ++ VAL+G HT+G A C
Sbjct:   84 LIEGSDAERTAIPNRNLK--GFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRAADAGDLPAFFDSVDIQKRKFLTKGLNTQDLVALTGAHTIGTAGC 201          

HSP 2 Score: 62.3882 bits (150), Expect = 2.138e-29
Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = 2
Query:  116 VAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            + +G    FY  +CP+ ESIV+  ++   + D  +A G++R+HFHDCFV GCDGS+
Sbjct:   28 LGQGTRVGFYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSI 83          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.786e-29
Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 1
Query:  355 VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVN--LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            +D ++ +V K C  +VSCADILA+ ARDSV L GGP + + LGRRDS T  FA   +  +P P +  + ++N F+ +  + R+ VALSG HT+G A C  F
Sbjct:   99 IDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTF 199          

HSP 2 Score: 59.3066 bits (142), Expect = 2.786e-29
Identity = 24/52 (46.15%), Postives = 37/52 (71.15%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L+  FY +SCP L  +VR+ ++ A+ ++  + A L+R+ FHDCFV GCDGS+
Sbjct:   21 LNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSL 72          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.621e-29
Identity = 56/129 (43.41%), Postives = 78/129 (60.47%), Query Frame = 1
Query:  283 VLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 648
            +L+ STS   E++A PN +  +     +D ++A + + C R VSCADI+ +A++ SV LSGGP + +PLGRRDS + F  + N  LPSPFS  T +   F +   N   + VALSGGHT G A C   T
Sbjct:   83 LLDNSTSFRTEKDAAPNKNSVR-GFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVT 210          

HSP 2 Score: 59.3066 bits (142), Expect = 3.621e-29
Identity = 24/48 (50.00%), Postives = 35/48 (72.92%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY ++CP + +I+   I N L+ D  +AA L+R+HFHDCFV+GCD S+
Sbjct:   35 FYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASI 82          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-28
Identity = 50/125 (40.00%), Postives = 74/125 (59.20%), Query Frame = 1
Query:  283 VLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHC 636
            +L+ +TS   E++A PN +  +     +D ++A V   C R VSCADIL +AA+ +V L+GGP++ +PLGRRDS + F  +   NLP+PF     +   F+    +   + VALSGGHT G   C
Sbjct:   83 LLDNTTSFRTEKDAAPNANSAR-GFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQC 206          

HSP 2 Score: 67.0106 bits (162), Expect = 1.040e-28
Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L+ TFYD +CP + +IVR  I N L+ D  +AA ++R+HFHDCFV GCD S+
Sbjct:   31 LTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASI 82          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.041e-28
Identity = 47/124 (37.90%), Postives = 74/124 (59.68%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVV--NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHC 636
            +L+ +TS +  +        A  F  +D ++A + K C R VSCAD+LA+AA++S+ L+GGP++ +P GRRDS + F  +   NLP P S    + + F+    + + + VALSGGHT G + C
Sbjct:   76 LLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQC 199          

HSP 2 Score: 67.0106 bits (162), Expect = 1.041e-28
Identity = 28/52 (53.85%), Postives = 39/52 (75.00%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS +FYD++CP++  IV   I NAL+ D  +AA ++R+HFHDCFV GCD S+
Sbjct:   24 LSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASI 75          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.355e-28
Identity = 50/124 (40.32%), Postives = 73/124 (58.87%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVV--NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHC 636
            +L+ +TS +  +      + A  F  +D ++A V K C + VSCAD+LA+AA+ SV L+GGP++ +P GRRDS + F  +   NLP P S   V+ + FR    +   + VALSGGHT G   C
Sbjct:   78 LLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQC 201          

HSP 2 Score: 64.3142 bits (155), Expect = 1.355e-28
Identity = 26/52 (50.00%), Postives = 38/52 (73.08%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS +FYD++CP++  I    I+ AL+ D  +AA ++R+HFHDCFV GCD S+
Sbjct:   26 LSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASI 77          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.355e-28
Identity = 49/124 (39.52%), Postives = 74/124 (59.68%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVV--NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHC 636
            +L+ +TS +  +        A  F  +D ++A V K C + VSCAD+LA+AA++SV L+GGP++ +P GRRDS + F  +   NLP+PF     + + F+    + A + VALSGGHT G   C
Sbjct:   76 LLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQC 199          

HSP 2 Score: 65.0846 bits (157), Expect = 1.355e-28
Identity = 27/52 (51.92%), Postives = 38/52 (73.08%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS +FYD++CP++  I    I NAL+ D  +AA ++R+HFHDCFV GCD S+
Sbjct:   24 LSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASI 75          
The following BLAST results are available for this feature:
BLAST of FC920815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER62_ARATH1.262e-2941.60Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER1_WHEAT1.644e-2943.18Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER36_ARATH2.137e-2938.84Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PERN1_TOBAC2.138e-2940.00Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER67_ARATH2.786e-2945.54Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER23_ARATH3.621e-2943.41Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER32_ARATH1.040e-2840.00Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER38_ARATH1.041e-2837.90Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER2_ARMRU1.355e-2840.32Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER37_ARATH1.355e-2839.52Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32013D05EF RVDevelop1 Citrus clementina cDNA clone C32013D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920815 ID=FC920815; Name=FC920815; organism=Citrus clementina; type=EST; length=692bp
GACAACACAAAGCGAGGTAATCCCAATGGCAACTGCTTCAGCTTCTTCTT
TCATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAG
GCACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCA
GAGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCC
TGAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCAC
GATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAAC
ATTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGA
TCCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCC
CTCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAT
CGCCTCTATCCAAACAAGACCCCACACTGGACAAACATTCGC
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