FC920815

Overview
NameFC920815
Unique NameFC920815
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:104..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.119e-27
Identity = 53/137 (38.69%), Postives = 69/137 (50.36%), Query Frame = 1
Query:  289 EGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTIASIQTRPHTGQTF 690
            E   +E++A  N SL  +    V   +  V  +C  VVSCADILALAARD V L GGP + + LGRRD   SK       LP P  +   ++  F     +  + +ALSG HT+G +HC  F       R H   TF
Sbjct:   88 ENEDAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFA-----NRLHNFSTF 219          

HSP 2 Score: 56.6102 bits (135), Expect = 1.119e-27
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVF 286
            LS  +Y  +CP +E IV++ +    K+ +  A   +R+ FHDCFV+GCD SVF
Sbjct:   32 LSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVF 84          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.121e-27
Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHC 636
            +E++A PN++  +     +D ++  + + C R VSCADIL +A++ SV LSGGP++ +PLGRRDS + F  + N  LPSPF     +   F +   N   + VALSGGHT G A C
Sbjct:   63 TEKDAAPNVNSAR-GFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARC 177          

HSP 2 Score: 58.9214 bits (141), Expect = 1.121e-27
Identity = 22/48 (45.83%), Postives = 36/48 (75.00%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY ++CP + +I++  I + L+ D  +AA ++R+HFHDCFV+GCD S+
Sbjct:    6 FYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASI 53          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.458e-27
Identity = 52/122 (42.62%), Postives = 68/122 (55.74%), Query Frame = 1
Query:  295 STSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS---KTFATVVNLPSPFSNTTVILNDFREK-TFNARETVALSGGHTVGLAHCPAF 645
            S  EQNA PN  SLR      +D ++ ++   C + VSCADIL +AARDSV   GGP++ +PLGRRDS          +LP   S+   +   F +K   N  + VALSG HT+G A C  F
Sbjct:   77 SGMEQNAIPNAGSLR--GFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTF 196          

HSP 2 Score: 63.929 bits (154), Expect = 1.458e-27
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS TFYD SCP+  + ++  +  A+  D  + A L+R+HFHDCFVQGCD SV
Sbjct:   23 LSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASV 74          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.893e-27
Identity = 53/117 (45.30%), Postives = 70/117 (59.83%), Query Frame = 1
Query:  298 TSEQNARPNLSLRKEALKFVDDLRARVHKECGRV-VSCADILALAARDSVALSGGPNYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            T EQN+ PN +  +   + +   +  V   C  + VSCADILA+AARDSVA  GG  Y++ LGR D++T      +  LP+PF N TV +  F +K F  RE VAL+G HTVG A C
Sbjct:  130 TGEQNSPPNANSAR-GYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARC 245          

HSP 2 Score: 48.1358 bits (113), Expect = 1.893e-27
Identity = 19/38 (50.00%), Postives = 26/38 (68.42%), Query Frame = 2
Query:  170 SIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            S VR  + +A+  +  + A LIR+HFHDCFV GCDG +
Sbjct:   83 SAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGI 120          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.214e-27
Identity = 47/121 (38.84%), Postives = 75/121 (61.98%), Query Frame = 1
Query:  295 STSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF-ATVVN--LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 648
            +T+E+++  NLSL  +    V   +  +   C   VSC+DI+A+A RD +   GGP Y++ LGRRDS+T  +++V+  LP P    + +++ F  + F+ +E VALSG HT+G +HC  FT
Sbjct:   91 NTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFT 211          

HSP 2 Score: 51.6026 bits (122), Expect = 3.214e-27
Identity = 24/52 (46.15%), Postives = 30/52 (57.69%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L+  FY +SCPK   I+R+ I N        AA  +R+ FHDCF  GCD SV
Sbjct:   32 LTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASV 83          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.441e-27
Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPS--PFSNTTV--ILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            +E+ A  N  LR+E    +   +A V   C  +VSC+DILA+AARD + L+GGP Y +  GR D K  +T  N+P   P SN+TV  ++  F  K     E V LSG HT+G AHC  F
Sbjct:  105 AEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKR-STAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNF 222          

HSP 2 Score: 53.5286 bits (127), Expect = 5.441e-27
Identity = 26/62 (41.94%), Postives = 36/62 (58.06%), Query Frame = 2
Query:  107 KPPVAKG---LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            KPP  +    LS  +Y + CP+LE++V        K+    A   IR+ FHDCFV+GCDGS+
Sbjct:   32 KPPAPRPHRELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSI 93          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 7.093e-27
Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 1
Query:  355 VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALS-GGHTVGLAHC 636
            +D+ ++ + + C  VVSCADI+ALAARD++A + GP Y++P GRRD          NLP    +   + + FREK  + ++ V LS G HT+G   C
Sbjct:  100 IDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHAKNLPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTAC 196          

HSP 2 Score: 68.5514 bits (166), Expect = 7.093e-27
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 2
Query:  119 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            A  L + FY ++CP  ESIVR  +Q A+  D G AA L+R+ FHDCFV+GCDGS+
Sbjct:   21 AAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSI 75          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.218e-27
Identity = 52/126 (41.27%), Postives = 74/126 (58.73%), Query Frame = 1
Query:  280 SVLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALS-GGPNYDLPLGRRDSK-TFATVV--NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            SV   + SE+ ARPNLSL     + +D+++  + K C   VSCADIL LAARD+V+     P +++  GR D + + AT    +LPS  +N T +   F E   +  + VALSG HT+G+AHC  F
Sbjct:  101 SVAGKAVSEKEARPNLSL--SGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVF 224          

HSP 2 Score: 57.3806 bits (137), Expect = 9.218e-27
Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L   FY  SCP  E IVR+ +   ++ +  LA  L+R+H+HDCFV+GCD S+
Sbjct:   46 LKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASL 97          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.223e-27
Identity = 43/116 (37.07%), Postives = 65/116 (56.03%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS----KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            +E ++  N  +RK  L  V  ++  +  EC + VSC+D++ LAARD+VAL+GGP   +PLGR+DS            LP   ++    L+ F  K     E+VA+ G HT+G+ HC
Sbjct:  100 TELDSAKNFGIRKRDL--VGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHC 213          

HSP 2 Score: 60.4622 bits (145), Expect = 9.223e-27
Identity = 25/54 (46.30%), Postives = 38/54 (70.37%), Query Frame = 2
Query:  122 KGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            +GLS+++Y+++CPK+E IVR  + +    D    A L+R+ FHDC VQGCD S+
Sbjct:   36 EGLSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASI 89          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.200e-26
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 1
Query:  283 VLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 648
            +L+ STS   E++A PN +  +     +D ++  + + C R VSCAD+L +A++ SV LSGGP + +PLGRRDS + F  + N  LPSPF     +   F +   N   + VALSGGHT G A C   T
Sbjct:   83 LLDNSTSFRTEKDAAPNANSAR-GFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVT 210          

HSP 2 Score: 56.6102 bits (135), Expect = 1.200e-26
Identity = 23/48 (47.92%), Postives = 35/48 (72.92%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY ++CP + +I+   I + L+ D  +AA L+R+HFHDCFV+GCD S+
Sbjct:   35 FYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASI 82          
The following BLAST results are available for this feature:
BLAST of FC920815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER55_ARATH1.119e-2738.69Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PERE5_ARMRU1.121e-2742.24Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER1_HORVU1.458e-2742.62Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PERX_SOLTU1.893e-2745.30Suberization-associated anionic peroxidase OS=Sola... [more]
PER63_ARATH3.214e-2738.84Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER19_ARATH5.441e-2742.86Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER13_ARATH7.093e-2740.21Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER24_ARATH9.218e-2741.27Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER29_ARATH9.223e-2737.07Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER3_ARMRU1.200e-2641.09Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionC32013D05EF RVDevelop1 Citrus clementina cDNA clone C32013D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920815 ID=FC920815; Name=FC920815; organism=Citrus clementina; type=EST; length=692bp
GACAACACAAAGCGAGGTAATCCCAATGGCAACTGCTTCAGCTTCTTCTT
TCATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAG
GCACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCA
GAGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCC
TGAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCAC
GATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAAC
ATTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGA
TCCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCC
CTCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAT
CGCCTCTATCCAAACAAGACCCCACACTGGACAAACATTCGC
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