FC920815

Overview
NameFC920815
Unique NameFC920815
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:104..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.562e-26
Identity = 55/129 (42.64%), Postives = 76/129 (58.91%), Query Frame = 1
Query:  283 VLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFT 648
            +L+ STS   E++A PN +  +     +D ++  + + C   VSCADIL +A++ SV LSGGP + +PLGRRDS + F  + N  LPSPF N T +   F +   N   + VALSGGHT G A C   T
Sbjct:   83 LLDNSTSFRTEKDAAPNANSAR-GFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVT 210          

HSP 2 Score: 53.9138 bits (128), Expect = 1.562e-26
Identity = 23/48 (47.92%), Postives = 33/48 (68.75%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY  +CP +  I+   I + L+ D  +AA L+R+HFHDCFV+GCD S+
Sbjct:   35 FYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASI 82          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.035e-26
Identity = 45/119 (37.82%), Postives = 64/119 (53.78%), Query Frame = 1
Query:  289 EGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            +G   E+ A  N     +  + +DD++  +   C  VVSCADILA+AA  SVAL+GGP+ D+ LGRRD +T      V  LP    +  ++ + F     +  + VALSG HT G   C
Sbjct:   84 DGVEGEKEAFQNAG-SLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQC 201          

HSP 2 Score: 62.3882 bits (150), Expect = 2.035e-26
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L+  FY  +CP + +I R  I+ A + D+ L A ++R+HFHDCFV GCDGSV
Sbjct:   25 LTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSV 76          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.650e-26
Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            +L G+ SE+ +  N  +     + +D  +A V + C  VVSCADILA+AARD+    GGP++ + LGRRDS T        +LP      + ++++F  K  N RE VALSG HT+G A C  F
Sbjct:   84 LLSGAGSERASPANDGVL--GYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRF 205          

HSP 2 Score: 56.6102 bits (135), Expect = 2.650e-26
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS TFYD +CP   S +R  I++++  +   AA +IR+ FHDCFVQGCD S+
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASL 83          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.650e-26
Identity = 50/124 (40.32%), Postives = 71/124 (57.26%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            +L G+ SE+ +  N  +     + +D  +A V + C  VVSCADILA+AARD+    GGP++ + LGRRDS T        +LP      + ++++F  K  N RE VALSG HT+G A C  F
Sbjct:   84 LLSGAGSERASPANDGVL--GYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRF 205          

HSP 2 Score: 56.6102 bits (135), Expect = 2.650e-26
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS TFYD +CP   S +R  I++++  +   AA +IR+ FHDCFVQGCD S+
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASL 83          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.442e-26
Identity = 53/117 (45.30%), Postives = 70/117 (59.83%), Query Frame = 1
Query:  298 TSEQNARPNLSLRKEALKFVDDLRARVHKECGRV-VSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            T EQN+ PN +  +   + +   +  V   C  + VSCADILA+AARDS+A  GG  Y + LGR D+ T  F+  +N LP+P  N TV +  F +K F  RE VAL+G HTVG A C
Sbjct:  130 TGEQNSPPNNNSVR-GFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARC 245          

HSP 2 Score: 49.2914 bits (116), Expect = 3.442e-26
Identity = 23/54 (42.59%), Postives = 33/54 (61.11%), Query Frame = 2
Query:  122 KGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            K LS     +SC  + S V+  + +A+  +  + A LIR+HFHDCFV GCDG +
Sbjct:   69 KYLSQQLTQESC--VFSAVKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGI 120          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.490e-26
Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 648
            +E++   N SL  +A   V  ++  +   C  VVSCADILA A RD V + GGP Y++ LGR+D   SK      NLP    +   +L+ F++  F  +E VALSGGHT+G +HC  F+
Sbjct:   87 AERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFS 205          

HSP 2 Score: 50.447 bits (119), Expect = 4.490e-26
Identity = 21/52 (40.38%), Postives = 32/52 (61.54%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L+  +Y ++CP    IVR+ +     +    AAG +R+ FHDCF++GCD SV
Sbjct:   26 LTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASV 77          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.847e-26
Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 1
Query:  277 ISVLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            IS    +T+E+++  NLSL  +    +   +  +   C   VSC+DI+++A RD +   GGP YD+ LGRRDS+T  + +    LP P +  + I+  F  K F  +E VALSG H++G +HC  F
Sbjct:   74 ISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEF 199          

HSP 2 Score: 51.2174 bits (121), Expect = 5.847e-26
Identity = 23/52 (44.23%), Postives = 31/52 (59.62%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L+  FY ++CP+   I+R  I N    +   AA +IR+ FHDCF  GCD SV
Sbjct:   21 LTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASV 72          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 7.608e-26
Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = 1
Query:  280 SVLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKE--CGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVV-NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 648
            S+L  S SE++   + SL  +    V   +  + ++  C   VSCADILALA RD V L+GGPNY + LGRRD +  T A+V  +LP P      +   F     +  + +ALSG HT+G AHC  F+
Sbjct:   75 SILLASPSEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFS 202          

HSP 2 Score: 55.0694 bits (131), Expect = 7.608e-26
Identity = 22/52 (42.31%), Postives = 33/52 (63.46%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L   FY +SCP +E+IVR  ++   ++    A   +R+ FHDCFV+GCD S+
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASI 76          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.841e-25
Identity = 45/125 (36.00%), Postives = 70/125 (56.00%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILND----FREKTFNARETVALSGGHTVGLAHCPAF 645
            +++G+++E++   N SL       +D  +  +   C   VSCADI+ALAARD+V  +GGP  ++P GRRD K  +   N+     +T   L+     F  K  + ++ V LSG HT+G +HC AF
Sbjct:   81 LIQGNSTEKSDPGNASLG--GFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKE-SMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASHCNAF 202          

HSP 2 Score: 56.6102 bits (135), Expect = 2.841e-25
Identity = 25/52 (48.08%), Postives = 33/52 (63.46%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS+ FY  SC   E +VR  +++A   D  +   L+R+ FHDCFVQGCD SV
Sbjct:   29 LSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASV 80          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 6.260e-25
Identity = 48/119 (40.34%), Postives = 66/119 (55.46%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFT 648
            +E++   N SL  +A   V  ++  +   C  VVSCADILA A RD V + GGP +D+ LGR+D   SK      N+P        I   F++  F+ RE VALSG HT+G +HC  F+
Sbjct:   94 AERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFS 212          

HSP 2 Score: 50.8322 bits (120), Expect = 6.260e-25
Identity = 20/48 (41.67%), Postives = 30/48 (62.50%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            +Y ++CP    IVR+ +     +    AAG +R+ FHDCF++GCD SV
Sbjct:   37 YYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASV 84          
The following BLAST results are available for this feature:
BLAST of FC920815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER22_ARATH1.562e-2642.64Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER58_ARATH2.035e-2637.82Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER2_ZINEL2.650e-2640.32Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL2.650e-2640.32Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER2_SOLLC3.442e-2645.30Suberization-associated anionic peroxidase 2 OS=So... [more]
PER41_ARATH4.490e-2641.18Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER31_ARATH5.847e-2637.30Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER16_ARATH7.608e-2639.84Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER46_ARATH2.841e-2536.00Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER65_ARATH6.260e-2540.34Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32013D05EF RVDevelop1 Citrus clementina cDNA clone C32013D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920815 ID=FC920815; Name=FC920815; organism=Citrus clementina; type=EST; length=692bp
GACAACACAAAGCGAGGTAATCCCAATGGCAACTGCTTCAGCTTCTTCTT
TCATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAG
GCACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCA
GAGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCC
TGAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCAC
GATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAAC
ATTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGA
TCCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCC
CTCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAT
CGCCTCTATCCAAACAAGACCCCACACTGGACAAACATTCGC
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