FC920815

Overview
NameFC920815
Unique NameFC920815
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:104..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 6.264e-25
Identity = 49/124 (39.52%), Postives = 70/124 (56.45%), Query Frame = 1
Query:  280 SVLEGSTSEQNARPNLSLRKEALKFVDDLRARV--HKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            S++  S SE++   ++SL  +    V   +  V  +  C   VSCADILALA R+ V L+GGP+Y + LGRRD +  T A+V + LP P  N   +   F     +  + +ALSG HT+G AHC
Sbjct:   77 SIMIASPSERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHC 200          

HSP 2 Score: 55.0694 bits (131), Expect = 6.264e-25
Identity = 23/56 (41.07%), Postives = 34/56 (60.71%), Query Frame = 2
Query:  116 VAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            V+  L   FY  SCP +E+IVR  ++   ++    A   +R+ FHDCFV+GCD S+
Sbjct:   23 VSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASI 78          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.380e-24
Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVI---LNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            ++ G+ +E++   N SL   A+  ++ ++  +   C   VSCADIL LAARD+V   GGP   +P GRRD +        P+       +   +N F  K  +  + V LSG HT+G AHC  F
Sbjct:   83 LIRGNGTERSDPGNASLGGFAV--IESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTF 204          

HSP 2 Score: 61.6178 bits (148), Expect = 1.380e-24
Identity = 29/55 (52.73%), Postives = 36/55 (65.45%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVF*R 292
            LS+ FY  SCP  E IVR  +++A   D  +   L+R+ FHDCFVQGCDGSV  R
Sbjct:   31 LSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIR 85          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 8.736e-24
Identity = 44/117 (37.61%), Postives = 66/117 (56.41%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVNLPSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAF 645
            SE++   N  +R    + +D+ +  +   C + VSCADI+ +A RDS+AL+GGP + +  GRRD  ++  + V L  P  +    +  F+   FN    VAL  GGHTVG+AHC  F
Sbjct:   83 SEKSVGRNAGVR--GFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPSDVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLF 197          

HSP 2 Score: 51.6026 bits (122), Expect = 8.736e-24
Identity = 24/58 (41.38%), Postives = 35/58 (60.34%), Query Frame = 2
Query:  110 PPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            P V   L   FY+ +CP  ESIV + + N   ++  + A L+R+ FHDC V+GCD S+
Sbjct:   16 PSVFAQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASL 73          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.135e-23
Identity = 47/125 (37.60%), Postives = 67/125 (53.60%), Query Frame = 1
Query:  277 ISVLEGSTSEQNARPNLSLRKEALKFVDDLRARVHK--ECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD--SKTFATV-VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            I+    + +E++   NLSL  +    V   +  +     C   VSCADIL +A RD V L+GGP YD+ LGR D  S T A+V   LP P  +   + + F +   +  + +ALSG HT+G AHC
Sbjct:   80 IASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLNDMIALSGAHTLGFAHC 204          

HSP 2 Score: 54.299 bits (129), Expect = 1.135e-23
Identity = 22/48 (45.83%), Postives = 30/48 (62.50%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY  SCP +E IVR  +Q  +++        +R++FHDCFV GCD SV
Sbjct:   31 FYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASV 78          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.478e-23
Identity = 42/117 (35.90%), Postives = 60/117 (51.28%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARV--HKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            +E++   N+SL  +    V   +  +  +  C   VSCADIL LA RD V  +GGP+Y++ LGR D   S   +   NLP P  N   +   F +      + +ALS  HT+G AHC
Sbjct:   88 AEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHC 204          

HSP 2 Score: 58.5362 bits (140), Expect = 1.478e-23
Identity = 25/52 (48.08%), Postives = 32/52 (61.54%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            LS  FY ++CP +E IVR  +Q  +KK        +R+ FHDCFV GCD SV
Sbjct:   27 LSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASV 78          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.512e-23
Identity = 49/128 (38.28%), Postives = 65/128 (50.78%), Query Frame = 1
Query:  280 SVLEGSTS----EQNARPNLSLRKEALKFVDDLRARVHK--ECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            SV+  ST+    E++   NLSL  +    V   +  V     C   VSCADIL +A RD V L+GGP Y + LGRRD   S   +    LP P  +   +   F E   +  + +ALSG HT+G AHC
Sbjct:   77 SVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHC 204          

HSP 2 Score: 53.5286 bits (127), Expect = 5.512e-23
Identity = 21/48 (43.75%), Postives = 30/48 (62.50%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            FY  +CP +E IVR  +Q  +++        +R++FHDCFV GCD SV
Sbjct:   31 FYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASV 78          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.055e-22
Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 1
Query:  298 TSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVAL--SGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF 645
            T E+ A PN  SLR    + +D ++  +   C  VVSCADI+A AARD+      G  ++D+P GR D   S    +V  L  P SN + + + F  K  +  + V LSG HTVG +HC +F
Sbjct:   96 TPEKLAAPNNPSLR--GFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSF 215          

HSP 2 Score: 55.0694 bits (131), Expect = 2.055e-22
Identity = 22/48 (45.83%), Postives = 35/48 (72.92%), Query Frame = 2
Query:  140 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            +Y  +CP+ E+IV+  ++ A+ ++ G  A +IR+ FHDCFV+GCD SV
Sbjct:   39 YYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASV 86          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.475e-22
Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 1
Query:  283 VLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFA-TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            +L+   +E+ +  + +LR    + +DD+++ + K C   VSCADIL  A+R +    GGP +    GRRDSK ++A  V  +PS   + T +L  F+    N  + V LSG HT+G A C
Sbjct:  103 LLDYEGTERRSPASKTLR--GFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEKVPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASC 220          

HSP 2 Score: 53.9138 bits (128), Expect = 3.475e-22
Identity = 25/57 (43.86%), Postives = 33/57 (57.89%), Query Frame = 2
Query:  113 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            P+   LS  +YD+ CP  E IV  +++   K D  L   L+R+ FHDC V GCD SV
Sbjct:   46 PLDNLLSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASV 102          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.480e-22
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 1
Query:  301 SEQNARPNLSLRKEALKFVDDLRARVHK--ECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATV-VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            +E++   N+SL  +    V   +  +     C   VSCADILALA RD V  + GP+Y + LGR D    T A+V  NLP P +  T +   F +      + +ALS  HT+G AHC
Sbjct:   88 AEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHC 204          

HSP 2 Score: 56.9954 bits (136), Expect = 3.480e-22
Identity = 24/52 (46.15%), Postives = 31/52 (59.62%), Query Frame = 2
Query:  128 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSV 283
            L   FY  SCP +E IV+K +Q  +K+        +R+ FHDCFV GCD SV
Sbjct:   27 LKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASV 78          
BLAST of FC920815 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.652e-22
Identity = 44/117 (37.61%), Postives = 61/117 (52.14%), Query Frame = 1
Query:  298 TSEQNARPNLSLRKEALKFVDDLRARVHKECGRV-VSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATV---VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 636
            T EQ A  N S        +D  +     +C    VSCAD+LA+AARD+        Y++ LGR+D++T         LP+PF N ++    F +K FN RE V L+G HTVG + C
Sbjct:  120 TGEQGAPAN-SNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRC 235          

HSP 2 Score: 47.7506 bits (112), Expect = 7.652e-22
Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 2
Query:  146 DQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVF*RD 295
            D +C  + S V++ +  A+  +  + A LIR+HFHDCFV GCDG +   D
Sbjct:   68 DSNC--VFSAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLND 115          
The following BLAST results are available for this feature:
BLAST of FC920815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER45_ARATH6.264e-2539.52Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER18_ARATH1.380e-2434.68Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER8_ARATH8.736e-2437.61Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER50_ARATH1.135e-2337.60Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER35_ARATH1.478e-2335.90Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER51_ARATH5.512e-2338.28Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER2_MAIZE2.055e-2238.52Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER7_ARATH3.475e-2235.83Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER73_ARATH3.480e-2237.61Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PERN_IPOBA7.652e-2237.61Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32013D05EF RVDevelop1 Citrus clementina cDNA clone C32013D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920815 ID=FC920815; Name=FC920815; organism=Citrus clementina; type=EST; length=692bp
GACAACACAAAGCGAGGTAATCCCAATGGCAACTGCTTCAGCTTCTTCTT
TCATTTCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAG
GCACAAAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCA
GAGCTGTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCC
TGAAAAAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCAC
GATTGCTTCGTTCAGGGATGTGATGGATCAGTGTTCTAGAGGGATCAACT
AGTGAGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAA
ATTTGTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTG
TTTCTTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTG
TCTGGAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAAC
ATTCGCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGA
TCCTCAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCC
CTCTCCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAT
CGCCTCTATCCAAACAAGACCCCACACTGGACAAACATTCGC
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