FC920826

Overview
NameFC920826
Unique NameFC920826
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC920826_ssr43 microsatellite FC920826_ssr43:43..54. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig12222 contig Ccv1_Contig12222:43..752. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: YC5C_SCHPO (Uncharacterized protein C1259.12c OS=Schizosaccharomyces pombe GN=SPCC1259.12c PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.202e-28
Identity = 58/152 (38.16%), Postives = 87/152 (57.24%), Query Frame = 2
Query:  170 HDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKGVRSTERMK 625
            HD   V+A+   P    +YY+EI +   G +G++ +GF  +S +  R PG  A S GYHG+ G  +     GEA+GP FTT D +G G+N+ ++  F+TKNG+ +G  +K +   L+P I + S  E V VNFGQ  F +D+      E+ K
Sbjct:   96 HDAASVKADHAIPSNTSIYYYEIQILSRGKEGKMGVGFCRKSMQTNRLPGCTAESWGYHGNSGEKFNCSKTGEAYGPEFTTGDIIGCGVNFINRTIFYTKNGAYLGVAFKKVSDVLYPVIGLKSHGEHVEVNFGQNPFLYDIDYAIQMEKNK 247          
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: SPRY3_PONAB (SPRY domain-containing protein 3 OS=Pongo abelii GN=SPRYD3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20
Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 2
Query:  152 SVNLHGH--DVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYAS-----QEFFFTKNGSLVGAVYKDIK-GPLFPTIAVHSQNEEV 556
            +++ HG+  +VG   A++P  + +   YFE+ + D+G +G IA+G   + + +  QPGW  +S  YH DDG LY G+ KG  FG    + D +G GI   S      + FFTKNG  VG+    +    LFP + +HS  EEV
Sbjct:   55 TLSYHGNSGEVGCYVASRP--LTKDSNYFEVSIVDSGVRGTIAVGLVPQYYSLDHQPGWLPDSVAYHADDGKLYNGRAKGRQFGSKCNSGDRIGCGIEPVSFDVQTAQIFFTKNGKRVGSTIMPMSPDGLFPAVGMHSLGEEV 195          

HSP 2 Score: 72.7886 bits (177), Expect = 2.061e-12
Identity = 34/90 (37.78%), Postives = 47/90 (52.22%), Query Frame = 2
Query:  173 DVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINY 442
            DVG+ QA  P   +   +YFE+ + D G K  IA+G   + +   R PGW   S  YH DDG ++ G G G+ F P     D +G GI +
Sbjct:  244 DVGLAQARHPLSTRS--HYFEVEIVDPGEKCYIALGLARKDYPKNRHPGWSRGSVAYHADDGKIFHGSGVGDPFEPRCYKGDIMGCGIMF 331          
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: SPRY3_HUMAN (SPRY domain-containing protein 3 OS=Homo sapiens GN=SPRYD3 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20
Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 2
Query:  152 SVNLHGH--DVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYAS-----QEFFFTKNGSLVGAVYKDIK-GPLFPTIAVHSQNEEV 556
            +++ HG+  +VG   A++P  + +   YFE+ + D+G +G IA+G   + + +  QPGW  +S  YH DDG LY G+ KG  FG    + D +G GI   S      + FFTKNG  VG+    +    LFP + +HS  EEV
Sbjct:   55 TLSYHGNSGEVGCYVASRP--LTKDSNYFEVSIVDSGVRGTIAVGLVPQYYSLDHQPGWLPDSVAYHADDGKLYNGRAKGRQFGSKCNSGDRIGCGIEPVSFDVQTAQIFFTKNGKRVGSTIMPMSPDGLFPAVGMHSLGEEV 195          

HSP 2 Score: 75.8702 bits (185), Expect = 2.434e-13
Identity = 35/90 (38.89%), Postives = 48/90 (53.33%), Query Frame = 2
Query:  173 DVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINY 442
            DVG+ QA  P   +   +YFE+ + D G K  IA+G   + +   R PGW   S  YH DDG ++ G G G+ FGP     D +G GI +
Sbjct:  244 DVGLAQARHPLSTRS--HYFEVEIVDPGEKCYIALGLARKDYPKNRHPGWSRGSVAYHADDGKIFHGSGVGDPFGPRCYKGDIMGCGIMF 331          
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: PYK1_DICDI (Dual specificity protein kinase pyk1 OS=Dictyostelium discoideum GN=splA PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 5.240e-16
Identity = 44/138 (31.88%), Postives = 72/138 (52.17%), Query Frame = 2
Query:  227 YFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYR-----GQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQ----KKFAFDLKGVRST 613
            YFE+ ++    KGQ++IG  +  +      GW   S GYH DDG  +R     G  +GE++G ++   D +G G+++ S+E FFTKNG  +G  + ++ G  +P++A +     +   FG      +    LK V ST
Sbjct: 1087 YFEVIIDQLD-KGQLSIGLANLEYPTFYHVGWMPRSYGYHNDDGRKFRWREEPGVNEGESYGSSYKKGDIIGCGLSFTSREIFFTKNGMYLGTAFSNVYGVFYPSVAFNEPGISITGVFGPPFKFSQVTLMLKNVNST 1223          

HSP 2 Score: 74.3294 bits (181), Expect = 7.082e-13
Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 2
Query:  191 ANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIK-GPLFPTIAVHSQNEEVLVNF 568
            A    P      YFE+++ + G   +I  G T+    +   PG    S GY GD G  Y G  +G  +GP+F++ D VG G + +S+  +FTKNG  +G   + +    L+PT+ + +  E V++NF
Sbjct:  875 AKSTQPFSSSFTYFELFITN-GNGDKICFGLTTNDHPIEVYPGNYQGSYGYSGD-GKCYFGTNEGRVYGPSFSSGDVVGCGYDSSSKTLYFTKNGVYLGVAAQKVNLIGLYPTVGLQNPGESVVINF 999          
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: SSH4_COCIM (Protein SSH4 OS=Coccidioides immitis GN=SSH4 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12
Identity = 45/136 (33.09%), Postives = 62/136 (45.59%), Query Frame = 2
Query:  185 VQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGP-LFPTIAVHSQNEEVLVNFGQKKFAF 589
            VQ+N P P +  VYY+E  + D      I+IG T++ + + R PG+   S  Y       +        +GP F   D VG G    S   FFT+NG  +  V   +K    FPT+  +     V VNFGQ  F F
Sbjct:  204 VQSNLPVPKQNEVYYWEAKIYDKPETSLISIGMTTKPYPLFRLPGFHKTSISYQSTGHRRHNQPFTPTLYGPEFVQGDVVGVGYRPRSGTIFFTRNGKKLEDVAHGLKSQNFFPTVGANGPC-TVHVNFGQLGFVF 338          
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: SSH4_SCLS1 (Protein ssh4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=ssh4 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11
Identity = 42/133 (31.58%), Postives = 59/133 (44.36%), Query Frame = 2
Query:  194 NKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGP-LFPTIAVHSQNEEVLVNFGQKKFAF 589
            N P P +  VYY+E  + D      I+IG  ++ + + R PGW   S  Y       Y     G  +GP +   D +G G    +   FFT+NG  +  V   +K   LFP +  +     V VNFGQ  F F
Sbjct:  194 NLPVPKQNEVYYWESKIYDKPENTLISIGVATKPYPLFRLPGWHKYSVAYTSTGHRRYNQPFSGPVYGPQYVQGDVIGVGYRPRTGTIFFTRNGKKLEDVAHGLKSQNLFPAVGANGPC-TVHVNFGQSGFVF 325          
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: SSH4_BOTFB (Protein ssh4 OS=Botryotinia fuckeliana (strain B05.10) GN=ssh4 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11
Identity = 42/133 (31.58%), Postives = 59/133 (44.36%), Query Frame = 2
Query:  194 NKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGP-LFPTIAVHSQNEEVLVNFGQKKFAF 589
            N P P +  VYY+E  + D      I+IG  ++ + + R PGW   S  Y       Y     G  +GP +   D +G G    +   FFT+NG  +  V   +K   LFP +  +     V VNFGQ  F F
Sbjct:  208 NLPVPKQNEVYYWESKIYDKPENTLISIGVATKPYPLFRLPGWHKYSVAYTSTGHRRYNQPFSGPVYGPQYVQGDVIGVGYRPRTGTIFFTRNGKKLEDVAHGLKSQNLFPAVGANGPC-TVHVNFGQSGFVF 339          
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: SSH4_NEOFI (Protein ssh4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ssh4 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 44/136 (32.35%), Postives = 59/136 (43.38%), Query Frame = 2
Query:  185 VQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGP-LFPTIAVHSQNEEVLVNFGQKKFAF 589
            VQ N P P +  VYY+E  + +      I+IG T++ + + R PG+   S  Y       Y        +GP     D VG G    S   FFT+NG  +  V    K    FPT+  +     V VNFGQ  F F
Sbjct:  210 VQTNLPVPKQNDVYYWEAKIYEKPESTHISIGMTTKPYPLFRLPGFHKTSVAYLSTGHRRYNQPFSATPYGPPLAQGDVVGVGYRPRSGTIFFTRNGKKLEDVVHGAKTQNFFPTVGANGPC-TVHVNFGQMGFVF 344          
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: SSH4_ASPFU (Protein ssh4 OS=Aspergillus fumigatus GN=ssh4 PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 44/136 (32.35%), Postives = 59/136 (43.38%), Query Frame = 2
Query:  185 VQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGP-LFPTIAVHSQNEEVLVNFGQKKFAF 589
            VQ N P P +  VYY+E  + +      I+IG T++ + + R PG+   S  Y       Y        +GP     D VG G    S   FFT+NG  +  V    K    FPT+  +     V VNFGQ  F F
Sbjct:  210 VQTNLPVPKQNDVYYWEAKIYEKPESTLISIGMTTKPYPLFRLPGFHKTSVAYLSTGHRRYNQPFSASPYGPALAQGDVVGVGYRPRSGTIFFTRNGKKLEDVVHGAKTQNFFPTVGANGPC-TVHVNFGQMGFVF 344          
The following BLAST results are available for this feature:
BLAST of FC920826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
YC5C_SCHPO1.202e-2838.16Uncharacterized protein C1259.12c OS=Schizosacchar... [more]
SPRY3_PONAB7.812e-2037.06SPRY domain-containing protein 3 OS=Pongo abelii G... [more]
SPRY3_HUMAN7.812e-2037.06SPRY domain-containing protein 3 OS=Homo sapiens G... [more]
PYK1_DICDI5.240e-1631.88Dual specificity protein kinase pyk1 OS=Dictyostel... [more]
SSH4_COCIM7.830e-1233.09Protein SSH4 OS=Coccidioides immitis GN=SSH4 PE=3 ... [more]
SSH4_SCLS11.744e-1131.58Protein ssh4 OS=Sclerotinia sclerotiorum (strain A... [more]
SSH4_BOTFB1.744e-1131.58Protein ssh4 OS=Botryotinia fuckeliana (strain B05... [more]
SSH4_NEOFI8.658e-1132.35Protein ssh4 OS=Neosartorya fischeri (strain ATCC ... [more]
SSH4_ASPFU8.658e-1132.35Protein ssh4 OS=Aspergillus fumigatus GN=ssh4 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionC32013E06EF RVDevelop1 Citrus clementina cDNA clone C32013E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920826 ID=FC920826; Name=FC920826; organism=Citrus clementina; type=EST; length=710bp
GGCGCTGGCCCGGGCTTCTTCGCGCTCGATGGGCGGAAAGCGGGAGGAGG
AGGATTTTGAGGAAGAAGAGGTGCCGACGGAGCTGAACACGATCAACAGC
TCTGGAGGGTTCCTGGTGGTTTCGCCGGATAAGTTGTCGGTCAAGTACAC
TAGCGTCAATCTGCACGGCCATGATGTCGGCGTCGTCCAAGCTAACAAGC
CGGCCCCTGTTAAGCGGCTTGTTTATTACTTTGAGATTTACGTGGAGGAC
GCTGGTGCCAAGGGCCAGATTGCCATTGGATTTACCAGTGAGTCTTTCAA
GATGCGGAGGCAACCAGGGTGGGAAGCGAACAGTTGTGGATACCATGGGG
ATGATGGATTGCTTTATCGTGGACAAGGAAAGGGAGAGGCCTTTGGCCCT
ACGTTTACAACTAATGATACTGTTGGTGGTGGTATTAACTATGCTTCACA
GGAATTTTTTTTCACTAAAAATGGTTCATTAGTAGGAGCAGTGTACAAGG
ACATCAAGGGTCCCTTGTTTCCGACCATTGCTGTTCACAGCCAAAACGAG
GAGGTTCTTGTCAACTTCGGCCAGAAAAAATTTGCTTTTGATCTTAAAGG
AGTACGAAGCACAGAGAGGATGAAGCAACAAATGACAATTGAAAAGATTT
CACTACCCCCTAATGTCAGTTATGGACTTGTTCGCTCCCTACTTACACAT
TATGGATATG
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