FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14954 contig Ccv1_Contig14954:702..1399. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.412e-50
Identity = 105/213 (49.30%), Postives = 146/213 (68.54%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYK-LASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            R FT+ EL +AT+ FS  + L  GGF +V+RG   DG VVAVK+ K +  + G+ +F +E+E++S A HRN++ LIG+C     RLLVY Y+ NGS+ S L  + +  L+W+ R+KIA+GAARGL YLHE+C    I+HRD++  NIL+   FE +VGDFGLA+     D  V T V GT G++APEY  +GQ +EK DV+  G++L+ELITG
Sbjct:  285 RSFTFRELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRL--KAKPALDWNTRKKIAIGAARGLFYLHEQCDPK-IIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 494          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.844e-50
Identity = 100/215 (46.51%), Postives = 141/215 (65.58%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG--RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            RW+T  ELE ATN   E N + EGG+  V+RG+L DG  VAVK       Q ++EF  EVEV+   +H+N+V L+G+CVE   R+LVY+++ NG+L+  ++G   D  PL W  R  I +G A+GL YLHE      +VHRD++ +NIL+   +   V DFGLA+        V TRV+GTFGY+APEYA +G + EK+D+YS G++++E+ITGR
Sbjct:  140 RWYTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPK-VVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGR 353          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50
Identity = 102/212 (48.11%), Postives = 143/212 (67.45%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT+ EL   TN FS+AN +  GG+  V++G LP+GQV+A+K+ +  S QG  EF +E+E+LS   H+NVV L+GFC +   ++LVYEYI NGSL   L G++   L+W+ R KIA+G+ +GL YLHE      I+HRD++ NNIL+       V DFGL++   D +   V T+V GT GYL PEY  + Q+TEK+DVY  GVV++EL+TG+
Sbjct:  622 FTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPP-IIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGK 832          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.009e-50
Identity = 101/216 (46.76%), Postives = 143/216 (66.20%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCV-----EDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F++ E++ ATN FS  N +  GG+ +V +G LPDG  VA K++K  S+ GD  F  EVEV++  +H N++ L G+C      E  +R++V + + NGSL  HL+G     L W  R++IA+G ARGL YLH   +   I+HRD++ +NIL+   FE  V DFGLA++ P+G   + TRV GT GY+APEYA  GQ+TEK+DVYS GVVL+EL++ R
Sbjct:  271 FSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPS-IIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRR 485          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.009e-50
Identity = 102/216 (47.22%), Postives = 140/216 (64.81%), Query Frame = 3
Query:   54 PPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG--RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            P   FT  +++ AT+ F+  N + EGGF +V +GVL DG+VVAVKQ    S QG++EF +E+  +SC QH N+V L GFCVE  + LL YEY+ N SL S L+     + P++W  R KI  G A+GL +LHEE  +   VHRD++  NIL+  D  P + DFGLAR   +    + T+V GT GY+APEYA  G +T KADVYS GV+++E++ G
Sbjct:  665 PSGTFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLK-FVHRDIKATNILLDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAG 879          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.039e-49
Identity = 102/213 (47.89%), Postives = 143/213 (67.14%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHL---YGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F++ E++ AT+ FS  N L +GGF  V++G LP+G VVAVK+ K     G+ +F +EVE++  A HRN++ L GFC+    R+LVY Y+ NGS+   L   YG ++  L+W+ R  IA+GAARGL YLHE+C    I+HRD++  NIL+   FE +VGDFGLA+     D  V T V GT G++APEY  +GQ +EK DV+  GV+++ELITG
Sbjct:  288 FSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYG-EKPSLDWNRRISIALGAARGLVYLHEQCNPK-IIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITG 498          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.039e-49
Identity = 100/213 (46.95%), Postives = 147/213 (69.01%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLY-GRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F +  +E AT++FS  N L +GGF  V++G LP+G  VAVK+    S QG++EF +EV V++  QHRN+V L+GFC+E   ++LVYE++ N SLD  L+  R +  L+W+ R KI  G ARG+ YLH++ R+  I+HRD++  NIL+  D  P V DFG+AR ++ D       RV+GT+GY++PEYA  GQ + K+DVYS GV+++E+I+GR
Sbjct:  328 FDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQVAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRL-TIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGR 539          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.663e-49
Identity = 105/214 (49.07%), Postives = 138/214 (64.49%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDM-GVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R F + E+  ATN+F E++ L  GGF  V++G L DG  VAVK+    S QG  EF +E+E+LS  +HR++V LIG+C E    +LVYEY+ NG L SHLYG D  PL W  R +I +GAARGL YLH       I+HRD++  NIL+  +    V DFGL++  P  D   V T V G+FGYL PEY +  Q+TEK+DVYS GVVL+E++  R
Sbjct:  496 RCFMFQEIMDATNKFDESSLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQS-IIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCR 708          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.543e-49
Identity = 103/216 (47.69%), Postives = 149/216 (68.98%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDM------GVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            FTYAEL LAT+ F+ +  + +GG+  V++G L  G VVA+K+ +  S QG++EF +E+E+LS   HRN+V L+GFC E+G ++LVYEY+ NG+L  ++  + ++PL+++ R +IA+G+A+G+ YLH E     I HRD++ +NIL+   F   V DFGL+R  P  DM       V T V GT GYL PEY  + Q+T+K+DVYSLGVVL+EL TG
Sbjct:  613 FTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPP-IFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTG 827          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.933e-49
Identity = 100/213 (46.95%), Postives = 140/213 (65.73%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVE---TRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            +  L+ AT+ FS  N L  GGF SV++GV P GQ +AVK+    S QGD EF +E+ +L+  QHRN+V LIGFC++   RLLVYE+I N SLD  ++  + R  L+W  R K+  G ARGL YLHE+ R   I+HRD++ +NIL+  +  P + DFGLA+    G        +R+ GT+GY+APEYA  GQ + K DV+S GV+++E+ITG+
Sbjct:  347 FETLKTATDNFSSENELGRGGFGSVYKGVFPQGQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFR-IIHRDLKASNILLDQEMNPKIADFGLAKLFDSGQTMTHRFTSRIAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEIITGK 558          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2239_ARATH1.412e-5049.30Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH1.844e-5046.51Probable serine/threonine-protein kinase At1g01540... [more]
Y5977_ARATH3.146e-5048.11Probable leucine-rich repeat receptor-like protein... [more]
RKF3_ARATH7.009e-5046.76Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH7.009e-5047.22Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH2.039e-4947.89Probable LRR receptor-like serine/threonine-protei... [more]
CRK5_ARATH2.039e-4946.95Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
THE1_ARATH2.663e-4949.07Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
Y1684_ARATH4.543e-4947.69Probable LRR receptor-like serine/threonine-protei... [more]
CRK29_ARATH5.933e-4946.95Cysteine-rich receptor-like protein kinase 29 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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