FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.852e-43
Identity = 97/213 (45.54%), Postives = 136/213 (63.85%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FTYAE+   TN F +   L +GGF  V+ G +   + VAVK    +S+QG ++F +EVE+L    H+N+V L+G+C E  +  L+YEY+ NG LD H+ G R    L W  R KIA+ AA+GL YLH  C+   +VHRD++  NIL+   F+  + DFGL+R  P +G+  V T V GT GYL PEY ++  +TEK+DVYS GVVL+ +IT +
Sbjct:  567 FTYAEVLTMTNNFQK--ILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCK-PLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQ 776          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.852e-43
Identity = 91/216 (42.13%), Postives = 139/216 (64.35%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG----RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVET-RVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F   ++E AT+ F  +N + +GGF  V++G L +G  VAVK+    S QG+ EF +EV +++  QHRN+V L+GF ++   ++LV+E++ N SLD  L+G      +  L+W+ R  I  G  RGL YLH++ R+  I+HRD++ +NIL+  D  P + DFG+AR   D      T RV+GTFGY+ PEY   GQ + K+DVYS GV+++E+++GR
Sbjct:  334 FDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRL-TIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGTFGYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGR 548          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 3.725e-43
Identity = 99/215 (46.05%), Postives = 137/215 (63.72%), Query Frame = 3
Query:   78 ELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR-------DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVE-TRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            EL+  T+ F     + EG +  V+ GVL  G+  A+K+   +S Q D+EF ++V ++S  +  NVV L+G+CV+ G R+L YEY  NGSL   L+GR           L W+ R KIAVGAA+GL YLHE+ +   I+HRD++ +NIL+  D    + DF L+   PD    +  TRVLGTFGY APEYA +GQ++ K+DVYS GVVL+EL+TGR
Sbjct:   60 ELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLD-SSKQPDREFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPH-IIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLSSKSDVYSFGVVLLELLTGR 272          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 4.865e-43
Identity = 96/212 (45.28%), Postives = 134/212 (63.21%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT   ++ ATN ++E+  L +GG  +V++G+LPD  +VA+K+ +L  S   ++F +EV VLS   HRNVV L+G C+E    LLVYE+I NG+L  HL+G   D  L W  R KIA+  A  L YLH    +  I+HRD++  NIL+  +    V DFG +R  P     +ET V GT GYL PEY  +G + EK+DVYS GVVL+EL++G+
Sbjct:  397 FTEDGMKKATNGYAESRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIP-IIHRDIKTANILLDVNLTAKVADFGASRLIPMDKEELETMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQ 607          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.865e-43
Identity = 95/218 (43.58%), Postives = 134/218 (61.47%), Query Frame = 3
Query:   57 PRWFTYAELELATNRFSEANFLAEGGFVSVHRG-VLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP---LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            P  F Y +L  AT  F E   +  GGF  V+RG +      +AVK+    S QG +EF +E+E L   +H+N+V L G+C      LL+Y+YI NGSLDS LY + R     L W+AR +IA G A GL YLHEE     ++HRD++P+N+L+  D  P +GDFGLAR    G     T V+GT GY+APE A++G  +  +DV++ GV+L+E+++GR
Sbjct:  348 PHRFRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQ-IVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGR 564          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.299e-43
Identity = 100/207 (48.31%), Postives = 133/207 (64.25%), Query Frame = 3
Query:   81 LELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            LE AT+ FS+   +  G F SV+ G + DG+ VAVK     SS  +++F +EV +LS   HRN+V LIG+C E  RR+LVYEY+ NGSL  HL+G  D  PL+W  R +IA  AA+GL YLH  C    I+HRD++ +NIL+  +    V DFGL+R   +    V +   GT GYL PEY  S Q+TEK+DVYS GVVL EL++G+
Sbjct:  601 LEEATDNFSKK--VGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPS-IIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGK 804          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.299e-43
Identity = 98/219 (44.75%), Postives = 138/219 (63.01%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLY----GRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARW--QPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R   +++L  ATN FS A+ +  GGF  V +  L DG  VA+K+    S QGD+EF +E+E L   +HRN+V L+G+C     RLLVYE++  GSL+  L+    G  R  L W  R+KIA GAA+GL +LH  C +  I+HRDM+ +N+L+  D E  V DFG+AR     D  + V T + GT GY+ PEY QS + T K DVYS+GVV++E+++G+
Sbjct:  824 RKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNC-IPHIIHRDMKSSNVLLDQDMEARVSDFGMARLISALDTHLSVST-LAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGK 1040          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.084e-42
Identity = 89/213 (41.78%), Postives = 135/213 (63.38%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGR-DRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F +  +E AT  F   N L  GGF  V++G  P+G  VAVK+    S QG++EF +EV +++  QHRN+V L+G+ V+   ++LVYE++ N SLD  L+    +  L+W+ R  I  G  RG+ YLH++ R+  I+HRD++  NIL+  D  P + DFG+AR ++ D       RV+GT GY+ PEY  +GQ + K+DVYS GV+++E+I G+
Sbjct:  300 FEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLDWTRRYNIINGITRGIVYLHQDSRL-TIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGK 511          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.084e-42
Identity = 91/216 (42.13%), Postives = 140/216 (64.81%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGR-DRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR----WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F +  ++ AT+ F ++N L  GGF +V++G+ P+G  VA K+    S QG+ EF +EV +++  QH+N+V L+GF VE   ++LVYE++ N SLD  L+    R  L+W  R  I  G  RG+ YLH++ R+  I+HRD++ +NIL+  +  P + DFGLAR     Q + + G   RV+GTFGY+ PEY  +GQ + K+DVYS GV+++E+I G+
Sbjct:  351 FDFRAIKAATSNFHKSNKLGHGGFGAVYKGMFPNGTEVAAKRLSKPSDQGEPEFKNEVLLVARLQHKNLVGLLGFSVEGEEKILVYEFVPNKSLDHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRL-TIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTG---RVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGK 562          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.416e-42
Identity = 93/221 (42.08%), Postives = 137/221 (61.99%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLP----------DGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            + + +L+ AT  F   + L +GGF  V+RG +            G +VA+K+    S QG  E+ SEV  L    HRN+V L+G+C ED   LLVYE++  GSL+SHL+ R+ DP  W  R KI +GAARGL +LH   R   +++RD + +NIL+  +++  + DFGLA+  P D    V TR++GT+GY APEY  +G +  K+DV++ GVVL+E++TG
Sbjct:   74 YNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGFAEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRN-DPFPWDLRIKIVIGAARGLAFLHSLQRE--VIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTG 291          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5181_ARATH2.852e-4345.54Probable LRR receptor-like serine/threonine-protei... [more]
CRK30_ARATH2.852e-4342.13Putative cysteine-rich receptor-like protein kinas... [more]
PTI1_SOLLC3.725e-4346.05Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
WAK1_ARATH4.865e-4345.28Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
LRKA3_ARATH4.865e-4343.58Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y1677_ARATH8.299e-4348.31Probable LRR receptor-like serine/threonine-protei... [more]
BRL2_ARATH8.299e-4344.75Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
CRK24_ARATH1.084e-4241.78Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK21_ARATH1.084e-4242.13Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CX32_ARATH1.416e-4242.08Probable serine/threonine-protein kinase Cx32, chl... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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