FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.849e-42
Identity = 95/215 (44.19%), Postives = 139/215 (64.65%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDG-DMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R +TY E+ + TN F     L EGGF  V+ G + D + VAVK    +S+QG ++F +EV++L    H N+V L+G+C E    +L+YEY+ NG+L  HL G + R PL W  R +IA   A+GL YLH  C+   ++HRD++  NIL+ ++F+  +GDFGL+R  P G +  V T V G+ GYL PEY ++  +TEK+DV+S GVVL+E+IT +
Sbjct:  579 RSYTYEEVAVITNNFERP--LGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPP-MIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQ 790          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.153e-42
Identity = 95/222 (42.79%), Postives = 138/222 (62.16%), Query Frame = 3
Query:   39 PVFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            P      R F+Y+++ + TN F     L +GGF  V+ G +   + VAVK    +SSQG ++F +EVE+L    H+N+V L+G+C E     L+YEY+ NG L  H+ G R+R  L W  R KI + +A+GL YLH  C+   +VHRD++  NIL+   FE  + DFGL+R +  +G+  V T V GT GYL PEY ++  +TEK+DVYS G++L+E+IT R
Sbjct:  559 PAIVTKNRRFSYSQVVIMTNNFQR--ILGKGGFGMVYHGFVNGTEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPP-MVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNR 777          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.153e-42
Identity = 85/210 (40.48%), Postives = 129/210 (61.43%), Query Frame = 3
Query:   69 TYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            TY  +  AT  FS +N +  GGF S ++  +    V AVK+  +   QGDQ+F +E+  L   +H N+VMLIG+   +    L+Y Y+  G+L   +  R +  +EW    KIA+  AR L YLHE+C    ++HRD++P+NIL+ +++   + DFGL++        V T V GTFGY+APEYA + +++EKADVYS G+VL+ELI+ +
Sbjct:  250 TYEIIVRATGYFSNSNCIGHGGFGSTYKAEVSPTNVFAVKRLSVGRFQGDQQFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFIKERSKAAIEWKVLHKIALDVARALSYLHEQCSPK-VLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDK 458          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 3.153e-42
Identity = 95/224 (42.41%), Postives = 140/224 (62.50%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPD----------GQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR--DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            F+ +EL+ AT  F   + + EGGF  V +G + +          G V+AVK+      QG +E+ +E+  L    H N+V LIG+C+E+  RLLVYE++  GSL++HL+ R     PL W+ R ++A+GAARGL +LH       +++RD + +NIL+  ++   + DFGLAR  P GD   V TRV+GT GY APEY  +G ++ K+DVYS GVVL+EL++GR
Sbjct:   56 FSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHN--AQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGR 277          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.379e-42
Identity = 83/217 (38.25%), Postives = 136/217 (62.67%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD-RDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGV------ETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F Y+ L+ ATN F+E+  L  GG+  V +G L DG+ +A+K+  ++  +   E  +E++V+S  QH+N+V L+G C  +    +VYE++ N SLD  L+  + +  L+W  RR I +G A GL YLHE C+   I+HRD++ +NIL+   ++P + DFGLA++ P+G   +       + + GT GY+APEY   G+++ K D YS GV+++E+ +G
Sbjct:  319 FEYSTLKKATNNFNESCKLGVGGYGEVFKGTLSDGREIAIKRLHVSGKKPRDEIHNEIDVISRCQHKNLVRLLGCCFTNMNSFIVYEFLANTSLDHILFNPEKKKELDWKKRRTIILGTAEGLEYLHETCK---IIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSG 532          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.025e-42
Identity = 93/214 (43.46%), Postives = 136/214 (63.55%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLAR-WQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R+F Y+E+   TN F     + +GGF  V+ GV+ +G+ VAVK     S+QG +EF +EV++L    H N+  L+G+C E    +L+YEY+ N +L  +L G+    L W  R KI++ AA+GL YLH  C+   IVHRD++P NIL+    +  + DFGL+R +  +G   + T V G+ GYL PEY  + Q+ EK+DVYSLGVVL+E+ITG+
Sbjct:  562 RYFKYSEVVNITNNFERV--IGKGGFGKVYHGVI-NGEQVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSFILSWEERLKISLDAAQGLEYLHNGCKPP-IVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQ 771          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.175e-42
Identity = 94/218 (43.12%), Postives = 129/218 (59.17%), Query Frame = 3
Query:   45 FGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP-LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F N    F Y  LE AT+ FS    L +GG  +V  G+LP+G+ VAVK+    +    +EF +EV ++S  QH+N+V L+G  +E    LLVYEY+ N SLD  L+   +   L WS R  I +G A GL YLH    V  I+HRD++ +N+L+     P + DFGLAR        + T + GT GY+APEY   GQ+TEKADVYS GV+++E+  G
Sbjct:  296 FNNSKTKFKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRDWVEEFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVR-IIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACG 512          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.565e-41
Identity = 96/238 (40.34%), Postives = 142/238 (59.66%), Query Frame = 3
Query:   30 HKAPVFGNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYK-------------LASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRL-LVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            +  P+  +  R FTY+E+   TN F++   + +GGF  V+ G L DG  +AVK                 +SSQ  +EF  E E+L    HRN+   +G+C +DGR + L+YEY+ NG+L  +L   + + L W  R  IA+ +A+GL YLH  CR   IVHRD++  NIL+  + E  + DFGL++  P+ D+  V T V+GT GY+ PEY  + ++ EK+DVYS G+VL+ELITG+
Sbjct:  545 YSGPLLPSGKRRFTYSEVSSITNNFNKV--IGKGGFGIVYLGSLEDGTEIAVKMINDSSFGKSKGSSSSSSSSQVSKEFQVEAELLLTVHHRNLASFVGYC-DDGRSMALIYEYMANGNLQDYLSSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPP-IVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGK 778          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.565e-41
Identity = 93/212 (43.87%), Postives = 132/212 (62.26%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FT   ++ ATN + E+  L +GG  +V++G+LPD  +VA+K+ +LA S+   +F  EV VLS   HRNVV ++G C+E    LLVYE+I NG+L  HL+G   D  L W  R +IA+  A  L YLH    +  I+HRD++  NIL+  +    V DFG ++  P     + T V GT GYL PEY  +G + EK+DVYS GVVL+EL++G+
Sbjct:  403 FTEEGMKEATNGYDESRILGQGGQGTVYKGILPDNTIVAIKKARLADSRQVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIP-IIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQ 613          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.044e-41
Identity = 95/215 (44.19%), Postives = 132/215 (61.40%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG-RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R FTY+E+   TN F     L +GGF  V+ G + + + VAVK    +SSQG +EF +EVE+L    H+N+V L+G+C E     L+YEY+ NG L  H+ G R    L W  R KI V +A+GL YLH  C+   +VHRD++  NIL+       + DFGL+R  P +G+  V T V GT GYL PEY ++  + EK+DVYS G+VL+E+IT +
Sbjct:  580 RRFTYSEVVTMTNNFERV--LGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRGGSILNWETRLKIVVESAQGLEYLHNGCKPP-MVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQ 791          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y4245_ARATH1.849e-4244.19Probable LRR receptor-like serine/threonine-protei... [more]
Y5182_ARATH3.153e-4242.79Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_ARATH3.153e-4240.48Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH3.153e-4242.41Probable serine/threonine-protein kinase NAK OS=Ar... [more]
CRK43_ARATH5.379e-4238.25Putative cysteine-rich receptor-like protein kinas... [more]
SIRK_ARATH7.025e-4243.46Senescence-induced receptor-like serine/threonine-... [more]
CRK42_ARATH9.175e-4243.12Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
Y4291_ARATH1.565e-4140.34Probable LRR receptor-like serine/threonine-protei... [more]
WAK3_ARATH1.565e-4143.87Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
RLK6_ARATH2.044e-4144.19Receptor-like protein kinase At3g21340 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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