FC920841

Overview
NameFC920841
Unique NameFC920841
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length698
Libraries
Library NameType
RVDevelop1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.554e-41
Identity = 96/217 (44.24%), Postives = 135/217 (62.21%), Query Frame = 3
Query:   72 YAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDR-------DPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVE-TRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            ++EL+ AT+ F   + + EG +  V+ GVL +    A+K+   ++ Q D EF ++V ++S  +H N V L+G+CV+   R+L YE+  NGSL   L+GR           L W  R KIAVGAARGL YLHE+     I+HRD++ +N+L+  D    + DF L+   PD    +  TRVLGTFGY APEYA +GQ+  K+DVYS GVVL+EL+TGR
Sbjct:   63 FSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLD-SNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPH-IIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGR 277          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.554e-41
Identity = 90/207 (43.48%), Postives = 132/207 (63.77%), Query Frame = 3
Query:  108 EANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQE---------FCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMG-VETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            E N + +G    V+R  + +G+V+AVK+   A   G  +         F +EV+ L   +H+N+V  +G C     RLL+Y+Y+ NGSL S L+ R    L+W  R +I +GAA+GL YLH +C +  IVHRD++ NNIL+  DFEP + DFGLA+   +GD+G     V G++GY+APEY  S +ITEK+DVYS GVV++E++TG+
Sbjct:  788 EPNVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGSSLDWDLRYRILLGAAQGLAYLHHDC-LPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGK 993          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.947e-41
Identity = 93/221 (42.08%), Postives = 140/221 (63.35%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQ--GDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRD---RDPLEWSARRKIAVGAARGLRYLHEECRVGC--IVHRDMRPNNILVTHDFEPLVGDFGLARWQP-DGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            R FTY ELE A + F E + + +G F  V++GVL DG  VAVK+  ++S +     EF +E+++LS   H +++ L+G+C E G RLLVYE++ +GSL +HL+G++   ++ L+W  R  IAV AARG+ YLH      C  ++HRD++ +NIL+  +    V DFGL+   P D    +     GT GYL PEY +   +T K+DVYS GV+L+E+++GR
Sbjct:  498 RVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLH---GYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGR 715          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.767e-41
Identity = 97/213 (45.54%), Postives = 132/213 (61.97%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDG-DMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            FTY+E++  TN F +A  L EGGF  V+ G +   + VAVK    +SSQG + F +EVE+L    H N+V L+G+C E     L+YEY+ NG L  HL G+     L W +R KI + AA GL YLH  C V  +VHRD++  NIL+    +  + DFGL+R  P G +  V T V GT GYL PEY Q+  +TEK+D+YS G+VL+E+I+ R
Sbjct:  567 FTYSEVQEMTNNFDKA--LGEGGFGVVYHGFVNVIEQVAVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHGGFVLSWESRLKIVLDAALGLEYLHTGC-VPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTPGYLDPEYYQTNWLTEKSDIYSFGIVLLEIISNR 776          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.014e-40
Identity = 92/209 (44.02%), Postives = 131/209 (62.68%), Query Frame = 3
Query:  108 EANFLAEGGFVSVHRGVLPDGQVVAVKQY----------KLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD-PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVL-GTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            E N + +G    V++  +P+ +V+AVK+           K  SS     F +EV+ L   +H+N+V  +G C     RLL+Y+Y+ NGSL S L+ R     L W  R KI +GAA+GL YLH +C V  IVHRD++ NNIL+  DFEP +GDFGLA+   DGD    +  + G++GY+APEY  S +ITEK+DVYS GVV++E++TG+
Sbjct:  787 EGNVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDC-VPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGK 994          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.014e-40
Identity = 93/212 (43.87%), Postives = 132/212 (62.26%), Query Frame = 3
Query:   69 TYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDP--LEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            T  EL  AT+ FS+AN +  GGF  V++  L +G  +AVK+        ++EF +EVEVLS A+H N+V L G+CV D  R+L+Y ++ NGSLD  L+     P  L+W  R  I  GA+ GL Y+H+ C    IVHRD++ +NIL+  +F+  V DFGL+R        V T ++GT GY+ PEY Q+   T + DVYS GVV++EL+TG+
Sbjct:  792 TIFELLKATDNFSQANIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPH-IVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGK 1002          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.325e-40
Identity = 93/225 (41.33%), Postives = 133/225 (59.11%), Query Frame = 3
Query:   48 GNPPRWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYG---RDRDPLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARW-----QPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITGR 698
            G   R FT  E+  ATN FS+ N +  GGF  V + VL DG + A+K+ KL +++G  +  +EV +L    HR++V L+G CV+    LL+YE+I NG+L  HL+G   R   PL W  R +IA   A GL YLH   +   I HRD++ +NIL+       V DFGL+R        + +  + T   GT GYL PEY ++ Q+T+K+DVYS GVVL+E++T +
Sbjct:  345 GKSSRIFTGREITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPP-IYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSK 568          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.730e-40
Identity = 96/214 (44.86%), Postives = 125/214 (58.41%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD--PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            R F   ELE AT  FSE   L  GG  +V++G+L DG+ VAVK+ K+      QEF +EV +LS   HR+VV L+G C+E    +LVYE+I NG+L  H++  + D   + W  R +IAV  A  L YLH       I HRD++  NIL+   +   V DFG +R          T + GT GY+ PEY QS Q TEK+DVYS GV+L ELITG
Sbjct:  439 RVFNSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSAS-SPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITG 651          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.730e-40
Identity = 96/214 (44.86%), Postives = 126/214 (58.88%), Query Frame = 3
Query:   60 RWFTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRD--PLEWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            R FT  ELE AT  FSE   L  GG  +V++G+L DG+ VAVK+ K+      QEF +EV +LS   HR+VV L+G C+E    +LVYE+I NG+L  H++  + D   + W  R +IAV  A  L YLH       I HRD++  NIL+   +   V DFG +R          T + GT GY+ PEY +S Q TEK+DVYS GV+L ELITG
Sbjct:  430 RIFTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAAS-SPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITG 642          
BLAST of FC920841 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.730e-40
Identity = 93/212 (43.87%), Postives = 128/212 (60.38%), Query Frame = 3
Query:   66 FTYAELELATNRFSEANFLAEGGFVSVHRGVLPDGQVVAVKQYKLASSQGDQEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRDRDPL--EWSARRKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEPLVGDFGLARWQPDGDMGVETRVLGTFGYLAPEYAQSGQITEKADVYSLGVVLVELITG 695
            F+  ELE AT  FS    L +GG  +V++G+L DG++VAVK+ K+      +EF +EV +LS   HRN+V L+G C+E    +LVYE+I NG+L  HL+    + +   W+ R +IA+  A  L YLH       I HRD++  NI++   +   V DFG +R        + T V GT GY+ PEY QS Q T+K+DVYS GVVLVELITG
Sbjct:  435 FSSRELEKATENFSSNRILGQGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSAS-SPIYHRDVKSTNIMLDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITG 645          
The following BLAST results are available for this feature:
BLAST of FC920841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2706_ARATH4.554e-4144.24Probable receptor-like protein kinase At2g47060 OS... [more]
RCH2_ARATH4.554e-4143.48Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
ACR4_ARATH5.947e-4142.08Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y2899_ARATH7.767e-4145.54Probable leucine-rich repeat receptor-like protein... [more]
RCH1_ARATH1.014e-4044.02LRR receptor-like serine/threonine-protein kinase ... [more]
PSYR1_ARATH1.014e-4043.87Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
WAKLQ_ARATH1.325e-4041.33Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLN_ARATH1.730e-4044.86Wall-associated receptor kinase-like 18 OS=Arabido... [more]
WAKLM_ARATH1.730e-4044.86Wall-associated receptor kinase-like 17 OS=Arabido... [more]
WAKLH_ARATH1.730e-4043.87Wall-associated receptor kinase-like 9 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionC32013F10EF RVDevelop1 Citrus clementina cDNA clone C32013F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC920841 ID=FC920841; Name=FC920841; organism=Citrus clementina; type=EST; length=698bp
GTCCTCCTCCATTGTGTTCAACATGTCAGCACAAGGCACCTGTATTTGGT
AATCCTCCGAGGTGGTTCACCTATGCTGAATTGGAGCTTGCTACAAATAG
ATTTTCAGAAGCAAATTTCTTAGCCGAAGGTGGATTTGTGTCTGTTCACC
GAGGTGTTCTACCAGATGGCCAGGTTGTTGCCGTCAAGCAATATAAATTG
GCTAGTTCTCAAGGTGATCAAGAATTTTGCTCAGAAGTTGAGGTTTTAAG
TTGTGCACAACATCGCAATGTTGTGATGTTGATTGGATTCTGTGTGGAGG
ATGGGAGGAGATTGCTGGTTTATGAGTATATTTGCAATGGGTCCTTGGAT
TCCCATCTTTATGGACGTGATCGAGATCCACTGGAATGGTCTGCAAGGCG
AAAAATTGCGGTTGGAGCAGCTCGAGGGTTGCGATACCTTCATGAAGAAT
GTAGAGTGGGTTGTATCGTCCACCGTGATATGCGCCCTAACAACATTCTG
GTCACCCATGATTTTGAGCCACTGGTTGGGGATTTTGGACTAGCAAGATG
GCAACCAGATGGAGATATGGGAGTGGAAACAAGAGTACTCGGAACATTTG
GGTATTTAGCTCCAGAATATGCTCAGAGTGGTCAAATCACAGAAAAAGCT
GACGTCTATTCCCTTGGGGTAGTATTGGTGGAGCTCATTACNGGAAGG
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